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The map label for this gene is hrtB [H]

Identifier: 38234858

GI number: 38234858

Start: 2426551

End: 2427585

Strand: Reverse

Name: hrtB [H]

Synonym: DIP2324

Alternate gene names: 38234858

Gene position: 2427585-2426551 (Counterclockwise)

Preceding gene: 38234859

Following gene: 38234857

Centisome position: 97.55

GC content: 56.91

Gene sequence:

>1035_bases
ATGTTTTTAGGAATCCGCGACATTCGTGCCGCAGCAGGGCGTTTTGCCCTGATCGCATCGGTTGTTGGTTTGATTACTCT
GTTGATCGTTATGCTGACCGGCCTCACCCAAGGCTTAGGTAAACAAAACACCTCAGCCATCGAAGCGCTCGCACCACACA
GCGTAGTATTTACCACTGCTGGTGGTTCTTCCCCAGAGTTCACTTCCTCGGAAATCTCCGAACAGCAGGCAGAACGTTGG
AAGGACTCCACTCCCCTTGGTGTTTCCCAAACCCGTATCGAATCGGACCAAAACGCCAACACCACCGCCGTGATGGGACT
ACCTGAGGGGACTCCACTCCCCGACTCCGTAGGCGGCTTCATTGAACAAGGTGCACTGCTCCCCGCAGAGCTCGCTGACT
TTCTGCACGTACGCGCAGGTGACCACATCACCCTTGGTGGTGCCACCGTCACCGTTGCCGGCACCGTAAAAACCGAAAAC
TACAGCCATACCCCCGTGGTTTGGGTCGACACTGCTACTTGGCAGCTGGTCAGCCACACTAAGGCTGTGGGGACAGTACT
GCTCCTCAACCAAGAGCCAACTATCCAGCCTCAAGACAATGAGGTAGTCACCGACCTCAAAGGCGCATTCCAAGCAATGC
CCGCCTACAAGTCGGAGCGTTCTTCTCTGCTAAGCATGCAGGCATTCTTATACATCATTTCTGCATTGGTCACGGTGGCC
TTCCTTACTGTATGGACCCTGCAACGTACCCGCGACATTGCCGTGCTCGCCGCGTTGGGAGCGTCGAAACGCTACCTGCT
TATCGACGCCCTCGGCCAGGCCGCCATCATCCTCGCCGCAGGCGTAGCCCTCGGTGCTGGTATCGGCGCCCTCCTTGGAT
GGCTCATAGCAGGCAGTGTGCCATTCTCGCTCGGATGGGTATCCGTACTCGGCCCAGCGTTAGGCATCTGGCTACTCGGC
CTCATCGGAGCCACCATCGCCGTCCGCAACGTCACCAAAGTCGATCCTCAGATTGCATTAGGAGCAACAGCATGA

Upstream 100 bases:

>100_bases
ATGTCATATCAACCAGTCGGTTGATGGGAGTTTCACCACGCCAACTGATGGAATAGCTCCTTACTTTCACAACAATAGAA
GTGAAAATAAGGAGCAGATC

Downstream 100 bases:

>100_bases
GCGCCGCACCGGTTCTCTCCATCACCAACGCCAGCGTGGTCTACCCCGACGGCATCTCGACAGTCACCGCCCTCGACTCC
GCCAACGTGGAAATATTCCC

Product: ABC transporter inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MFLGIRDIRAAAGRFALIASVVGLITLLIVMLTGLTQGLGKQNTSAIEALAPHSVVFTTAGGSSPEFTSSEISEQQAERW
KDSTPLGVSQTRIESDQNANTTAVMGLPEGTPLPDSVGGFIEQGALLPAELADFLHVRAGDHITLGGATVTVAGTVKTEN
YSHTPVVWVDTATWQLVSHTKAVGTVLLLNQEPTIQPQDNEVVTDLKGAFQAMPAYKSERSSLLSMQAFLYIISALVTVA
FLTVWTLQRTRDIAVLAALGASKRYLLIDALGQAAIILAAGVALGAGIGALLGWLIAGSVPFSLGWVSVLGPALGIWLLG
LIGATIAVRNVTKVDPQIALGATA

Sequences:

>Translated_344_residues
MFLGIRDIRAAAGRFALIASVVGLITLLIVMLTGLTQGLGKQNTSAIEALAPHSVVFTTAGGSSPEFTSSEISEQQAERW
KDSTPLGVSQTRIESDQNANTTAVMGLPEGTPLPDSVGGFIEQGALLPAELADFLHVRAGDHITLGGATVTVAGTVKTEN
YSHTPVVWVDTATWQLVSHTKAVGTVLLLNQEPTIQPQDNEVVTDLKGAFQAMPAYKSERSSLLSMQAFLYIISALVTVA
FLTVWTLQRTRDIAVLAALGASKRYLLIDALGQAAIILAAGVALGAGIGALLGWLIAGSVPFSLGWVSVLGPALGIWLLG
LIGATIAVRNVTKVDPQIALGATA
>Mature_344_residues
MFLGIRDIRAAAGRFALIASVVGLITLLIVMLTGLTQGLGKQNTSAIEALAPHSVVFTTAGGSSPEFTSSEISEQQAERW
KDSTPLGVSQTRIESDQNANTTAVMGLPEGTPLPDSVGGFIEQGALLPAELADFLHVRAGDHITLGGATVTVAGTVKTEN
YSHTPVVWVDTATWQLVSHTKAVGTVLLLNQEPTIQPQDNEVVTDLKGAFQAMPAYKSERSSLLSMQAFLYIISALVTVA
FLTVWTLQRTRDIAVLAALGASKRYLLIDALGQAAIILAAGVALGAGIGALLGWLIAGSVPFSLGWVSVLGPALGIWLLG
LIGATIAVRNVTKVDPQIALGATA

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 35843; Mature: 35843

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLGIRDIRAAAGRFALIASVVGLITLLIVMLTGLTQGLGKQNTSAIEALAPHSVVFTTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEC
GGSSPEFTSSEISEQQAERWKDSTPLGVSQTRIESDQNANTTAVMGLPEGTPLPDSVGGF
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
IEQGALLPAELADFLHVRAGDHITLGGATVTVAGTVKTENYSHTPVVWVDTATWQLVSHT
HHCCCCCHHHHHHHHHHCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEECCHHHHHHHH
KAVGTVLLLNQEPTIQPQDNEVVTDLKGAFQAMPAYKSERSSLLSMQAFLYIISALVTVA
HHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLTVWTLQRTRDIAVLAALGASKRYLLIDALGQAAIILAAGVALGAGIGALLGWLIAGSV
HHHHHHHHHHHHEHEEEECCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFSLGWVSVLGPALGIWLLGLIGATIAVRNVTKVDPQIALGATA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEECCCCC
>Mature Secondary Structure
MFLGIRDIRAAAGRFALIASVVGLITLLIVMLTGLTQGLGKQNTSAIEALAPHSVVFTTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEC
GGSSPEFTSSEISEQQAERWKDSTPLGVSQTRIESDQNANTTAVMGLPEGTPLPDSVGGF
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
IEQGALLPAELADFLHVRAGDHITLGGATVTVAGTVKTENYSHTPVVWVDTATWQLVSHT
HHCCCCCHHHHHHHHHHCCCCEEEECCEEEEEEEEEEECCCCCCCEEEEECCHHHHHHHH
KAVGTVLLLNQEPTIQPQDNEVVTDLKGAFQAMPAYKSERSSLLSMQAFLYIISALVTVA
HHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLTVWTLQRTRDIAVLAALGASKRYLLIDALGQAAIILAAGVALGAGIGALLGWLIAGSV
HHHHHHHHHHHHEHEEEECCCCCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFSLGWVSVLGPALGIWLLGLIGATIAVRNVTKVDPQIALGATA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA