| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234859
Identifier: 38234859
GI number: 38234859
Start: 2427721
End: 2430360
Strand: Reverse
Name: 38234859
Synonym: DIP2325
Alternate gene names: NA
Gene position: 2430360-2427721 (Counterclockwise)
Preceding gene: 38234862
Following gene: 38234858
Centisome position: 97.66
GC content: 51.02
Gene sequence:
>2640_bases ATGAAAATAATTACCGATAATTTCATGAAAGTGTGTTTGATGAAAATCCCTCACCGTCGATTAGTAGGAGCTGCGGCTAC TTGCTTCCTTGTGACTGGACTTGCCTCACTCCCCCCTACCGCCCTAGCTGGCCCAGATCAGAACAAACACACCGTTTACG GCACACATATGGATCTCTCACCTGAAGCTGCTGTTACTGGTGCTAACCATAACTTGGAGGGCGAAGATGATGGGGATGGT GGCAAGGAGATCACTGGCCTTGGCGTTGTGCTAGGTCTGAGAAAGGTAAATGAAGAAACCGCCGAATATAAAGGCTTGCC AGCCGATAATGCTGTTATGTGGCTACCGCGATCTGGTTACTATCGGTTTAACTCCACTGAGCAAACTCCCTTTGTAGCAA AACAAGGTGATACCGTGTGGCAGGCTCCACAGAATGTGGATGCTAGCCAGTTACCTATCTACTTTGGCTATAATAGTGGC TCCCACATTCAAAAAGCTGCTGATAATGAAGAGCTACAAAATCAGAACTACTCTCTTGACCTTTTGAAAGTAGAAGGGCC AGGGGACGTAGAAGTTTTCACTCAAACAGCGTTGCGTGCCACTCGAATTTTCTCCAGCAAAGATAAGGCATTCCGTTCAC TGATTAAGCCGCGTCACTCGCACTACCACACCACTTTTACCAAGCCTGGTCGCTACGTGTTCACCTACCAAGCCACCGCA TATGACAGCGAGGGTGAGCCCATTAAGACCATGCCTATGAATTTGGCATGGCAAGTAGGTGGCGAACAGCCGGACAAGGG AAAGATCCTCGACCCAGCACAGGCATGGGAGAAAGCTACTAAGGGGGAGGTATCGGCAAGCTTGTCCCTTAAGCCTAGTG AGAACAAAAACACCGAGATCGCGTTTAAGGGATCCGGCAACGGTCGCCTCGTCTTGCTTATCGATGGCCATTTCCTCGAC GAGCTCCCTGTCACCGGTGGCACCGCGAAGTCCACCACTTTCCTTGGCGAGGGATCCTCTAAGTACCAAGCGCTGTTCAT TCCTGATGATTACTCCAAGCCAGCATGGCTTTCCGAGTCTTTCACCTACGATCGCAAGGACTCCAAGAATATCTCAGAGA CAGGCTCCGAACTGGTAAAGCCGAAGGAAATTGATAAAGAGCGTGTGTGGGATCCACAACCAATATCATTGGAAGATACC AATGTCAGGGTGTCTATAAAGCCCAAGGATGGAAAACACATCTTGACGCTGCAAGGCGATAAGAAGTTGCGAGGTTTTGC CTCAATTAAAATGTTTTCCTCAAATTCCACAATTGGTGCGCCGGCATGTAGTACAGAGGGGCACTTCGACGAAAATGGAA AGATCGAACAGGAATGGGATATCTCCGCGTGTGAGGATTTTAAACCATGGTTGCATGTTACTGTCATTCCTCATCCATTG ATCGATGTGAAGTCGATTGACTCCAAAGCGGAAGAGATTGATTTAAGCAAGTCCATAGAGAAAGACTACAAGTTCGAGGA GCTGGACGAGAAGAAAGCCCCCGAGCAGATAGAAACCTTCGGTTCCTTCAAACGCGGCGACGACGTGAAGAACATCCCGC TGATGAAGCACGAAGACGAGGCCGACACTGATGACAGCGACGACTCTGAGAGTGTAGACACCGAAGATACCGGTGACGAC ACGGAAACCAATAAAAACGGTAATGGCAAGGATACTGACCCGTCTTCTCCATCATCACCGTCGTCGCAATCATCTGAGGA ACACAAGGAACCTACCGTTGCCCATAAACATGAGCTGACCGAGGGACATATTGACATCCGCCTTGCTAAGAACAACGGTA AAGTGGGCTTTAACCTGAATCATGAGCATGTACAGCGTTCCCTCGACGACACCATCATTCGAGTACGTGACAATGCACGC CAGAAGCGTGATAACAAGCTTGGCGACGAGAAGTGGGACTTCCTAGGCCCTGTAGGTGAGAAGTTCTACATTCTGCCTAG CAGCGAGGAACCAGGTAAGCCATGGCCAGGATTCAGCTCGGAGGACCTGAACTACAAGCACTACCCGCAGGGTGTGGACA TCACCTTGGATCATGCCGAAACCCCAGACGGTGGGCGTGCAGTGTTCTACCAAGCTGATCCGCTAACCGGCGAGGTTAAG CGCATGCTCGACACCGGTGACGAGGACACGCGCACACTGAGCACCACCAAACCGCTGCACCTGCACGGCAACTGGTCCTT TAACAAACCAGGGCAATACACCCTGTATTTCAAGGCCACAAGTGGCGACAAGGAAATCGCAGCACCACAGCCCGTGACGT TCCTCGTGGGCGATAACGCCACCGCGCAGCAGCCAACAGGCGAAGACGTGTCGGGTAAAGCCGGTAAAGCAGGAAAAGAA AGCAAGAAGGCAGAAAAAGTAGCTGTGCACCCTGTTGCAAAGTCCAGTGAGCCCAAGACTGCTGGGAAGAGCGGTGACTC TAAGTCACCGAAGAAGGAAGATCCGAACGTGAAGAAGTCTGCAATTAAGCAGAAACTCGCGGAGACGGGTTCCTACGCTG ACCTGCTGCTTCCGGCCGCATTGGCGTTCTTTGGTATCGGTTTTGCGGTACTGGGCTTGGTGAGGATGCGCCGCCAGTAG
Upstream 100 bases:
>100_bases AGCGAGCATAAAAGATCTCCTGCGCCTGTGATGGATTGGAAGGAAAGTTCGCTTAATTGAAGCCTATGTTGCATAGGAGC AAATTAGGCTATACCTTTTA
Downstream 100 bases:
>100_bases GCGCTGTTTAGTAAAGCGCACGATCTAGCCTACTGATGTCATATCAACCAGTCGGTTGATGGGAGTTTCACCACGCCAAC TGATGGAATAGCTCCTTACT
Product: putative surface-anchored protein
Products: NA
Alternate protein names: LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; TRNA-Dihydrouridine Synthase; Surface-Anchored Protein
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLSPEAAVTGANHNLEGEDDGDG GKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGYYRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSG SHIQKAADNEELQNQNYSLDLLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEIAFKGSGNGRLVLLIDGHFLD ELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSESFTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDT NVRVSIKPKDGKHILTLQGDKKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDEADTDDSDDSESVDTEDTGDD TETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELTEGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNAR QKRDNKLGDEKWDFLGPVGEKFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNATAQQPTGEDVSGKAGKAGKE SKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKSAIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ
Sequences:
>Translated_879_residues MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLSPEAAVTGANHNLEGEDDGDG GKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGYYRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSG SHIQKAADNEELQNQNYSLDLLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEIAFKGSGNGRLVLLIDGHFLD ELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSESFTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDT NVRVSIKPKDGKHILTLQGDKKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDEADTDDSDDSESVDTEDTGDD TETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELTEGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNAR QKRDNKLGDEKWDFLGPVGEKFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNATAQQPTGEDVSGKAGKAGKE SKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKSAIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ >Mature_879_residues MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLSPEAAVTGANHNLEGEDDGDG GKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGYYRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSG SHIQKAADNEELQNQNYSLDLLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEIAFKGSGNGRLVLLIDGHFLD ELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSESFTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDT NVRVSIKPKDGKHILTLQGDKKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDEADTDDSDDSESVDTEDTGDD TETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELTEGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNAR QKRDNKLGDEKWDFLGPVGEKFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNATAQQPTGEDVSGKAGKAGKE SKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKSAIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96732; Mature: 96732
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLS CCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC PEAAVTGANHNLEGEDDGDGGKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGY CCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHCCCCCCCEEEEEECCCC YRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSGSHIQKAADNEELQNQNYSLD EEECCCCCCCEEECCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHCCCCEEE LLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA EEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEE YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEI ECCCCCCEEECCCEEEEEECCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCCCCEE AFKGSGNGRLVLLIDGHFLDELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSES EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC FTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDTNVRVSIKPKDGKHILTLQGD CCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCEECCEEEEEEECCCCCEEEEEECC KKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDE CCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEECCCC ADTDDSDDSESVDTEDTGDDTETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCC EGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNARQKRDNKLGDEKWDFLGPVGE CCEEEEEEECCCCEEEECCCHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCHHHCCCCCC KFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHH RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNA HHHHCCCCCCEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC TAQQPTGEDVSGKAGKAGKESKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKS CCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH AIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLS CCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC PEAAVTGANHNLEGEDDGDGGKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGY CCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHCCCCCCCEEEEEECCCC YRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSGSHIQKAADNEELQNQNYSLD EEECCCCCCCEEECCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHCCCCEEE LLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA EEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEE YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEI ECCCCCCEEECCCEEEEEECCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCCCCEE AFKGSGNGRLVLLIDGHFLDELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSES EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC FTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDTNVRVSIKPKDGKHILTLQGD CCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCEECCEEEEEEECCCCCEEEEEECC KKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDE CCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEECCCC ADTDDSDDSESVDTEDTGDDTETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCC EGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNARQKRDNKLGDEKWDFLGPVGE CCEEEEEEECCCCEEEECCCHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCHHHCCCCCC KFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHH RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNA HHHHCCCCCCEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC TAQQPTGEDVSGKAGKAGKESKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKS CCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH AIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA