Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

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The map label for this gene is 38234859

Identifier: 38234859

GI number: 38234859

Start: 2427721

End: 2430360

Strand: Reverse

Name: 38234859

Synonym: DIP2325

Alternate gene names: NA

Gene position: 2430360-2427721 (Counterclockwise)

Preceding gene: 38234862

Following gene: 38234858

Centisome position: 97.66

GC content: 51.02

Gene sequence:

>2640_bases
ATGAAAATAATTACCGATAATTTCATGAAAGTGTGTTTGATGAAAATCCCTCACCGTCGATTAGTAGGAGCTGCGGCTAC
TTGCTTCCTTGTGACTGGACTTGCCTCACTCCCCCCTACCGCCCTAGCTGGCCCAGATCAGAACAAACACACCGTTTACG
GCACACATATGGATCTCTCACCTGAAGCTGCTGTTACTGGTGCTAACCATAACTTGGAGGGCGAAGATGATGGGGATGGT
GGCAAGGAGATCACTGGCCTTGGCGTTGTGCTAGGTCTGAGAAAGGTAAATGAAGAAACCGCCGAATATAAAGGCTTGCC
AGCCGATAATGCTGTTATGTGGCTACCGCGATCTGGTTACTATCGGTTTAACTCCACTGAGCAAACTCCCTTTGTAGCAA
AACAAGGTGATACCGTGTGGCAGGCTCCACAGAATGTGGATGCTAGCCAGTTACCTATCTACTTTGGCTATAATAGTGGC
TCCCACATTCAAAAAGCTGCTGATAATGAAGAGCTACAAAATCAGAACTACTCTCTTGACCTTTTGAAAGTAGAAGGGCC
AGGGGACGTAGAAGTTTTCACTCAAACAGCGTTGCGTGCCACTCGAATTTTCTCCAGCAAAGATAAGGCATTCCGTTCAC
TGATTAAGCCGCGTCACTCGCACTACCACACCACTTTTACCAAGCCTGGTCGCTACGTGTTCACCTACCAAGCCACCGCA
TATGACAGCGAGGGTGAGCCCATTAAGACCATGCCTATGAATTTGGCATGGCAAGTAGGTGGCGAACAGCCGGACAAGGG
AAAGATCCTCGACCCAGCACAGGCATGGGAGAAAGCTACTAAGGGGGAGGTATCGGCAAGCTTGTCCCTTAAGCCTAGTG
AGAACAAAAACACCGAGATCGCGTTTAAGGGATCCGGCAACGGTCGCCTCGTCTTGCTTATCGATGGCCATTTCCTCGAC
GAGCTCCCTGTCACCGGTGGCACCGCGAAGTCCACCACTTTCCTTGGCGAGGGATCCTCTAAGTACCAAGCGCTGTTCAT
TCCTGATGATTACTCCAAGCCAGCATGGCTTTCCGAGTCTTTCACCTACGATCGCAAGGACTCCAAGAATATCTCAGAGA
CAGGCTCCGAACTGGTAAAGCCGAAGGAAATTGATAAAGAGCGTGTGTGGGATCCACAACCAATATCATTGGAAGATACC
AATGTCAGGGTGTCTATAAAGCCCAAGGATGGAAAACACATCTTGACGCTGCAAGGCGATAAGAAGTTGCGAGGTTTTGC
CTCAATTAAAATGTTTTCCTCAAATTCCACAATTGGTGCGCCGGCATGTAGTACAGAGGGGCACTTCGACGAAAATGGAA
AGATCGAACAGGAATGGGATATCTCCGCGTGTGAGGATTTTAAACCATGGTTGCATGTTACTGTCATTCCTCATCCATTG
ATCGATGTGAAGTCGATTGACTCCAAAGCGGAAGAGATTGATTTAAGCAAGTCCATAGAGAAAGACTACAAGTTCGAGGA
GCTGGACGAGAAGAAAGCCCCCGAGCAGATAGAAACCTTCGGTTCCTTCAAACGCGGCGACGACGTGAAGAACATCCCGC
TGATGAAGCACGAAGACGAGGCCGACACTGATGACAGCGACGACTCTGAGAGTGTAGACACCGAAGATACCGGTGACGAC
ACGGAAACCAATAAAAACGGTAATGGCAAGGATACTGACCCGTCTTCTCCATCATCACCGTCGTCGCAATCATCTGAGGA
ACACAAGGAACCTACCGTTGCCCATAAACATGAGCTGACCGAGGGACATATTGACATCCGCCTTGCTAAGAACAACGGTA
AAGTGGGCTTTAACCTGAATCATGAGCATGTACAGCGTTCCCTCGACGACACCATCATTCGAGTACGTGACAATGCACGC
CAGAAGCGTGATAACAAGCTTGGCGACGAGAAGTGGGACTTCCTAGGCCCTGTAGGTGAGAAGTTCTACATTCTGCCTAG
CAGCGAGGAACCAGGTAAGCCATGGCCAGGATTCAGCTCGGAGGACCTGAACTACAAGCACTACCCGCAGGGTGTGGACA
TCACCTTGGATCATGCCGAAACCCCAGACGGTGGGCGTGCAGTGTTCTACCAAGCTGATCCGCTAACCGGCGAGGTTAAG
CGCATGCTCGACACCGGTGACGAGGACACGCGCACACTGAGCACCACCAAACCGCTGCACCTGCACGGCAACTGGTCCTT
TAACAAACCAGGGCAATACACCCTGTATTTCAAGGCCACAAGTGGCGACAAGGAAATCGCAGCACCACAGCCCGTGACGT
TCCTCGTGGGCGATAACGCCACCGCGCAGCAGCCAACAGGCGAAGACGTGTCGGGTAAAGCCGGTAAAGCAGGAAAAGAA
AGCAAGAAGGCAGAAAAAGTAGCTGTGCACCCTGTTGCAAAGTCCAGTGAGCCCAAGACTGCTGGGAAGAGCGGTGACTC
TAAGTCACCGAAGAAGGAAGATCCGAACGTGAAGAAGTCTGCAATTAAGCAGAAACTCGCGGAGACGGGTTCCTACGCTG
ACCTGCTGCTTCCGGCCGCATTGGCGTTCTTTGGTATCGGTTTTGCGGTACTGGGCTTGGTGAGGATGCGCCGCCAGTAG

Upstream 100 bases:

>100_bases
AGCGAGCATAAAAGATCTCCTGCGCCTGTGATGGATTGGAAGGAAAGTTCGCTTAATTGAAGCCTATGTTGCATAGGAGC
AAATTAGGCTATACCTTTTA

Downstream 100 bases:

>100_bases
GCGCTGTTTAGTAAAGCGCACGATCTAGCCTACTGATGTCATATCAACCAGTCGGTTGATGGGAGTTTCACCACGCCAAC
TGATGGAATAGCTCCTTACT

Product: putative surface-anchored protein

Products: NA

Alternate protein names: LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; TRNA-Dihydrouridine Synthase; Surface-Anchored Protein

Number of amino acids: Translated: 879; Mature: 879

Protein sequence:

>879_residues
MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLSPEAAVTGANHNLEGEDDGDG
GKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGYYRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSG
SHIQKAADNEELQNQNYSLDLLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA
YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEIAFKGSGNGRLVLLIDGHFLD
ELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSESFTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDT
NVRVSIKPKDGKHILTLQGDKKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL
IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDEADTDDSDDSESVDTEDTGDD
TETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELTEGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNAR
QKRDNKLGDEKWDFLGPVGEKFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK
RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNATAQQPTGEDVSGKAGKAGKE
SKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKSAIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ

Sequences:

>Translated_879_residues
MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLSPEAAVTGANHNLEGEDDGDG
GKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGYYRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSG
SHIQKAADNEELQNQNYSLDLLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA
YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEIAFKGSGNGRLVLLIDGHFLD
ELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSESFTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDT
NVRVSIKPKDGKHILTLQGDKKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL
IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDEADTDDSDDSESVDTEDTGDD
TETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELTEGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNAR
QKRDNKLGDEKWDFLGPVGEKFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK
RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNATAQQPTGEDVSGKAGKAGKE
SKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKSAIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ
>Mature_879_residues
MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLSPEAAVTGANHNLEGEDDGDG
GKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGYYRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSG
SHIQKAADNEELQNQNYSLDLLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA
YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEIAFKGSGNGRLVLLIDGHFLD
ELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSESFTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDT
NVRVSIKPKDGKHILTLQGDKKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL
IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDEADTDDSDDSESVDTEDTGDD
TETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELTEGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNAR
QKRDNKLGDEKWDFLGPVGEKFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK
RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNATAQQPTGEDVSGKAGKAGKE
SKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKSAIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 96732; Mature: 96732

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLS
CCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
PEAAVTGANHNLEGEDDGDGGKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGY
CCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHCCCCCCCEEEEEECCCC
YRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSGSHIQKAADNEELQNQNYSLD
EEECCCCCCCEEECCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHCCCCEEE
LLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA
EEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEE
YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEI
ECCCCCCEEECCCEEEEEECCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCCCCEE
AFKGSGNGRLVLLIDGHFLDELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSES
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC
FTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDTNVRVSIKPKDGKHILTLQGD
CCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCEECCEEEEEEECCCCCEEEEEECC
KKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDE
CCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEECCCC
ADTDDSDDSESVDTEDTGDDTETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCC
EGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNARQKRDNKLGDEKWDFLGPVGE
CCEEEEEEECCCCEEEECCCHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCHHHCCCCCC
KFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHH
RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNA
HHHHCCCCCCEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC
TAQQPTGEDVSGKAGKAGKESKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKS
CCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIITDNFMKVCLMKIPHRRLVGAAATCFLVTGLASLPPTALAGPDQNKHTVYGTHMDLS
CCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
PEAAVTGANHNLEGEDDGDGGKEITGLGVVLGLRKVNEETAEYKGLPADNAVMWLPRSGY
CCCEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCHHHHHHCCCCCCCEEEEEECCCC
YRFNSTEQTPFVAKQGDTVWQAPQNVDASQLPIYFGYNSGSHIQKAADNEELQNQNYSLD
EEECCCCCCCEEECCCCEEECCCCCCCCCCCCEEEECCCCCHHHHHCCHHHHHCCCCEEE
LLKVEGPGDVEVFTQTALRATRIFSSKDKAFRSLIKPRHSHYHTTFTKPGRYVFTYQATA
EEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEE
YDSEGEPIKTMPMNLAWQVGGEQPDKGKILDPAQAWEKATKGEVSASLSLKPSENKNTEI
ECCCCCCEEECCCEEEEEECCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCCCCCEE
AFKGSGNGRLVLLIDGHFLDELPVTGGTAKSTTFLGEGSSKYQALFIPDDYSKPAWLSES
EEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC
FTYDRKDSKNISETGSELVKPKEIDKERVWDPQPISLEDTNVRVSIKPKDGKHILTLQGD
CCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCCEECCEEEEEEECCCCCEEEEEECC
KKLRGFASIKMFSSNSTIGAPACSTEGHFDENGKIEQEWDISACEDFKPWLHVTVIPHPL
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
IDVKSIDSKAEEIDLSKSIEKDYKFEELDEKKAPEQIETFGSFKRGDDVKNIPLMKHEDE
CCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCEECCCC
ADTDDSDDSESVDTEDTGDDTETNKNGNGKDTDPSSPSSPSSQSSEEHKEPTVAHKHELT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHCCC
EGHIDIRLAKNNGKVGFNLNHEHVQRSLDDTIIRVRDNARQKRDNKLGDEKWDFLGPVGE
CCEEEEEEECCCCEEEECCCHHHHHHHHHHHEEEEHHHHHHHHHCCCCCCCHHHCCCCCC
KFYILPSSEEPGKPWPGFSSEDLNYKHYPQGVDITLDHAETPDGGRAVFYQADPLTGEVK
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHH
RMLDTGDEDTRTLSTTKPLHLHGNWSFNKPGQYTLYFKATSGDKEIAAPQPVTFLVGDNA
HHHHCCCCCCEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCC
TAQQPTGEDVSGKAGKAGKESKKAEKVAVHPVAKSSEPKTAGKSGDSKSPKKEDPNVKKS
CCCCCCCCCCCCCCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH
AIKQKLAETGSYADLLLPAALAFFGIGFAVLGLVRMRRQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA