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The map label for this gene is yidA [H]

Identifier: 38234775

GI number: 38234775

Start: 2329111

End: 2329938

Strand: Reverse

Name: yidA [H]

Synonym: DIP2239

Alternate gene names: 38234775

Gene position: 2329938-2329111 (Counterclockwise)

Preceding gene: 38234776

Following gene: 38234774

Centisome position: 93.62

GC content: 57.85

Gene sequence:

>828_bases
ATGAGCGCACTTATTGTCAGCGATATCGACGGAACGCTCATCGACTCTCGGGAACGCATCCCCAGTGCTGTGAAGGAGTC
GCTTGCGGCTGCTCAACGCGCTGGGGTGTCTTTCGTTGTGGCCACGGGGCGGCCCGCACGCTGGATCCACCCGATCATCG
ATCAGCTATACACCCCACCTACACTGTGTGTTTGTGCTAATGGTGCGGTGATTTATGATCCCGCATGTGATAGCATTACG
CATCGTCGTGAGTTGGCCCCCGATGCGATGCGTACCGTGGTGCGCGTTGCCCGCGAGGCACTTAGCGATCTCGGCGGTTG
CGGTGTGGGAGTAGAACGCGCAGGGGTTTCTGCGCATGACATGCCTGGTGAACTCTTCATGGTTACCCCAGATTTTGTGC
ACTCGTGGGAGTCCATTGAGCATTCCACTGTGGAGCTTGATCGGGTGTTAGCGCGTTCTGCGGTGAAGCTGTTGTTGCGC
AATGATGCGCTGACATCGGAGCAGATGCATCGCTTGGTTGCCCCCGTAGTACCCGCAGATGTGGCCCATGTGACCTATTC
CATGCCGGACGGTTTGTTGGAGGTTATGCAGCCTGGGGTGAATAAGTCTTCGGCGTTGGACGTGGTGGCGCAAGACCTTG
GTGTGGATCCTGCGGATGCGATTGCGTTTGGTGATATGCTCAATGACCTTGAGATGATTCGTTGGGCGGGCACTGGCGTT
GCGATGGGTAATGCGTGCGATCAGTTGCAGCGTGCCGCTGATGTGGTGGCTCCGACGAACGATGAGGCAGGCATTGCGGT
GGTATTGCGGGAGTGGCTGCAGGGGTAG

Upstream 100 bases:

>100_bases
ATGGCTCGGTGATCGTTCCTGAGGCACTGCGCCCATTCGTGGGCAAGGAAGTACTCGAGCCAAAGAAGTAATTTCCCAGC
GAAAAGATACAAGGAGAGCG

Downstream 100 bases:

>100_bases
CAACCCCGTAACATGGCAGGCATGTTCCAAGATCTTTTGTACCTCAACCTAATTGGTGCTGTGCGCGCGATCACGGCTGC
CCAGGGCATCAAGATCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSALIVSDIDGTLIDSRERIPSAVKESLAAAQRAGVSFVVATGRPARWIHPIIDQLYTPPTLCVCANGAVIYDPACDSIT
HRRELAPDAMRTVVRVAREALSDLGGCGVGVERAGVSAHDMPGELFMVTPDFVHSWESIEHSTVELDRVLARSAVKLLLR
NDALTSEQMHRLVAPVVPADVAHVTYSMPDGLLEVMQPGVNKSSALDVVAQDLGVDPADAIAFGDMLNDLEMIRWAGTGV
AMGNACDQLQRAADVVAPTNDEAGIAVVLREWLQG

Sequences:

>Translated_275_residues
MSALIVSDIDGTLIDSRERIPSAVKESLAAAQRAGVSFVVATGRPARWIHPIIDQLYTPPTLCVCANGAVIYDPACDSIT
HRRELAPDAMRTVVRVAREALSDLGGCGVGVERAGVSAHDMPGELFMVTPDFVHSWESIEHSTVELDRVLARSAVKLLLR
NDALTSEQMHRLVAPVVPADVAHVTYSMPDGLLEVMQPGVNKSSALDVVAQDLGVDPADAIAFGDMLNDLEMIRWAGTGV
AMGNACDQLQRAADVVAPTNDEAGIAVVLREWLQG
>Mature_274_residues
SALIVSDIDGTLIDSRERIPSAVKESLAAAQRAGVSFVVATGRPARWIHPIIDQLYTPPTLCVCANGAVIYDPACDSITH
RRELAPDAMRTVVRVAREALSDLGGCGVGVERAGVSAHDMPGELFMVTPDFVHSWESIEHSTVELDRVLARSAVKLLLRN
DALTSEQMHRLVAPVVPADVAHVTYSMPDGLLEVMQPGVNKSSALDVVAQDLGVDPADAIAFGDMLNDLEMIRWAGTGVA
MGNACDQLQRAADVVAPTNDEAGIAVVLREWLQG

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=272, Percent_Identity=28.6764705882353, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI87081741, Length=252, Percent_Identity=26.984126984127, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081790, Length=281, Percent_Identity=24.1992882562278, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787043, Length=270, Percent_Identity=24.0740740740741, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29354; Mature: 29223

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALIVSDIDGTLIDSRERIPSAVKESLAAAQRAGVSFVVATGRPARWIHPIIDQLYTPP
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
TLCVCANGAVIYDPACDSITHRRELAPDAMRTVVRVAREALSDLGGCGVGVERAGVSAHD
CEEEECCCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
MPGELFMVTPDFVHSWESIEHSTVELDRVLARSAVKLLLRNDALTSEQMHRLVAPVVPAD
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
VAHVTYSMPDGLLEVMQPGVNKSSALDVVAQDLGVDPADAIAFGDMLNDLEMIRWAGTGV
HHHEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
AMGNACDQLQRAADVVAPTNDEAGIAVVLREWLQG
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SALIVSDIDGTLIDSRERIPSAVKESLAAAQRAGVSFVVATGRPARWIHPIIDQLYTPP
CCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCC
TLCVCANGAVIYDPACDSITHRRELAPDAMRTVVRVAREALSDLGGCGVGVERAGVSAHD
CEEEECCCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
MPGELFMVTPDFVHSWESIEHSTVELDRVLARSAVKLLLRNDALTSEQMHRLVAPVVPAD
CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
VAHVTYSMPDGLLEVMQPGVNKSSALDVVAQDLGVDPADAIAFGDMLNDLEMIRWAGTGV
HHHEEECCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
AMGNACDQLQRAADVVAPTNDEAGIAVVLREWLQG
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]