| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is plsC [H]
Identifier: 38234774
GI number: 38234774
Start: 2327266
End: 2329098
Strand: Reverse
Name: plsC [H]
Synonym: DIP2238
Alternate gene names: 38234774
Gene position: 2329098-2327266 (Counterclockwise)
Preceding gene: 38234775
Following gene: 38234773
Centisome position: 93.59
GC content: 58.65
Gene sequence:
>1833_bases ATGGCAGGCATGTTCCAAGATCTTTTGTACCTCAACCTAATTGGTGCTGTGCGCGCGATCACGGCTGCCCAGGGCATCAA GATCCGTATTTCGGGCGAGGAGAATGTTCCAGAGTCTGGCGGCGCTGTTGTGGTGGTTAACCACACGGGGTACTTGGACT TTATTTATGCGGGATATCCGTTTAGGAAGTTCCGTAGGTATATCCGCTACATGGCTAAAGGGGATGTGTTTAAGCATCCG GTTGCGGGTCCGCTGTTGCGGGAGATGCGTCATATTCCTGTGGATCGCATCGACGGCACCGCGGCTTTTGACCAGGCGGT GGACATGCTCAAAAAGGGGGAATTGGTAGGCATTTTCCCCGAGGCGACGATTTCGCGCAGCTTTGAGATTAAAACGTTGC GCCCAGGGGCAGTGCGTATGGCGCAGGCTGCGGGGGTTCCGATCATCATGGTGATGGTGGTGGGGTCGCAGCGGGTGTGG ACGAAGGGACAAAAGAAGAACCTGATTCATCCTGGTTCGCCGATCCATATGAAGGTTTTCCCAGCGTGGTACCCCGAGGG TGATGCGAATGAGGCGACGCAGGAGTTGCGTCGTCGGATGATCACGGGCCTTGAGGAGGTGTGGTCTGATTATCAGGCGG AGGAGCCGATTGTTCCTGGTGCGTTGTGGGTGCCGGCGCGGTTGGGCGGCGGTGCGCCGACTTTCGACGAAGCCCAGGCG GAAGATGAGAAAGTGGAGCAGGAGCGTCGCCGTGTGCGCGTGCTCACGGAGGAGATCGCGCAGCTGACGGAGCGGATTAA GCAGGCCACGAAGGCGGGCGCGAGTGCTGTCGACGCTGCTCGACACCGTGTGGAAGACGTGTTGCATGGGGAGGTGCCCG CGAAGGCGGATGCGGGTAAGGCGTTGTCGGTGTTGAAGGACACTGTCGACGAGTTCGTTGAGGAGGTTGTCTCTAGCGCG AAGGAAGGTAAAGACCGTGTGATGGATGCCGGTGAGCAGCTGCGTCGTAGTGTTGCTGATCTGTATGGGCAGGCGGTGAC TGCTAGTCAGGTTAATCCTGTGGTGGTGCAGGCGACGGCCCAGGTCAGCATGTTGTTGGATCGGTTGCCGCAGCGTAAGG ACGCACCAAAGGTTGAGTTGCCACGCGTGTTGGTGCTCAGCGTCGATGGTGCGGTGGCTGCGTATCCTGAGGTCACGCTG TCGCCGTCGGTGTTGTCTCAGGTGGCGGCGTTATCTCAGCAGCACACGGTGGTGCTGACCACGATCAGTGGAATGGATCG GGTGGTGGCGCTTGCACGTCAGGTGGCACAGGAGTCGGGTGCGGATGTCTGTGTCAGTGCTAGCGCTGGTGCGGTGGCCG CCACGGTGAGTGATACGGATGTCTCTGTGTTGCATGAGTGTGTGGTTTCCGATGAGCTTCGCGCTGCCGTGCAAGAGTGT GTGGATAGCTTGGGCCTTGATGTGGAATGGAAAGGCGCTCACCATGGTGTTGTTTCTGGATTGGGGGCTGATCCAGACCT GTGGCAGGAATTATCGCAGGTAGTGCGGGTTGTTCCATTGCCTGGGGAGCCGGATCGTTGTGTGATTGTTTCGCCTGAGG CTTCTGTTGAGGCGGCTGTGCAGACGTGTGTGGGGGATGTCTGGGATGAGGTGTTGGTGTGTGCTGCTGATGCGTCGGAG GCAGGCGCGTTGGCGCGTGCGGGGCATCGTGTTGCGGTGGTCTCGGCACCGGTGGTGGTGTTGCGGGAGGCTGCGCAGTG GTGCGATCGTCCGGACAAAGACGGAGTAATTAATTTCTTAGACAAGCACTTTATTACCCCTGAAAGTGTGTAA
Upstream 100 bases:
>100_bases TCAGTTGCAGCGTGCCGCTGATGTGGTGGCTCCGACGAACGATGAGGCAGGCATTGCGGTGGTATTGCGGGAGTGGCTGC AGGGGTAGCAACCCCGTAAC
Downstream 100 bases:
>100_bases ATCGCGGGGGTTGGCGGGCTGTGTGGCGTATGTCGCGCAGCCCGTTTTTTGCCGCCACCACCACTGGTTATATCACCTGC TACCAGTTGTTATCATCTCC
Product: putative acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; 1-acyl-G3P acyltransferase; Lysophosphatidic acid acyltransferase; LPAAT; Phosphatidic acid synthase; PA synthase [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MAGMFQDLLYLNLIGAVRAITAAQGIKIRISGEENVPESGGAVVVVNHTGYLDFIYAGYPFRKFRRYIRYMAKGDVFKHP VAGPLLREMRHIPVDRIDGTAAFDQAVDMLKKGELVGIFPEATISRSFEIKTLRPGAVRMAQAAGVPIIMVMVVGSQRVW TKGQKKNLIHPGSPIHMKVFPAWYPEGDANEATQELRRRMITGLEEVWSDYQAEEPIVPGALWVPARLGGGAPTFDEAQA EDEKVEQERRRVRVLTEEIAQLTERIKQATKAGASAVDAARHRVEDVLHGEVPAKADAGKALSVLKDTVDEFVEEVVSSA KEGKDRVMDAGEQLRRSVADLYGQAVTASQVNPVVVQATAQVSMLLDRLPQRKDAPKVELPRVLVLSVDGAVAAYPEVTL SPSVLSQVAALSQQHTVVLTTISGMDRVVALARQVAQESGADVCVSASAGAVAATVSDTDVSVLHECVVSDELRAAVQEC VDSLGLDVEWKGAHHGVVSGLGADPDLWQELSQVVRVVPLPGEPDRCVIVSPEASVEAAVQTCVGDVWDEVLVCAADASE AGALARAGHRVAVVSAPVVVLREAAQWCDRPDKDGVINFLDKHFITPESV
Sequences:
>Translated_610_residues MAGMFQDLLYLNLIGAVRAITAAQGIKIRISGEENVPESGGAVVVVNHTGYLDFIYAGYPFRKFRRYIRYMAKGDVFKHP VAGPLLREMRHIPVDRIDGTAAFDQAVDMLKKGELVGIFPEATISRSFEIKTLRPGAVRMAQAAGVPIIMVMVVGSQRVW TKGQKKNLIHPGSPIHMKVFPAWYPEGDANEATQELRRRMITGLEEVWSDYQAEEPIVPGALWVPARLGGGAPTFDEAQA EDEKVEQERRRVRVLTEEIAQLTERIKQATKAGASAVDAARHRVEDVLHGEVPAKADAGKALSVLKDTVDEFVEEVVSSA KEGKDRVMDAGEQLRRSVADLYGQAVTASQVNPVVVQATAQVSMLLDRLPQRKDAPKVELPRVLVLSVDGAVAAYPEVTL SPSVLSQVAALSQQHTVVLTTISGMDRVVALARQVAQESGADVCVSASAGAVAATVSDTDVSVLHECVVSDELRAAVQEC VDSLGLDVEWKGAHHGVVSGLGADPDLWQELSQVVRVVPLPGEPDRCVIVSPEASVEAAVQTCVGDVWDEVLVCAADASE AGALARAGHRVAVVSAPVVVLREAAQWCDRPDKDGVINFLDKHFITPESV >Mature_609_residues AGMFQDLLYLNLIGAVRAITAAQGIKIRISGEENVPESGGAVVVVNHTGYLDFIYAGYPFRKFRRYIRYMAKGDVFKHPV AGPLLREMRHIPVDRIDGTAAFDQAVDMLKKGELVGIFPEATISRSFEIKTLRPGAVRMAQAAGVPIIMVMVVGSQRVWT KGQKKNLIHPGSPIHMKVFPAWYPEGDANEATQELRRRMITGLEEVWSDYQAEEPIVPGALWVPARLGGGAPTFDEAQAE DEKVEQERRRVRVLTEEIAQLTERIKQATKAGASAVDAARHRVEDVLHGEVPAKADAGKALSVLKDTVDEFVEEVVSSAK EGKDRVMDAGEQLRRSVADLYGQAVTASQVNPVVVQATAQVSMLLDRLPQRKDAPKVELPRVLVLSVDGAVAAYPEVTLS PSVLSQVAALSQQHTVVLTTISGMDRVVALARQVAQESGADVCVSASAGAVAATVSDTDVSVLHECVVSDELRAAVQECV DSLGLDVEWKGAHHGVVSGLGADPDLWQELSQVVRVVPLPGEPDRCVIVSPEASVEAAVQTCVGDVWDEVLVCAADASEA GALARAGHRVAVVSAPVVVLREAAQWCDRPDKDGVINFLDKHFITPESV
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid (PA) by incorporating an acyl moiety at the 2 position. This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm. Note=Probably associated with the membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 65700; Mature: 65569
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMFQDLLYLNLIGAVRAITAAQGIKIRISGEENVPESGGAVVVVNHTGYLDFIYAGYP CCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCC FRKFRRYIRYMAKGDVFKHPVAGPLLREMRHIPVDRIDGTAAFDQAVDMLKKGELVGIFP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECC EATISRSFEIKTLRPGAVRMAQAAGVPIIMVMVVGSQRVWTKGQKKNLIHPGSPIHMKVF CHHCCCCEEEEEECCCHHHHHHHCCCCEEEEEEECCCHHCCCCCCCCCCCCCCCEEEEEE PAWYPEGDANEATQELRRRMITGLEEVWSDYQAEEPIVPGALWVPARLGGGAPTFDEAQA ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHH EDEKVEQERRRVRVLTEEIAQLTERIKQATKAGASAVDAARHRVEDVLHGEVPAKADAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHH ALSVLKDTVDEFVEEVVSSAKEGKDRVMDAGEQLRRSVADLYGQAVTASQVNPVVVQATA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEHHH QVSMLLDRLPQRKDAPKVELPRVLVLSVDGAVAAYPEVTLSPSVLSQVAALSQQHTVVLT HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHCCCCEEEEE TISGMDRVVALARQVAQESGADVCVSASAGAVAATVSDTDVSVLHECVVSDELRAAVQEC EECCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDSLGLDVEWKGAHHGVVSGLGADPDLWQELSQVVRVVPLPGEPDRCVIVSPEASVEAAV HHHHCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHEEECCCCCCCEEEEECCCHHHHHHH QTCVGDVWDEVLVCAADASEAGALARAGHRVAVVSAPVVVLREAAQWCDRPDKDGVINFL HHHHHHHHHHHHEEECCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHH DKHFITPESV HHHCCCCCCC >Mature Secondary Structure AGMFQDLLYLNLIGAVRAITAAQGIKIRISGEENVPESGGAVVVVNHTGYLDFIYAGYP CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCC FRKFRRYIRYMAKGDVFKHPVAGPLLREMRHIPVDRIDGTAAFDQAVDMLKKGELVGIFP HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECC EATISRSFEIKTLRPGAVRMAQAAGVPIIMVMVVGSQRVWTKGQKKNLIHPGSPIHMKVF CHHCCCCEEEEEECCCHHHHHHHCCCCEEEEEEECCCHHCCCCCCCCCCCCCCCEEEEEE PAWYPEGDANEATQELRRRMITGLEEVWSDYQAEEPIVPGALWVPARLGGGAPTFDEAQA ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHH EDEKVEQERRRVRVLTEEIAQLTERIKQATKAGASAVDAARHRVEDVLHGEVPAKADAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHH ALSVLKDTVDEFVEEVVSSAKEGKDRVMDAGEQLRRSVADLYGQAVTASQVNPVVVQATA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEHHH QVSMLLDRLPQRKDAPKVELPRVLVLSVDGAVAAYPEVTLSPSVLSQVAALSQQHTVVLT HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCHHHHHHHHHHCCCCEEEEE TISGMDRVVALARQVAQESGADVCVSASAGAVAATVSDTDVSVLHECVVSDELRAAVQEC EECCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDSLGLDVEWKGAHHGVVSGLGADPDLWQELSQVVRVVPLPGEPDRCVIVSPEASVEAAV HHHHCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHEEECCCCCCCEEEEECCCHHHHHHH QTCVGDVWDEVLVCAADASEAGALARAGHRVAVVSAPVVVLREAAQWCDRPDKDGVINFL HHHHHHHHHHHHEEECCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHH DKHFITPESV HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]