| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is ppsA [H]
Identifier: 38234730
GI number: 38234730
Start: 2267907
End: 2272667
Strand: Reverse
Name: ppsA [H]
Synonym: DIP2189
Alternate gene names: 38234730
Gene position: 2272667-2267907 (Counterclockwise)
Preceding gene: 38234731
Following gene: 38234729
Centisome position: 91.32
GC content: 59.08
Gene sequence:
>4761_bases ATGGATTCTCGCGTCACGGCTATGACCACTTCGCAGCTACGCACATGGCTGCGAGATTGGGTCCTAGCCACTACAGGTTT GCCCGCGGAAGAAATCACCGATGATAAACCGATGCAATCTTTTGGGCTTTCCTCCCGTGACGTGGTGCTACTTTCAGGGG AATTAGAAAACCTCTTGGGCGTCAAACTCGACGCGACCATCGCTTATGAGTACCCGACGATCGCGGCGCTGAGCCAGCGT CTGATCGAGGGTGCTCCTGAGGCTGCCACCCCTGTCTTTACACAGCGGGAAACTCAGCGCACCGCGTCCCATGATATCGC TATCGTGGGTATGGCTGCCCGTTACCCTGGCGCACATGACATCGACCAAATGTGGTCGATGCTCATTGAGGGCCGCGACG GTATCACCGACCTGCCGGAGGGCCGTTGGTCGGAATATGCTGCTGACGAGGTCACCAGCGAAAAAATAGCTAATACCGAT TTACGGGGCGGCTACTTAGACGACATTGCTTTCTTTGATGCAGAGTTCTTTGGACTATCTCCGCTGGAAGCAGTCAATAT CGATCCGCAGCAGCGCATCATGTTGGAGCTGACATGGGAGGCTCTTGAGCACGCGCACATTCCGGCATCCTCGCTTAAGG GCAAGCCGGTGGGTGTGTTCTTCGGTTCTTCCAATAACGACTACGGTATGTTGATCGGTGCTGATCCAGCCGAGTCGCAC CCCTATGCGATGACGGGTAATGCCAGCTCGATTGTGGCTAACCGTGTGTCCTATGCCTTCGACTTCCGTGGCCCGTCGGT AAGCGTGGATACGGCGTGCTCCTCGTCGCTGGTATCGGTCCACCAAGCGGTGCGTGCACTGCGTGAGGGCGACGCTGATG TTGCTGTCTCCGGTGGCGTGAACATCATGGCGGCACCATTCGTGTCTACCAGCTTTGGCGAGCTTGGCGTGTTTAGCCCA ACGGGCAAGATCCACGCGTTTTCCGACGACGCCGATGGCTTCGTGCGTTCCGACGGCGCCGGTGTGCTCGTGCTCAAGCG CGTTGAGGACGCGGTCGCCGATGGCGATACCATCCTTGCTGTGATCAAGGGCTCCGCGGTGAACTCCGACGGACACTCCA ACGGTCTGACCGCCCCTAATCCAGACGCACAGGTCGATGTGCTGCAGCGCGCTTACGCCGACGCTGGTATTGACCCACGC TACGTGGACTACGTGGAAGCGCATGGAACGGGCACCATCTTGGGCGACCCCATTGAGGCAACCGCACTCGGTAAGGTCCT AGGCCCTGGCCGTGACGCAGCAACCCCTACTTTGCTGGGTTCTGCTAAGACCAACTTTGGTCACTCCGAATCGGCTGCTG GCGCTGCGGGCCTGATCAAGGTGGTGTTGTCGATGATGAACAACACGCTGCCAGCGTCCCTGAATTTCGCTGGTCCGAAC CGCTACGTCGATTTTGATGCCGAGCACCTCGAGGTCGTGGAAGATCCACGCGAATGGCCTGAGTATTCCGGCAAGAAGAT CGCCGGTGTGTCCGGATTTGGTTTTGGCGGCACCAATGCGCACGTTGTGCTGAGCTCGTATGAGCCGGCGGCTGATGTGG AACGTCGTCACGCTCCGAGCCTGATCGACCCGGACAACCCGAATGCTGTCACCCTTGAGGTGTCGGGATTGCTGCCGTCG CGACGTCGTGAAGCAGCCGCCGCGCTGGCCGACTTCCTCGAGGGTCGCCCCGACAGCGACCTGCCCAAGGTGGCGCGCTC GACCGCAAAGCGCAACCATGGCCGCTCCCGCGCTGTGGTCACAGCAGAAACCACCGAAGAGGCCGTCAAACGCCTGCGTA CCGTCGCTGAGGGCAAGACCGCCATGGGTATCGCAGTGGCCGACGCCCCCAGCAACGCACCCGTGTTTGTTTACTCCGGT TTCGGCTCCCAGCACCGCCTGATGGCCAAGAAGCTGCTGGGCGTTTCCGAGGAGTTCGCGCAGCGTATCGCGGAGCTCGA CGAGCTGGTGGTTTTTGAGGCCGGCTGGTCCATGCTGGACATCATCACCAACGATGAGGAAACCTACACCACCGAAACCG CGCAGGTCACCATCACTGCCATCCAGATTGCACTGACAGATCTGCTGGCTTCCTTTGGTGCCACCCCAGCGGGTGTTGTG GGCATGTCGATGGGTGAGATCGCTGCGGCCTACGCCGCCGGCGGCTTGTCTGATCGCGATGCGATGACCATTGCTATCCA CCGTGCTCGTTTGATGGGCGAGGGCGAGAGGTCACTACCTGAGGACCAGCTCGGCGCTATGGCCGTGGTGGAATTCTCCG TGGAGGCGCTGGAGGAGTTCCGTCAACAAAACCCAGAGTTCAGCGGTGTGGAGCCAGCCGTGTATGCAGCCCCTGGCATG ACCACTGTGGGTGGCCCACGTGAGGCCGTGATCAAGTTGGTGGAAAAACTTGAGTCAGAGGGCAAGTTTGCGCGTTTGCT CAATGTGAAGGGCGCAGGCCACACAAGTGCTTTGGATCCGCTGTTGGGTGAGCTCGCAGCTGAAACCTCGATGATTGAGC CGAAACCACTGCGCATTCCGCTGTATAGCTCGGTGGATCGCGCGACTGTATATCCTGTCGGTTCGGTGGTGCACACCACC GATTACTGGTTGCGTTGTACGCGTCAGTCGGTGTGGTTCCAAGACGCAACAGAGCAGGCGTTTGCGCATGGAGCCATGAT GCTGGTGGAGATTTCTCCGAATCCTGTTGCGCTGATGCCAATGATGAACACCGCTTTTAGTGTTGGTAAGTCGGATGCGC AGTTGTTGTTTGCGTTGAAGCGCAAGGTGGACGAGGTGGCGTCGATACGCGACCTGTTGGCCAAGATTTATGTTACGGGC GCGCCGATTTCCTTCGAGTATGGCGATGGGGAGATTATTCCTGCGCCGCATATTCCATGGAAGCGCCAGCATTATTGGAC GTCCGCGCGGCCGTCGTCAAGCAATCGTGTTGCGATGCCGGGCACGAAGGTTACGCTGCCAGGTGGCGCGCAGGCGTTTA CGATGGTCGCCGATCAGGTGCCGTCCACCGCAGCGCTTATCGACGCTACCGTCACCTCCGTACAACCAGGCGCGCAGGTG CTCGCGATTTCTGAAACCGCAACGCTGCCCGCAACCGGTGAGCTGACCACTGTTGCTACCCCGAATGTTGGCGGTGTGGC AGTGGTGGTTTACCGCGTGATTGACGGCCAAACCCAGCAGATCGCCGAGGCATTTGCCACCACGCTTAGTGCCCCGCATC CCCCAGCCGCTGAGGTTGCTCCTGATTCGGTGGTAGGCACAGTAGTTGAGGTAGAAGCCCCGGAGGTGCCCGATAACCTG TTGTGGGATCCCGCCACGGAGACTGTGGAGGAGCGCCTGCGCGCTATCGTTTCTGAGGCCATGGGCTATGACGTTGCGGA TCTTCCCCGCGAGCTGCCACTGATCGATCTGGGCTTGGACTCCCTGATGGGCATGCGCATTAAGAACCGTGTGGAGCATG ACTTCCAGATTCCGCCGCTGCAGGTACAAACCCTGCGCGATGCTTCTGTTGCAGACGTGGTTGCCCTTCTGGAGGAACTC GTTGCCGACCGTGGCGCAGCCCAGCCCGCCGAAACTGAAATCGCTATCGAGCACACTGCTACCGCCGCGGAATCCCATGA GGTAGGCGTGGCGCCACGTGATGCTTCCGAGCGTTTGGTCTTTGCTACATGGGCCGGTATTACAGGGGCTGCGGCAGCCG GGGTGACCAGCACTTTGCCGAAGATCACTGAGGAGCAGGCTCGAGAAATCGCAGAGCGCCTCACAGAGCGTGCTGGTGTT GCGATGTCTGCGGAGCAGGTGCAGCAGGCGGAAACGCTTGAACCTTTGGCCAACATTGTGCGCGAGGGATTAGAAACCGA TGTGGAGGGCAACATCCGTGTGCTGCGTGCCCGCCCTGAGGGCTCCACGCAACCAGCTGTGTTCATGTTCCACCCAGCCG GCGGTAGTTCCGTGGTGTACCAGCCGCTGATGCGTCGGTTGCCTGCGGACGTTCCTGTCTACGGTGTGGAGCGTCGCGAA GGCTCGTTAGAGGAACGCGCCGCAGCTTACCTTGATGAGATCAAGCAGTACTCTGATGGCCTGCCCATCATTTTGGGCGG TTGGAGCTTCGGTGGCGCGTTGGCTTATGAAGTGGCTTACCAGCTGCAGGATTCCGACGTGGAGATCGCAACGATTGCTT TGCTGGACACCGTGCAGCCTGCGCATTTGGCGCCGGATACTAAGGAAGAAACGGTTAAGCGTTGGGAGCGCTACTCGGCG TTTGCTAAGAAGACCTATGGTCTTGATTTCCCAGTGCCCTATGAGCTGCTGGAAACCGCTGGTGAAGATGCGCTATTGGC GATGATGGCGGAGTTCTTGTCCACCACTGATGCTACAGAGCACGGTTTGTCGGCGGGTGTGCTGGAGCACCAGCGTGCTT CCTTTGTAGACAACCGCATTTTGGATCGTATGGACATGCAGCGCTGGGCAAATGTGAAGATTCCGGTGATGTTGTTCCGT GCTGAGCGTATGCATGATGGGGCTATTGAGCTGGAACCCGCGTACGCTGAGATTGAGCCTGATGGCGGATGGTCGGCTAT CGTTGAAGATTTGGTGATCATCCAACTATCTGGCGACCACCTAGCAGTGGTGGATGAGCCGGAGATCGGTAAGGTTGGTG TGGCGCTCACCAACAGGATTGAACAGCTACAGGGTAAGTAG
Upstream 100 bases:
>100_bases AGATTTTTTGGGATATTGCCCCGCGCGTGAAACATTTGTGACGCGTGAGACGATATAGAATGGAACGACTGTCTCGTCTG CAATATTCTGAGGTTAAAGT
Downstream 100 bases:
>100_bases GAGATTGGACTGTGAGTACGACTGCGGAAAAGCTCGCTGACCTTCGGGCGCGCCTAGAAAAGGCGCAGGATCCAGGTAGT GAGCGGGCGCGGGCTAAGCG
Product: putative polyketide synthase
Products: [acyl carrier protein]; acetoacetyl-ACP; CO2; [acyl carrier protein]; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 1586; Mature: 1586
Protein sequence:
>1586_residues MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLGVKLDATIAYEYPTIAALSQR LIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHDIDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSEKIANTD LRGGYLDDIAFFDAEFFGLSPLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGVNIMAAPFVSTSFGELGVFSP TGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILAVIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPR YVDYVEAHGTGTILGDPIEATALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADVERRHAPSLIDPDNPNAVTLEVSGLLPS RRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVVTAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSG FGSQHRLMAKKLLGVSEEFAQRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGERSLPEDQLGAMAVVEFSVEALEEFRQQNPEFSGVEPAVYAAPGM TTVGGPREAVIKLVEKLESEGKFARLLNVKGAGHTSALDPLLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTT DYWLRCTRQSVWFQDATEQAFAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG APISFEYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGAQAFTMVADQVPSTAALIDATVTSVQPGAQV LAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQIAEAFATTLSAPHPPAAEVAPDSVVGTVVEVEAPEVPDNL LWDPATETVEERLRAIVSEAMGYDVADLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL VADRGAAQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLPKITEEQAREIAERLTERAGV AMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPEGSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERRE GSLEERAAAYLDEIKQYSDGLPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRILDRMDMQRWANVKIPVMLFR AERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDHLAVVDEPEIGKVGVALTNRIEQLQGK
Sequences:
>Translated_1586_residues MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLGVKLDATIAYEYPTIAALSQR LIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHDIDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSEKIANTD LRGGYLDDIAFFDAEFFGLSPLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGVNIMAAPFVSTSFGELGVFSP TGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILAVIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPR YVDYVEAHGTGTILGDPIEATALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADVERRHAPSLIDPDNPNAVTLEVSGLLPS RRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVVTAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSG FGSQHRLMAKKLLGVSEEFAQRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGERSLPEDQLGAMAVVEFSVEALEEFRQQNPEFSGVEPAVYAAPGM TTVGGPREAVIKLVEKLESEGKFARLLNVKGAGHTSALDPLLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTT DYWLRCTRQSVWFQDATEQAFAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG APISFEYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGAQAFTMVADQVPSTAALIDATVTSVQPGAQV LAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQIAEAFATTLSAPHPPAAEVAPDSVVGTVVEVEAPEVPDNL LWDPATETVEERLRAIVSEAMGYDVADLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL VADRGAAQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLPKITEEQAREIAERLTERAGV AMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPEGSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERRE GSLEERAAAYLDEIKQYSDGLPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRILDRMDMQRWANVKIPVMLFR AERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDHLAVVDEPEIGKVGVALTNRIEQLQGK >Mature_1586_residues MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLGVKLDATIAYEYPTIAALSQR LIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHDIDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSEKIANTD LRGGYLDDIAFFDAEFFGLSPLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGVNIMAAPFVSTSFGELGVFSP TGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILAVIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPR YVDYVEAHGTGTILGDPIEATALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADVERRHAPSLIDPDNPNAVTLEVSGLLPS RRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVVTAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSG FGSQHRLMAKKLLGVSEEFAQRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGERSLPEDQLGAMAVVEFSVEALEEFRQQNPEFSGVEPAVYAAPGM TTVGGPREAVIKLVEKLESEGKFARLLNVKGAGHTSALDPLLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTT DYWLRCTRQSVWFQDATEQAFAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG APISFEYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGAQAFTMVADQVPSTAALIDATVTSVQPGAQV LAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQIAEAFATTLSAPHPPAAEVAPDSVVGTVVEVEAPEVPDNL LWDPATETVEERLRAIVSEAMGYDVADLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL VADRGAAQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLPKITEEQAREIAERLTERAGV AMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPEGSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERRE GSLEERAAAYLDEIKQYSDGLPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRILDRMDMQRWANVKIPVMLFR AERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDHLAVVDEPEIGKVGVALTNRIEQLQGK
Specific function: Polyketide synthase involved in phenolpthiocerol synthesis [H]
COG id: COG3321
COG function: function code Q; Polyketide synthase modules and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 acyl carrier domains [H]
Homologues:
Organism=Homo sapiens, GI41872631, Length=909, Percent_Identity=31.2431243124312, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI8923559, Length=284, Percent_Identity=32.0422535211268, Blast_Score=120, Evalue=1e-26, Organism=Escherichia coli, GI1787337, Length=302, Percent_Identity=32.1192052980132, Blast_Score=137, Evalue=4e-33, Organism=Escherichia coli, GI1788663, Length=292, Percent_Identity=29.1095890410959, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI212642053, Length=770, Percent_Identity=32.3376623376623, Blast_Score=358, Evalue=2e-98, Organism=Caenorhabditis elegans, GI17550940, Length=672, Percent_Identity=27.2321428571429, Blast_Score=208, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71983541, Length=294, Percent_Identity=30.2721088435374, Blast_Score=127, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71983535, Length=273, Percent_Identity=31.1355311355311, Blast_Score=121, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6320904, Length=452, Percent_Identity=26.1061946902655, Blast_Score=133, Evalue=2e-31, Organism=Drosophila melanogaster, GI221330659, Length=922, Percent_Identity=31.4533622559653, Blast_Score=346, Evalue=1e-94, Organism=Drosophila melanogaster, GI19920632, Length=922, Percent_Identity=31.4533622559653, Blast_Score=345, Evalue=1e-94, Organism=Drosophila melanogaster, GI24581345, Length=830, Percent_Identity=30.7228915662651, Blast_Score=312, Evalue=1e-84, Organism=Drosophila melanogaster, GI24644341, Length=287, Percent_Identity=35.5400696864112, Blast_Score=144, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001227 - InterPro: IPR009081 - InterPro: IPR014043 - InterPro: IPR016035 - InterPro: IPR000794 - InterPro: IPR002198 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016036 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020801 - InterPro: IPR020841 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00698 Acyl_transf_1; PF00106 adh_short; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF00550 PP-binding [H]
EC number: 2.3.1.41 [C]
Molecular weight: Translated: 169696; Mature: 169696
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50075 ACP_DOMAIN ; PS00606 B_KETOACYL_SYNTHASE ; PS00201 FLAVODOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLG CCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHCCCCCCEEEEECCHHHHHC VKLDATIAYEYPTIAALSQRLIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHD EEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCC IDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSEKIANTDLRGGYLDDIAFFDAEFFGLS HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC PLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH CCCCCCCCHHHHEEEEEEHHHHHHCCCCHHHCCCCEEEEEECCCCCCEEEEEECCCCCCC PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGV CEEEECCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC NIMAAPFVSTSFGELGVFSPTGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILA EEEEECCCCCCCCCCEEECCCCCEEEECCCCCCCEECCCCCEEEEEEHHHHHCCCCEEEE VIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPRYVDYVEAHGTGTILGDPIEA EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEEECCCCCEECCCCCH TALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN HHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADVERRHAPS CEECCCHHHHHHHHCCHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCC LIDPDNPNAVTLEVSGLLPSRRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVV CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEE TAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSGFGSQHRLMAKKLLGVSEEFA EECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHH QRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV HHHHHHHHEEEEECCCCEEEEEECCCCCEEECCEEEEEHHHHHHHHHHHHHHCCCCCHHH GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGERSLPEDQLGAMAVVEFSVEALEEF HCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHH RQQNPEFSGVEPAVYAAPGMTTVGGPREAVIKLVEKLESEGKFARLLNVKGAGHTSALDP HHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH LLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTTDYWLRCTRQSVWFQDATEQA HHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHH FAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG HHCCCEEEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC APISFEYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGAQAFTMVADQV CCEEEECCCCCEECCCCCCCCCCCEECCCCCCCCCEEECCCCEEECCCCCHHHHHHHHCC PSTAALIDATVTSVQPGAQVLAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQ CCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEHHHCCCHHH IAEAFATTLSAPHPPAAEVAPDSVVGTVVEVEAPEVPDNLLWDPATETVEERLRAIVSEA HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH MGYDVADLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL HCCCHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHH VADRGAAQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLP HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCHHHHHH KITEEQAREIAERLTERAGVAMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPE HHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC GSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERREGSLEERAAAYLDEIKQYSDG CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC LPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA CCEEEECCCCCCHHEEHHHHEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRI HHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH LDRMDMQRWANVKIPVMLFRAERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDH HHHHHHHHHCCCCEEEEEEEHHHCCCCCEEECCCEEEECCCCCHHHHHCCEEEEEECCCE LAVVDEPEIGKVGVALTNRIEQLQGK EEEECCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MDSRVTAMTTSQLRTWLRDWVLATTGLPAEEITDDKPMQSFGLSSRDVVLLSGELENLLG CCCCEEEHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHCCCCCCEEEEECCHHHHHC VKLDATIAYEYPTIAALSQRLIEGAPEAATPVFTQRETQRTASHDIAIVGMAARYPGAHD EEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCC IDQMWSMLIEGRDGITDLPEGRWSEYAADEVTSEKIANTDLRGGYLDDIAFFDAEFFGLS HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC PLEAVNIDPQQRIMLELTWEALEHAHIPASSLKGKPVGVFFGSSNNDYGMLIGADPAESH CCCCCCCCHHHHEEEEEEHHHHHHCCCCHHHCCCCEEEEEECCCCCCEEEEEECCCCCCC PYAMTGNASSIVANRVSYAFDFRGPSVSVDTACSSSLVSVHQAVRALREGDADVAVSGGV CEEEECCCHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC NIMAAPFVSTSFGELGVFSPTGKIHAFSDDADGFVRSDGAGVLVLKRVEDAVADGDTILA EEEEECCCCCCCCCCEEECCCCCEEEECCCCCCCEECCCCCEEEEEEHHHHHCCCCEEEE VIKGSAVNSDGHSNGLTAPNPDAQVDVLQRAYADAGIDPRYVDYVEAHGTGTILGDPIEA EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEEECCCCCEECCCCCH TALGKVLGPGRDAATPTLLGSAKTNFGHSESAAGAAGLIKVVLSMMNNTLPASLNFAGPN HHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCC RYVDFDAEHLEVVEDPREWPEYSGKKIAGVSGFGFGGTNAHVVLSSYEPAADVERRHAPS CEECCCHHHHHHHHCCHHCCCCCCCEEECCCCCCCCCCCCEEEEECCCCHHHHHHHCCCC LIDPDNPNAVTLEVSGLLPSRRREAAAALADFLEGRPDSDLPKVARSTAKRNHGRSRAVV CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEE TAETTEEAVKRLRTVAEGKTAMGIAVADAPSNAPVFVYSGFGSQHRLMAKKLLGVSEEFA EECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHH QRIAELDELVVFEAGWSMLDIITNDEETYTTETAQVTITAIQIALTDLLASFGATPAGVV HHHHHHHHEEEEECCCCEEEEEECCCCCEEECCEEEEEHHHHHHHHHHHHHHCCCCCHHH GMSMGEIAAAYAAGGLSDRDAMTIAIHRARLMGEGERSLPEDQLGAMAVVEFSVEALEEF HCCHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHH RQQNPEFSGVEPAVYAAPGMTTVGGPREAVIKLVEKLESEGKFARLLNVKGAGHTSALDP HHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH LLGELAAETSMIEPKPLRIPLYSSVDRATVYPVGSVVHTTDYWLRCTRQSVWFQDATEQA HHHHHHHHHCCCCCCCCEEECCCCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHH FAHGAMMLVEISPNPVALMPMMNTAFSVGKSDAQLLFALKRKVDEVASIRDLLAKIYVTG HHCCCEEEEEECCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC APISFEYGDGEIIPAPHIPWKRQHYWTSARPSSSNRVAMPGTKVTLPGGAQAFTMVADQV CCEEEECCCCCEECCCCCCCCCCCEECCCCCCCCCEEECCCCEEECCCCCHHHHHHHHCC PSTAALIDATVTSVQPGAQVLAISETATLPATGELTTVATPNVGGVAVVVYRVIDGQTQQ CCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEHHHCCCHHH IAEAFATTLSAPHPPAAEVAPDSVVGTVVEVEAPEVPDNLLWDPATETVEERLRAIVSEA HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH MGYDVADLPRELPLIDLGLDSLMGMRIKNRVEHDFQIPPLQVQTLRDASVADVVALLEEL HCCCHHHCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHH VADRGAAQPAETEIAIEHTATAAESHEVGVAPRDASERLVFATWAGITGAAAAGVTSTLP HHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCHHHHHH KITEEQAREIAERLTERAGVAMSAEQVQQAETLEPLANIVREGLETDVEGNIRVLRARPE HHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC GSTQPAVFMFHPAGGSSVVYQPLMRRLPADVPVYGVERREGSLEERAAAYLDEIKQYSDG CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC LPIILGGWSFGGALAYEVAYQLQDSDVEIATIALLDTVQPAHLAPDTKEETVKRWERYSA CCEEEECCCCCCHHEEHHHHEECCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH FAKKTYGLDFPVPYELLETAGEDALLAMMAEFLSTTDATEHGLSAGVLEHQRASFVDNRI HHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHH LDRMDMQRWANVKIPVMLFRAERMHDGAIELEPAYAEIEPDGGWSAIVEDLVIIQLSGDH HHHHHHHHHCCCCEEEEEEEHHHCCCCCEEECCCEEEECCCCCHHHHHCCEEEEEECCCE LAVVDEPEIGKVGVALTNRIEQLQGK EEEECCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: None [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.138 {cis-9-hexadecenoyl-ACP}} 0.017 {cis-9-hexadecenoyl-ACP}} 0.012 {cis-3-decenoyl-ACP}} 0.04 {acetyl-ACP}} 0.031 {acetyl-ACP}} [C]
Substrates: acetyl-ACP; malonyl-ACP; acyl-ACP [C]
Specific reaction: acetyl-ACP + malonyl-ACP = [acyl carrier protein] + acetoacetyl-ACP + CO2 acyl-ACP + malonyl-ACP = [acyl carrier protein] + beta-ketoacyl-ACP + CO2 [C]
General reaction: Acyl group transfer [C]
Inhibitor: Acetyl-CoA; Acyl-CoA; Iodoacetamide; N-Ethyl maleimide acyl -ACP-derivatives protect, malonyl-ACP-decarboxylation, Cerulenin [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]