| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38234432
Identifier: 38234432
GI number: 38234432
Start: 1905358
End: 1906065
Strand: Reverse
Name: 38234432
Synonym: DIP1862
Alternate gene names: NA
Gene position: 1906065-1905358 (Counterclockwise)
Preceding gene: 38234433
Following gene: 38234427
Centisome position: 76.59
GC content: 53.53
Gene sequence:
>708_bases ATGAGTAATTTACGTATTGCTTATGACCGTTTGCGGTCGATGTCGCGGACGGAAGAAAACCCTACTGTTCAGGCGATGCA GATTGCTCTTCATATTCCGAAGAATGATCCTCCTGCCCGTTCCGAGATTTTGCAGGCTGCAGCTCAAGCGGTTGTTGCTT GCTGTTTGAGTGAGGAATCAGTGACAGATGAGTGGTATGGCAACCGATTGCAGCAGTGGTATGACCATCGGATTCGGAAG GTGGCGCGCCGTGGTAGGAACGCTGCGTGGGAACGCGTGACGACGCTCCCCGGTGTTTCTTCGGTTTCTGGTTCCGCGGA GGCTCGTGCTTTTGTGCCGGGGCCTGTCGATTCAGTGGATCCGTTGTTGAAGAAACTGCAGATTTCTCATACCGATGTTC CTTTTGATTCGCCTGCCGATCCCACTGAGGGGCCGGTGTTGTATGTGGATCGTGGTTTGGGCATGTCTGTAGGCAAAACG GCAGCCCAAGTTGGGCATGGGTCGATGCTTCTTGCCGCAGCGCAACCTTTTGAGTGGGTTGAGCGTTGGGCAGACCAAGG CTACCGCCTGAGCGTGCGGGAAGTTGATTCTGAGGTGTTCCGTAAAGCAGCAGAGCAGCCAGGTGCTGTTCATGTGATTG ATGCGGGTTTTACAGAAGTTGCTCCTAGCTCATTGACGGTTGTGGCGTTACCTATGCTGCTTTTTTGA
Upstream 100 bases:
>100_bases GTTAATACTCCTTTCCTTGATGAGGTCCTTTATATGTTGGGCATCACGCGCGAAGAAATCGATGCTGATGGGGAGTCTCG TCGCGTTCCTTTGGAAGCAC
Downstream 100 bases:
>100_bases TTTTCTTTTCTCTGCGTTGCCTAAACGTTTGCCCCGCTAGCACCCCTTCCGGTGTGGTAACCACCCTACGATCACCGATC TGCCACGTCACCACACCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSNLRIAYDRLRSMSRTEENPTVQAMQIALHIPKNDPPARSEILQAAAQAVVACCLSEESVTDEWYGNRLQQWYDHRIRK VARRGRNAAWERVTTLPGVSSVSGSAEARAFVPGPVDSVDPLLKKLQISHTDVPFDSPADPTEGPVLYVDRGLGMSVGKT AAQVGHGSMLLAAAQPFEWVERWADQGYRLSVREVDSEVFRKAAEQPGAVHVIDAGFTEVAPSSLTVVALPMLLF
Sequences:
>Translated_235_residues MSNLRIAYDRLRSMSRTEENPTVQAMQIALHIPKNDPPARSEILQAAAQAVVACCLSEESVTDEWYGNRLQQWYDHRIRK VARRGRNAAWERVTTLPGVSSVSGSAEARAFVPGPVDSVDPLLKKLQISHTDVPFDSPADPTEGPVLYVDRGLGMSVGKT AAQVGHGSMLLAAAQPFEWVERWADQGYRLSVREVDSEVFRKAAEQPGAVHVIDAGFTEVAPSSLTVVALPMLLF >Mature_234_residues SNLRIAYDRLRSMSRTEENPTVQAMQIALHIPKNDPPARSEILQAAAQAVVACCLSEESVTDEWYGNRLQQWYDHRIRKV ARRGRNAAWERVTTLPGVSSVSGSAEARAFVPGPVDSVDPLLKKLQISHTDVPFDSPADPTEGPVLYVDRGLGMSVGKTA AQVGHGSMLLAAAQPFEWVERWADQGYRLSVREVDSEVFRKAAEQPGAVHVIDAGFTEVAPSSLTVVALPMLLF
Specific function: Unknown
COG id: COG1990
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25749; Mature: 25618
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLRIAYDRLRSMSRTEENPTVQAMQIALHIPKNDPPARSEILQAAAQAVVACCLSEES CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC VTDEWYGNRLQQWYDHRIRKVARRGRNAAWERVTTLPGVSSVSGSAEARAFVPGPVDSVD CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHH PLLKKLQISHTDVPFDSPADPTEGPVLYVDRGLGMSVGKTAAQVGHGSMLLAAAQPFEWV HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHH ERWADQGYRLSVREVDSEVFRKAAEQPGAVHVIDAGFTEVAPSSLTVVALPMLLF HHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCHHHHHHHHHHC >Mature Secondary Structure SNLRIAYDRLRSMSRTEENPTVQAMQIALHIPKNDPPARSEILQAAAQAVVACCLSEES CCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC VTDEWYGNRLQQWYDHRIRKVARRGRNAAWERVTTLPGVSSVSGSAEARAFVPGPVDSVD CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHH PLLKKLQISHTDVPFDSPADPTEGPVLYVDRGLGMSVGKTAAQVGHGSMLLAAAQPFEWV HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCHHHH ERWADQGYRLSVREVDSEVFRKAAEQPGAVHVIDAGFTEVAPSSLTVVALPMLLF HHHHCCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA