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The map label for this gene is xylB [H]

Identifier: 38234317

GI number: 38234317

Start: 1790536

End: 1791924

Strand: Direct

Name: xylB [H]

Synonym: DIP1746

Alternate gene names: 38234317

Gene position: 1790536-1791924 (Clockwise)

Preceding gene: 38234316

Following gene: 38234318

Centisome position: 71.95

GC content: 54.64

Gene sequence:

>1389_bases
ATGATTCTTGCCATTGACCTTGGAACTTCCGGAGCAAAAGCTGCCATCATCGATTCGGCTGGAGCTGTGCATGAACAAAC
ATTCGTGCCCTACTCCACCACCAAGCTTCCCAATGGCGGCGTGGAACAAGACCCCATGCAGTGGGTTTCAGCGGCACGTC
AAGCAGTCACTCGGTTGCCACGCAGCTACTCCGTAGTCAGTTTTACAGGTCAAATGCAAGATCTTATTTGTTTGGATCGC
GCAGGCAGACCCCTTGGTCAGGCGCTTCTTTACAACGACGCTCGCGCTGCCGCTGAAGCAGCACGACTGAACACAGTGGT
ACCTGAATGGAAAGACATTACGGGGAATCGACAAACTGCCACGTCGACGGCGGCAATGTGGTTGCGTCTGATGGAGCAAT
CGGATGTATCAGATGTTGCCTCGGTGTTGTTTTCACCGGCGTCCTTTGTGGTCAGTCAACTCGAGTGTGGTCTGGTGTGC
GACGAAACCACTGCGTCGAGTACTGGCCTTTTTGATATTCACCATCGCTGCTGGTCAGATGATATTGTTCAGGCCTGCGG
ATTGCGCATGGACATGCTGCCCACTATTGCGAGCGGGTTCTTAGATACCGTGGGCGCCGATAATTGCTTAGGGCTACCTG
CCGGCACCAAAGTAGTGCTCTCACTCGGCGATGCCGCCTCAACCACCTGCGGAATCGTGGGCTTAGGAGCAGGAGACGAC
TTCGTGTCACTTGGCACGTCTGGGTGGCATGCTCGGGTGGTATCTACGGTGTCCGATCCTTCAGAAGTCAGACAGTTTGC
GCTGCCTGACGGCGGAATTTTGCGTATAGCCTCAGTACTTAGTGTGGGTGGCACAGCCGACTGGGCGCGTTCAGTTCTCT
TGCCTGGAGTAAGCGCGAAGGAAGCCGACGCACTCATGTTGCAGCGCCCACGACTCGCCACTGGATTGTTATCGTTGCCA
TCAATCCAAGGCGAAAGCTTTCCCGTTCGCAGCCACAGCGTTGGCGGTTGTATCTTAGGTATGCGTGGTAACCAGGATCC
GCTTACTCTTTACACCGCTGTTATCGAGGGCATTTGTATGACCTTGGCTCATGACATCAAACCTGGTGGAATTTTGCCAG
CAACAGGCGGTGGTGCCCGATCGGTTCCGTGGATGCGTATCTTGGCCAGCGTGACCAACCGCAACATTCACGTCACTGTT
TCAGAGGATGCTGCGTTGCATGGTGCTGCTTCTCTTGCTGCGTATGCAACATCTGCCGAGTATCTTCCGACACTTGCGGC
TCGGGCGATCGTAGAGATCGAACCCGAGCCAGAAGTTGTCGCTTCATTTGAGCCGCTCATAGCGAAGCATCTAGAACTAT
TCCGGTTCGCAGCGGCACTGAGCTATTAG

Upstream 100 bases:

>100_bases
TCCTCCCCCACGGTGAACTATCCATGGGCATGTCGGGCGATTTCGAGTGGGCCATCGAAGAAGGTGCCACTTCTGTTCGA
GTAGGAAGCGCATTATTTTT

Downstream 100 bases:

>100_bases
CTTTTCACCACGGTAATTTGCCAGCCAGCAGTGGAAGTCTGCCACATCGTGGCCTTCGTCTGCAGCCCATCGCGGAATGG
TCTCAGTAGCTTGGGTGCAG

Product: putative xylulose kinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MILAIDLGTSGAKAAIIDSAGAVHEQTFVPYSTTKLPNGGVEQDPMQWVSAARQAVTRLPRSYSVVSFTGQMQDLICLDR
AGRPLGQALLYNDARAAAEAARLNTVVPEWKDITGNRQTATSTAAMWLRLMEQSDVSDVASVLFSPASFVVSQLECGLVC
DETTASSTGLFDIHHRCWSDDIVQACGLRMDMLPTIASGFLDTVGADNCLGLPAGTKVVLSLGDAASTTCGIVGLGAGDD
FVSLGTSGWHARVVSTVSDPSEVRQFALPDGGILRIASVLSVGGTADWARSVLLPGVSAKEADALMLQRPRLATGLLSLP
SIQGESFPVRSHSVGGCILGMRGNQDPLTLYTAVIEGICMTLAHDIKPGGILPATGGGARSVPWMRILASVTNRNIHVTV
SEDAALHGAASLAAYATSAEYLPTLAARAIVEIEPEPEVVASFEPLIAKHLELFRFAAALSY

Sequences:

>Translated_462_residues
MILAIDLGTSGAKAAIIDSAGAVHEQTFVPYSTTKLPNGGVEQDPMQWVSAARQAVTRLPRSYSVVSFTGQMQDLICLDR
AGRPLGQALLYNDARAAAEAARLNTVVPEWKDITGNRQTATSTAAMWLRLMEQSDVSDVASVLFSPASFVVSQLECGLVC
DETTASSTGLFDIHHRCWSDDIVQACGLRMDMLPTIASGFLDTVGADNCLGLPAGTKVVLSLGDAASTTCGIVGLGAGDD
FVSLGTSGWHARVVSTVSDPSEVRQFALPDGGILRIASVLSVGGTADWARSVLLPGVSAKEADALMLQRPRLATGLLSLP
SIQGESFPVRSHSVGGCILGMRGNQDPLTLYTAVIEGICMTLAHDIKPGGILPATGGGARSVPWMRILASVTNRNIHVTV
SEDAALHGAASLAAYATSAEYLPTLAARAIVEIEPEPEVVASFEPLIAKHLELFRFAAALSY
>Mature_462_residues
MILAIDLGTSGAKAAIIDSAGAVHEQTFVPYSTTKLPNGGVEQDPMQWVSAARQAVTRLPRSYSVVSFTGQMQDLICLDR
AGRPLGQALLYNDARAAAEAARLNTVVPEWKDITGNRQTATSTAAMWLRLMEQSDVSDVASVLFSPASFVVSQLECGLVC
DETTASSTGLFDIHHRCWSDDIVQACGLRMDMLPTIASGFLDTVGADNCLGLPAGTKVVLSLGDAASTTCGIVGLGAGDD
FVSLGTSGWHARVVSTVSDPSEVRQFALPDGGILRIASVLSVGGTADWARSVLLPGVSAKEADALMLQRPRLATGLLSLP
SIQGESFPVRSHSVGGCILGMRGNQDPLTLYTAVIEGICMTLAHDIKPGGILPATGGGARSVPWMRILASVTNRNIHVTV
SEDAALHGAASLAAYATSAEYLPTLAARAIVEIEPEPEVVASFEPLIAKHLELFRFAAALSY

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789987, Length=470, Percent_Identity=30, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI1787789, Length=458, Percent_Identity=25.3275109170306, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 48431; Mature: 48431

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILAIDLGTSGAKAAIIDSAGAVHEQTFVPYSTTKLPNGGVEQDPMQWVSAARQAVTRLP
CEEEEEECCCCCCEEEEECCCCCHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
RSYSVVSFTGQMQDLICLDRAGRPLGQALLYNDARAAAEAARLNTVVPEWKDITGNRQTA
CCCEEEEECCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCHH
TSTAAMWLRLMEQSDVSDVASVLFSPASFVVSQLECGLVCDETTASSTGLFDIHHRCWSD
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCCCCEEHHHHHCCCH
DIVQACGLRMDMLPTIASGFLDTVGADNCLGLPAGTKVVLSLGDAASTTCGIVGLGAGDD
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC
FVSLGTSGWHARVVSTVSDPSEVRQFALPDGGILRIASVLSVGGTADWARSVLLPGVSAK
CEECCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC
EADALMLQRPRLATGLLSLPSIQGESFPVRSHSVGGCILGMRGNQDPLTLYTAVIEGICM
CCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
TLAHDIKPGGILPATGGGARSVPWMRILASVTNRNIHVTVSEDAALHGAASLAAYATSAE
HHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCHH
YLPTLAARAIVEIEPEPEVVASFEPLIAKHLELFRFAAALSY
HHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILAIDLGTSGAKAAIIDSAGAVHEQTFVPYSTTKLPNGGVEQDPMQWVSAARQAVTRLP
CEEEEEECCCCCCEEEEECCCCCHHCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
RSYSVVSFTGQMQDLICLDRAGRPLGQALLYNDARAAAEAARLNTVVPEWKDITGNRQTA
CCCEEEEECCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHCCCCCCCHH
TSTAAMWLRLMEQSDVSDVASVLFSPASFVVSQLECGLVCDETTASSTGLFDIHHRCWSD
HHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCCCCEEHHHHHCCCH
DIVQACGLRMDMLPTIASGFLDTVGADNCLGLPAGTKVVLSLGDAASTTCGIVGLGAGDD
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC
FVSLGTSGWHARVVSTVSDPSEVRQFALPDGGILRIASVLSVGGTADWARSVLLPGVSAK
CEECCCCCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC
EADALMLQRPRLATGLLSLPSIQGESFPVRSHSVGGCILGMRGNQDPLTLYTAVIEGICM
CCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
TLAHDIKPGGILPATGGGARSVPWMRILASVTNRNIHVTVSEDAALHGAASLAAYATSAE
HHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCHH
YLPTLAARAIVEIEPEPEVVASFEPLIAKHLELFRFAAALSY
HHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1714034 [H]