| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is hisC [C]
Identifier: 38234252
GI number: 38234252
Start: 1718437
End: 1719471
Strand: Reverse
Name: hisC [C]
Synonym: DIP1681
Alternate gene names: 38234252
Gene position: 1719471-1718437 (Counterclockwise)
Preceding gene: 38234256
Following gene: 38234251
Centisome position: 69.09
GC content: 52.95
Gene sequence:
>1035_bases GTGTCACTTTCTAGGATTCACGGCGACGACGATGCCTTTGGGGCCCGCCTCGACTTTGCCGTCAACGTTGCCGAAGCCCA ACCACCTACATGGCTTATTCAACGCCTACAATCCGCCGTCACTGATCTAGCCGCCTATCCGCATTCCAGCGATCTAGCAG CAGTGACCGCTATGATCGCTCGCTACCACGGAGTAAGTGAAGACCACGTACTAGTTCTATCGGGAGTATCAGAAGGCTTC GCCATGTTGCCGCAGCTAAAGCCTGAAAACGCGGTGATTATCCATCCAGGTTTTAGCGAACCAGACATCGTTTTAACCGA CGCCCAGATCCCTGTTCATCGCTGCATCTTGGCGCCGCCATTCGAGCTTTCTTTTGAAAATATCCCCGCCAACGCAGACC TCGTGGTAATTGGTAACCCCACTAATCCCACAGGAGTCGTACATAGCAAAGAACTACTTGCTCAATTATGCGCGCCGGGG CGTACCGTGGTGATCGACGAAGCATTCTTGGACATCGTCGGAGAACAGTACTCGATGATCGATCAACTTGATGCGGTGGA AGGTGAACTGATTATCTTCCGCAGTCTGACAAAGACGTGGTCAATTGCGGGACTTCGAGTAGGCTACGCCATTGCCCGTC CGGAAACACTTGCGCGCTTAAGTGCGTATCGACGCCACTGGCCCATGGGTACCCTGCAGCTTCGAGCCATTGAGGCAGTT TTTGACACCGGTATCATGCAGTTGCCTGAGCGACGAGCAGAGATGATAGCGCAGCGTACCGAGATGATTGAGATGTTGAC CAACAGTGGCTTTAGGTGTGTGAGCAGCTCTCAAGCCCCGTATATCCTGGTGCGACCACCTAGCACGCAACCGGAAGAAC TACGAATGGCGTTAAAAGCTCAAGGAATCGCTGTTCGCCGATGCGATACTTTCCCAGGACTTGAGTTTTCCTATTGGCGC CTTGCGGTGCGTCCTCGTGACCAAGTACAACGGCTACTAACCGCCATCGACAACATTATTGGAGCAAAGAAGTAA
Upstream 100 bases:
>100_bases TAAAAGCCTCACGGATGCCGGGATAGGAATCAACCACAGTCCCGTCAACATCGATTAATAGAGTTCCCACACCCAGTAGT CTCCCACTAAAATCAACGCA
Downstream 100 bases:
>100_bases CGATGATCACCGTTTCAGATGTAAGAAAAGTAATGGATCGTGCGTATCCACCACACCTCGCGGAATCTTGGGATGCAGTA GGCCTTATCTGTGGTGATCC
Product: hypothetical protein
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSLSRIHGDDDAFGARLDFAVNVAEAQPPTWLIQRLQSAVTDLAAYPHSSDLAAVTAMIARYHGVSEDHVLVLSGVSEGF AMLPQLKPENAVIIHPGFSEPDIVLTDAQIPVHRCILAPPFELSFENIPANADLVVIGNPTNPTGVVHSKELLAQLCAPG RTVVIDEAFLDIVGEQYSMIDQLDAVEGELIIFRSLTKTWSIAGLRVGYAIARPETLARLSAYRRHWPMGTLQLRAIEAV FDTGIMQLPERRAEMIAQRTEMIEMLTNSGFRCVSSSQAPYILVRPPSTQPEELRMALKAQGIAVRRCDTFPGLEFSYWR LAVRPRDQVQRLLTAIDNIIGAKK
Sequences:
>Translated_344_residues MSLSRIHGDDDAFGARLDFAVNVAEAQPPTWLIQRLQSAVTDLAAYPHSSDLAAVTAMIARYHGVSEDHVLVLSGVSEGF AMLPQLKPENAVIIHPGFSEPDIVLTDAQIPVHRCILAPPFELSFENIPANADLVVIGNPTNPTGVVHSKELLAQLCAPG RTVVIDEAFLDIVGEQYSMIDQLDAVEGELIIFRSLTKTWSIAGLRVGYAIARPETLARLSAYRRHWPMGTLQLRAIEAV FDTGIMQLPERRAEMIAQRTEMIEMLTNSGFRCVSSSQAPYILVRPPSTQPEELRMALKAQGIAVRRCDTFPGLEFSYWR LAVRPRDQVQRLLTAIDNIIGAKK >Mature_343_residues SLSRIHGDDDAFGARLDFAVNVAEAQPPTWLIQRLQSAVTDLAAYPHSSDLAAVTAMIARYHGVSEDHVLVLSGVSEGFA MLPQLKPENAVIIHPGFSEPDIVLTDAQIPVHRCILAPPFELSFENIPANADLVVIGNPTNPTGVVHSKELLAQLCAPGR TVVIDEAFLDIVGEQYSMIDQLDAVEGELIIFRSLTKTWSIAGLRVGYAIARPETLARLSAYRRHWPMGTLQLRAIEAVF DTGIMQLPERRAEMIAQRTEMIEMLTNSGFRCVSSSQAPYILVRPPSTQPEELRMALKAQGIAVRRCDTFPGLEFSYWRL AVRPRDQVQRLLTAIDNIIGAKK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=308, Percent_Identity=27.9220779220779, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: 2.6.1.9
Molecular weight: Translated: 37959; Mature: 37828
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSRIHGDDDAFGARLDFAVNVAEAQPPTWLIQRLQSAVTDLAAYPHSSDLAAVTAMIA CCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RYHGVSEDHVLVLSGVSEGFAMLPQLKPENAVIIHPGFSEPDIVLTDAQIPVHRCILAPP HHCCCCCCCEEEEECCCCCHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCHHHEEECCC FELSFENIPANADLVVIGNPTNPTGVVHSKELLAQLCAPGRTVVIDEAFLDIVGEQYSMI CCCCCCCCCCCCCEEEECCCCCCCCCEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH DQLDAVEGELIIFRSLTKTWSIAGLRVGYAIARPETLARLSAYRRHWPMGTLQLRAIEAV HHHHHCCCCEEEEEEHHHHHHHHHEEECEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHH FDTGIMQLPERRAEMIAQRTEMIEMLTNSGFRCVSSSQAPYILVRPPSTQPEELRMALKA HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHH QGIAVRRCDTFPGLEFSYWRLAVRPRDQVQRLLTAIDNIIGAKK CCEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLSRIHGDDDAFGARLDFAVNVAEAQPPTWLIQRLQSAVTDLAAYPHSSDLAAVTAMIA CCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH RYHGVSEDHVLVLSGVSEGFAMLPQLKPENAVIIHPGFSEPDIVLTDAQIPVHRCILAPP HHCCCCCCCEEEEECCCCCHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCHHHEEECCC FELSFENIPANADLVVIGNPTNPTGVVHSKELLAQLCAPGRTVVIDEAFLDIVGEQYSMI CCCCCCCCCCCCCEEEECCCCCCCCCEEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH DQLDAVEGELIIFRSLTKTWSIAGLRVGYAIARPETLARLSAYRRHWPMGTLQLRAIEAV HHHHHCCCCEEEEEEHHHHHHHHHEEECEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHH FDTGIMQLPERRAEMIAQRTEMIEMLTNSGFRCVSSSQAPYILVRPPSTQPEELRMALKA HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHH QGIAVRRCDTFPGLEFSYWRLAVRPRDQVQRLLTAIDNIIGAKK CCEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-histidinol phosphate; 2-oxoglutarate
Specific reaction: L-histidinol phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate
General reaction: Amino group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]