| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234227
Identifier: 38234227
GI number: 38234227
Start: 1689384
End: 1690178
Strand: Reverse
Name: 38234227
Synonym: DIP1654
Alternate gene names: NA
Gene position: 1690178-1689384 (Counterclockwise)
Preceding gene: 38234228
Following gene: 38234226
Centisome position: 67.92
GC content: 51.57
Gene sequence:
>795_bases TTGCTTACCCCAGAAAAGACAGGTCGTTACAACCACTTCCAAGGCGGGTCTATCTACTGGTCTTCGGCAAGTGGAACCCA TATCATCTCCGGACCTATCCGTGAGTTCTGGGGAAGCCTAGGCTGGGAACGCAGCAGTTTGAAGTTCCCAACTGGTGAGC AATATTCAGCTGGTGGGGGAGTAAAGCAAGACTTCCAGGGTGGTTCAATCCAGTATTTCGAACCCACGGGAAAAGCACTA GCCGCTTTCGATAACAAGAATATTTCGAGCTACCGACAGATCTATCCACTGTTTAACACCACAGAATTCAAGCGGTGGCA TGCAGCAGGTGTCTACCGCGAAGTCATCCAAAACATGGATAAGTATTTCCCATTGTCAGGATGCCCAGATGAAATCACCG AAGGCTCTGTGTGCACCTTCACCGGTGTCGGCGGAGCCACAAGCAAGGTGACCGTTGACCGAATTTCTGATGAAGGGTTC TCACTTGTTACCGCTAGCGATCACCCTGAAGGCGGCGGCAGAACACTAAACATCCGATTCGATGAGGTGACGTCCCCTGC AGCAAAGGAGACTGGCGTTGTCTTCGATAGTGATGCTGTGAAGGCTGCATACACCGGCTCTGACAAAACATGGGTTCGTC TCGTAGTCGAATCCTTTGGTTCGACACGGATCTCAAAGGTTCAGGGACCATTTAGCTCCGATCATGTCGGTTCGCAGGTG TGGGGCAAGTTTGCCGGAAATCTGCGCTCGACGATCGACTCGTCTTCGACAACCTACATCCCGTTGTCGAAGTAG
Upstream 100 bases:
>100_bases TCCTGACACCGATGCCCACCAAGTCTGGGGAGGAATCCGAGACAAATGGGGGTAGCAGGGATGGGAAACTGGAGACCTCG GGTACCCAACGACGGACGAA
Downstream 100 bases:
>100_bases CCATCTTTTAAACAGCATCTATAAGTCAAGGAGTTACCCGTGTCTTCTATTTTTCGTCGATTCTCCGCAGGCGTACTAGC TAGTGTTATTGCCGCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: LGFP Repeat-Containing Protein; SCP-Like Extracellular; Peptidase S8 And; PS1 Protein; Mycoloyl Transferase; Glucose/Sorbosone Dehydrogenase; Secreted Protein
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MLTPEKTGRYNHFQGGSIYWSSASGTHIISGPIREFWGSLGWERSSLKFPTGEQYSAGGGVKQDFQGGSIQYFEPTGKAL AAFDNKNISSYRQIYPLFNTTEFKRWHAAGVYREVIQNMDKYFPLSGCPDEITEGSVCTFTGVGGATSKVTVDRISDEGF SLVTASDHPEGGGRTLNIRFDEVTSPAAKETGVVFDSDAVKAAYTGSDKTWVRLVVESFGSTRISKVQGPFSSDHVGSQV WGKFAGNLRSTIDSSSTTYIPLSK
Sequences:
>Translated_264_residues MLTPEKTGRYNHFQGGSIYWSSASGTHIISGPIREFWGSLGWERSSLKFPTGEQYSAGGGVKQDFQGGSIQYFEPTGKAL AAFDNKNISSYRQIYPLFNTTEFKRWHAAGVYREVIQNMDKYFPLSGCPDEITEGSVCTFTGVGGATSKVTVDRISDEGF SLVTASDHPEGGGRTLNIRFDEVTSPAAKETGVVFDSDAVKAAYTGSDKTWVRLVVESFGSTRISKVQGPFSSDHVGSQV WGKFAGNLRSTIDSSSTTYIPLSK >Mature_264_residues MLTPEKTGRYNHFQGGSIYWSSASGTHIISGPIREFWGSLGWERSSLKFPTGEQYSAGGGVKQDFQGGSIQYFEPTGKAL AAFDNKNISSYRQIYPLFNTTEFKRWHAAGVYREVIQNMDKYFPLSGCPDEITEGSVCTFTGVGGATSKVTVDRISDEGF SLVTASDHPEGGGRTLNIRFDEVTSPAAKETGVVFDSDAVKAAYTGSDKTWVRLVVESFGSTRISKVQGPFSSDHVGSQV WGKFAGNLRSTIDSSSTTYIPLSK
Specific function: Unknown
COG id: COG5479
COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28728; Mature: 28728
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPEKTGRYNHFQGGSIYWSSASGTHIISGPIREFWGSLGWERSSLKFPTGEQYSAGGG CCCCCCCCCCCCCCCCEEEEECCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCC VKQDFQGGSIQYFEPTGKALAAFDNKNISSYRQIYPLFNTTEFKRWHAAGVYREVIQNMD CCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH KYFPLSGCPDEITEGSVCTFTGVGGATSKVTVDRISDEGFSLVTASDHPEGGGRTLNIRF HHCCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEE DEVTSPAAKETGVVFDSDAVKAAYTGSDKTWVRLVVESFGSTRISKVQGPFSSDHVGSQV CCCCCCCCHHCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCEEHHCCCCCCCCCCCHHH WGKFAGNLRSTIDSSSTTYIPLSK HHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MLTPEKTGRYNHFQGGSIYWSSASGTHIISGPIREFWGSLGWERSSLKFPTGEQYSAGGG CCCCCCCCCCCCCCCCEEEEECCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCC VKQDFQGGSIQYFEPTGKALAAFDNKNISSYRQIYPLFNTTEFKRWHAAGVYREVIQNMD CCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH KYFPLSGCPDEITEGSVCTFTGVGGATSKVTVDRISDEGFSLVTASDHPEGGGRTLNIRF HHCCCCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEE DEVTSPAAKETGVVFDSDAVKAAYTGSDKTWVRLVVESFGSTRISKVQGPFSSDHVGSQV CCCCCCCCHHCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCEEHHCCCCCCCCCCCHHH WGKFAGNLRSTIDSSSTTYIPLSK HHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA