| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234228
Identifier: 38234228
GI number: 38234228
Start: 1690224
End: 1690688
Strand: Reverse
Name: 38234228
Synonym: DIP1655
Alternate gene names: NA
Gene position: 1690688-1690224 (Counterclockwise)
Preceding gene: 38234231
Following gene: 38234227
Centisome position: 67.94
GC content: 52.04
Gene sequence:
>465_bases ATGAAGAGTCTAAAACAACTAAGCGTAGTCGTTGCAGTATGTACGAGCATTTCTCTCGCAGGCACTGGTGTTGCGGGGGC CAATGTGTTTCATGGTCATTGGATTGGTGGGCGCATTGAAGAGGCATATCACCGCTTGGGTGGATGGAACACGTTTGGTG ATGCAACGACTGACGAACGCATCGCTAAGAACAACGGGCGTTTCCAGGTCTTTGCTAAAGATTCGTCTATCTACTGGCAT GCCGGGGTCGATAATGGTATAGCTCATCAGGTCGGTGGACGAATCCGCAACAAGTGGGGCGACCTTGGTTGGGAGGGCGC TGCATTGGGTTATCCGATTACCGATGAGCTCAAGACTCCAGATGGTGTTGGCCGGTTCAACCATTTTCAAGGTGGTTCCA TCTATTGGTCTCCTGACACCGATGCCCACCAAGTCTGGGGAGGAATCCGAGACAAATGGGGGTAG
Upstream 100 bases:
>100_bases TTCCAGTTGTCTCGCCGGGTAGAAGGTTTACTCTAAAGACTGCTGGCAAAAGTCAGTCACAAAGCTGTGTTCCTCCAAGT ACATAGGGAAGAGATCGCAA
Downstream 100 bases:
>100_bases CAGGGATGGGAAACTGGAGACCTCGGGTACCCAACGACGGACGAATTGCTTACCCCAGAAAAGACAGGTCGTTACAACCA CTTCCAAGGCGGGTCTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: LGFP Repeat-Containing Protein; Mycolyltransferase; SpoIID/LytB Domain; Peptidase S8 And; PS1 Protein; Mycoloyl Transferase; Trehalose Corynomycolyl Transferase; Glucose/Sorbosone Dehydrogenase; Secreted Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKSLKQLSVVVAVCTSISLAGTGVAGANVFHGHWIGGRIEEAYHRLGGWNTFGDATTDERIAKNNGRFQVFAKDSSIYWH AGVDNGIAHQVGGRIRNKWGDLGWEGAALGYPITDELKTPDGVGRFNHFQGGSIYWSPDTDAHQVWGGIRDKWG
Sequences:
>Translated_154_residues MKSLKQLSVVVAVCTSISLAGTGVAGANVFHGHWIGGRIEEAYHRLGGWNTFGDATTDERIAKNNGRFQVFAKDSSIYWH AGVDNGIAHQVGGRIRNKWGDLGWEGAALGYPITDELKTPDGVGRFNHFQGGSIYWSPDTDAHQVWGGIRDKWG >Mature_154_residues MKSLKQLSVVVAVCTSISLAGTGVAGANVFHGHWIGGRIEEAYHRLGGWNTFGDATTDERIAKNNGRFQVFAKDSSIYWH AGVDNGIAHQVGGRIRNKWGDLGWEGAALGYPITDELKTPDGVGRFNHFQGGSIYWSPDTDAHQVWGGIRDKWG
Specific function: Unknown
COG id: COG5479
COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16782; Mature: 16782
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLKQLSVVVAVCTSISLAGTGVAGANVFHGHWIGGRIEEAYHRLGGWNTFGDATTDER CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHH IAKNNGRFQVFAKDSSIYWHAGVDNGIAHQVGGRIRNKWGDLGWEGAALGYPITDELKTP HHCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DGVGRFNHFQGGSIYWSPDTDAHQVWGGIRDKWG CCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCC >Mature Secondary Structure MKSLKQLSVVVAVCTSISLAGTGVAGANVFHGHWIGGRIEEAYHRLGGWNTFGDATTDER CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHH IAKNNGRFQVFAKDSSIYWHAGVDNGIAHQVGGRIRNKWGDLGWEGAALGYPITDELKTP HHCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC DGVGRFNHFQGGSIYWSPDTDAHQVWGGIRDKWG CCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA