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The map label for this gene is qcrC

Identifier: 38234201

GI number: 38234201

Start: 1659850

End: 1660695

Strand: Reverse

Name: qcrC

Synonym: DIP1626

Alternate gene names: 38234201

Gene position: 1660695-1659850 (Counterclockwise)

Preceding gene: 38234202

Following gene: 38234200

Centisome position: 66.73

GC content: 53.55

Gene sequence:

>846_bases
ATGACCAACGCCAAGAAAGTCAGGGCACGTCGTAAAATCCGTCGTACCGCTGCAGGCGCTATGGCTCTTGCTGTCGGCTT
GACCGGTGCAGGCATTTTGGTCAACGCAGTAACTCCAGACGCACAGGTTGCTACTGCGCAACAAGACGAGCAGGCCCTTA
TCCAAGAAGGTAAGGATCTTTACGACGTTGCGTGTATCACCTGTCACGGTGCAAACCTTCAAGGTGTGAAGGACCGCGGT
CCTTCACTTATCGGCGTTGGCTCCGGTGCAACCTATTTCCAGGTTCACTCTGGCCGTATGCCAATGCTCCGTAATGAGGC
ACAAGCAAAGCGAAAGACACCTCGATACTCCGAGGCTCAGACTCTAGCGATTGCCGCATACGTCGAAGCTAATGGTGGCG
GCCCATCTATCGTTTACAACAAAGATGGTTCGGTAGCCATGGAGTCACTACGTGGCGCCAACTACAAAGATGGAATCGAT
CCAGCCGATGTCGCTCGCGGCTCCGATCTCTTCCGTTTGAACTGCGCATCTTGCCACAACTTCACTGGTCGTGGTGGTGC
TCTTTCCAGTGGCAAGTACGCTCCGGTTCTAGATCCAGCTAATGAGCAGGAAATCTACCAAGCCATGCTTACCGGTCCAC
AAAACATGCCGAAGTTCTCGGATCGTCAGCTTTCTGCAGACGAGAAGAAAGACATCATTGCCTACATCAAGTCGGCAAAA
GAAACCCCTAGCCAAGGTGGTTGGAACCTCGGTGGTCTTGGTCCTGTGACTGAGGGCATGATGATGTGGCTTGTTGGAAT
CGTGGTCCTGGTGGCCGCTGCCATGTGGATTGGATCGCGCTCATGA

Upstream 100 bases:

>100_bases
GTAAGAAAAAATAAGACCCTCAATTTCCGTATTCGAGACTCTAAGGGAAATGATGGAAACCACCCCTAACCCAATCGACT
CAGGCGCTGCCGAGAAGTCG

Downstream 100 bases:

>100_bases
GCAATAACCCTGAAATGAATTACACCTCCAAAGAATTGGACGCAATGTCGAACGAGGAACTCGCTCGTCTCGGCACTGAA
CTTGATGGCGTTACCGTTGC

Product: ubiquinol-cytochrome C reductase cytochrome C subunit

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome c subunit

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTNAKKVRARRKIRRTAAGAMALAVGLTGAGILVNAVTPDAQVATAQQDEQALIQEGKDLYDVACITCHGANLQGVKDRG
PSLIGVGSGATYFQVHSGRMPMLRNEAQAKRKTPRYSEAQTLAIAAYVEANGGGPSIVYNKDGSVAMESLRGANYKDGID
PADVARGSDLFRLNCASCHNFTGRGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAK
ETPSQGGWNLGGLGPVTEGMMMWLVGIVVLVAAAMWIGSRS

Sequences:

>Translated_281_residues
MTNAKKVRARRKIRRTAAGAMALAVGLTGAGILVNAVTPDAQVATAQQDEQALIQEGKDLYDVACITCHGANLQGVKDRG
PSLIGVGSGATYFQVHSGRMPMLRNEAQAKRKTPRYSEAQTLAIAAYVEANGGGPSIVYNKDGSVAMESLRGANYKDGID
PADVARGSDLFRLNCASCHNFTGRGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAK
ETPSQGGWNLGGLGPVTEGMMMWLVGIVVLVAAAMWIGSRS
>Mature_280_residues
TNAKKVRARRKIRRTAAGAMALAVGLTGAGILVNAVTPDAQVATAQQDEQALIQEGKDLYDVACITCHGANLQGVKDRGP
SLIGVGSGATYFQVHSGRMPMLRNEAQAKRKTPRYSEAQTLAIAAYVEANGGGPSIVYNKDGSVAMESLRGANYKDGIDP
ADVARGSDLFRLNCASCHNFTGRGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAKE
TPSQGGWNLGGLGPVTEGMMMWLVGIVVLVAAAMWIGSRS

Specific function: Component of the menaquinol-cytochrome c reductase complex

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QCRC_CORDI (Q6NGA1)

Other databases:

- EMBL:   BX248358
- RefSeq:   NP_939968.1
- ProteinModelPortal:   Q6NGA1
- GeneID:   2648672
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1626
- NMPDR:   fig|257309.1.peg.1559
- HOGENOM:   HBG510467
- OMA:   QVGTGRM
- ProtClustDB:   CLSK872024
- BioCyc:   CDIP257309:DIP1626-MONOMER
- GO:   GO:0006810
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152
- Gene3D:   G3DSA:1.10.760.10
- PIRSF:   PIRSF000007

Pfam domain/function: PF00034 Cytochrom_C; SSF46626 Cytochrome_c

EC number: NA

Molecular weight: Translated: 29735; Mature: 29604

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS51007 CYTC

Important sites: BINDING 65-65 BINDING 68-68 BINDING 175-175 BINDING 178-178

Signals:

None

Transmembrane regions:

HASH(0xd2f8164)-; HASH(0x451fcf18)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAKKVRARRKIRRTAAGAMALAVGLTGAGILVNAVTPDAQVATAQQDEQALIQEGKDL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHHCCCCE
YDVACITCHGANLQGVKDRGPSLIGVGSGATYFQVHSGRMPMLRNEAQAKRKTPRYSEAQ
EEEEEEEEECCCCCCHHCCCCCEEEECCCCEEEEEECCCCCHHHCHHHHHHCCCCCCCCC
TLAIAAYVEANGGGPSIVYNKDGSVAMESLRGANYKDGIDPADVARGSDLFRLNCASCHN
EEEEEEEEEECCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEECHHHCC
FTGRGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
ETPSQGGWNLGGLGPVTEGMMMWLVGIVVLVAAAMWIGSRS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure 
TNAKKVRARRKIRRTAAGAMALAVGLTGAGILVNAVTPDAQVATAQQDEQALIQEGKDL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHHHCCCCE
YDVACITCHGANLQGVKDRGPSLIGVGSGATYFQVHSGRMPMLRNEAQAKRKTPRYSEAQ
EEEEEEEEECCCCCCHHCCCCCEEEECCCCEEEEEECCCCCHHHCHHHHHHCCCCCCCCC
TLAIAAYVEANGGGPSIVYNKDGSVAMESLRGANYKDGIDPADVARGSDLFRLNCASCHN
EEEEEEEEEECCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEECHHHCC
FTGRGGALSSGKYAPVLDPANEQEIYQAMLTGPQNMPKFSDRQLSADEKKDIIAYIKSAK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
ETPSQGGWNLGGLGPVTEGMMMWLVGIVVLVAAAMWIGSRS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14602910