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The map label for this gene is qcrA

Identifier: 38234200

GI number: 38234200

Start: 1658633

End: 1659853

Strand: Reverse

Name: qcrA

Synonym: DIP1625

Alternate gene names: 38234200

Gene position: 1659853-1658633 (Counterclockwise)

Preceding gene: 38234201

Following gene: 38234199

Centisome position: 66.7

GC content: 51.92

Gene sequence:

>1221_bases
ATGAGCAATAACCCTGAAATGAATTACACCTCCAAAGAATTGGACGCAATGTCGAACGAGGAACTCGCTCGTCTCGGCAC
TGAACTTGATGGCGTTACCGTTGCTTACCGCAAGGAGCGCTTCCCAGTTGAGGGCGACCCAGCATCTAAGCGTGCATCTC
GCACCGTTGGAATCTGGTTCGGTATTGGCATCGTATCTGCCCTTGCTTTCCTCGCTGTTTATCTCTTCATGCCATGGGAG
TACAAGGGTCTAGGCGAAGATGGTCTGTGGATTTACACCTTCTACACTCCATTGCTTGGCCTTACCTCTGGTCTTGCGAT
TCTTTCGCTTGGCATCGGCGTGATCTTCTACATTAAGAAGATCATTCCTTCTGAAATCTCGGTTCAGCGTCGTCACGACG
GTCCATCCGAAGAAATCGACCGTCGTACCATCACAGCTTTGCTGAATGACTCTTGGGAAACTTCCACCTTGGGTCGTCGC
AAGGTATTGAAGTCCATGCTCGGCATCGGTGGTGTTCTCGCTGGTCTTACCATCATCGCCCCACTTGGTGGCATGGTGAA
GAACCCTTGGAAGAAGGGCGAACTCGGCATTCAAGGTGATGGAACCTTGTGGACCTCCGGCTGGACCTTGCATGAAAAAG
GCGTCAAGCTTTACCTAGGTCGTGACACCGGTGTTACAGCTGAGAAGCACGAAACGTCTGTTGGAACTCATTACAGCACC
CAAGGTGTGTCCCGCTTGATTCGTATGCGTCCTGAAGATTTGGCTGCAGCGGCTATGGAGACTGTGTTCCCATTGCCAGC
AGAATTCGTCAACGATGGTGATAAGTATGATGCCAGCGCTGATGTTTACGAAGAACAGATGCACTCTATCCACGGTCCAC
GTAACGCTGTTATGTTGATCCGGTTGCGTAACAGTGACGCAAATAAAGTGATCGAACGTGAGGGGCAGGAAGACTTCCAC
TACGGCGATTACTACGCATACTCAAAGATCTGCACGCACATTGGTTGCCCAACTTCTTTGTACGAAGCTCAAACCAACCG
AATTTTGTGCCCGTGCCACCAGTCGCAGTTTGATGCATTGCACTACGGCAAGCCAGTCTTCGGCCCAGCCGCACGTGCGT
TGCCACAGCTGCCGATTACCGTTGACGAAGAGGGTTACCTCGTCGCCGCAGGCAACTTCATTGAGCCTGTCGGCCCAGCA
TTCTGGGAGCGTCGTTCATGA

Upstream 100 bases:

>100_bases
GGAACCTCGGTGGTCTTGGTCCTGTGACTGAGGGCATGATGATGTGGCTTGTTGGAATCGTGGTCCTGGTGGCCGCTGCC
ATGTGGATTGGATCGCGCTC

Downstream 100 bases:

>100_bases
GCAATAAACTAGCCGAAATCGGCAATAACATTGATTCGCGTTACACCGCGGCTTCGGGTATCCGTCGACAGATCAACAAG
GTTTTCCCAACGCACTGGTC

Product: ubiquinol-cytochrome C reductase iron-sulfur protein

Products: NA

Alternate protein names: Cytochrome bc1 complex Rieske iron-sulfur protein; Rieske iron-sulfur protein

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSNNPEMNYTSKELDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWFGIGIVSALAFLAVYLFMPWE
YKGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKKIIPSEISVQRRHDGPSEEIDRRTITALLNDSWETSTLGRR
KVLKSMLGIGGVLAGLTIIAPLGGMVKNPWKKGELGIQGDGTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYST
QGVSRLIRMRPEDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLIRLRNSDANKVIEREGQEDFH
YGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPAARALPQLPITVDEEGYLVAAGNFIEPVGPA
FWERRS

Sequences:

>Translated_406_residues
MSNNPEMNYTSKELDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWFGIGIVSALAFLAVYLFMPWE
YKGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKKIIPSEISVQRRHDGPSEEIDRRTITALLNDSWETSTLGRR
KVLKSMLGIGGVLAGLTIIAPLGGMVKNPWKKGELGIQGDGTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYST
QGVSRLIRMRPEDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLIRLRNSDANKVIEREGQEDFH
YGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPAARALPQLPITVDEEGYLVAAGNFIEPVGPA
FWERRS
>Mature_405_residues
SNNPEMNYTSKELDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWFGIGIVSALAFLAVYLFMPWEY
KGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKKIIPSEISVQRRHDGPSEEIDRRTITALLNDSWETSTLGRRK
VLKSMLGIGGVLAGLTIIAPLGGMVKNPWKKGELGIQGDGTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYSTQ
GVSRLIRMRPEDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLIRLRNSDANKVIEREGQEDFHY
GDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDALHYGKPVFGPAARALPQLPITVDEEGYLVAAGNFIEPVGPAF
WERRS

Specific function: Component of the menaquinol-cytochrome c reductase complex. The Rieske protein is a high potential 2Fe-2S protein

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QCRA_CORDI (Q6NGA2)

Other databases:

- EMBL:   BX248358
- RefSeq:   NP_939967.1
- ProteinModelPortal:   Q6NGA2
- SMR:   Q6NGA2
- GeneID:   2648671
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1625
- NMPDR:   fig|257309.1.peg.1558
- HOGENOM:   HBG431016
- OMA:   GCPTSLY
- ProtClustDB:   CLSK2754362
- BioCyc:   CDIP257309:DIP1625-MONOMER
- GO:   GO:0006810
- InterPro:   IPR017941
- Gene3D:   G3DSA:2.102.10.10

Pfam domain/function: PF00355 Rieske; SSF50022 Rieske_dom

EC number: NA

Molecular weight: Translated: 44958; Mature: 44827

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS51296 RIESKE; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcf93328)-; HASH(0xd25e87c)-; HASH(0xd1879bc)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNPEMNYTSKELDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWF
CCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHCCEEEHHH
GIGIVSALAFLAVYLFMPWEYKGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIPSEISVQRRHDGPSEEIDRRTITALLNDSWETSTLGRRKVLKSMLGIGGVLAGLTIIA
HCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLGGMVKNPWKKGELGIQGDGTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYST
HCCHHHCCCCCCCCCCCCCCCCEEECCCEEECCCEEEEEECCCCCCCHHHCCCCCCCCCH
QGVSRLIRMRPEDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLI
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE
RLRNSDANKVIEREGQEDFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDAL
EECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCHH
HYGKPVFGPAARALPQLPITVDEEGYLVAAGNFIEPVGPAFWERRS
HCCCCCCCHHHHHCCCCCEEECCCCEEEEECCCCCCCCHHHHCCCH
>Mature Secondary Structure 
SNNPEMNYTSKELDAMSNEELARLGTELDGVTVAYRKERFPVEGDPASKRASRTVGIWF
CCCCCCCCCHHHHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHCCEEEHHH
GIGIVSALAFLAVYLFMPWEYKGLGEDGLWIYTFYTPLLGLTSGLAILSLGIGVIFYIKK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIPSEISVQRRHDGPSEEIDRRTITALLNDSWETSTLGRRKVLKSMLGIGGVLAGLTIIA
HCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLGGMVKNPWKKGELGIQGDGTLWTSGWTLHEKGVKLYLGRDTGVTAEKHETSVGTHYST
HCCHHHCCCCCCCCCCCCCCCCEEECCCEEECCCEEEEEECCCCCCCHHHCCCCCCCCCH
QGVSRLIRMRPEDLAAAAMETVFPLPAEFVNDGDKYDASADVYEEQMHSIHGPRNAVMLI
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEE
RLRNSDANKVIEREGQEDFHYGDYYAYSKICTHIGCPTSLYEAQTNRILCPCHQSQFDAL
EECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEECCCCCCCCHH
HYGKPVFGPAARALPQLPITVDEEGYLVAAGNFIEPVGPAFWERRS
HCCCCCCCHHHHHCCCCCEEECCCCEEEEECCCCCCCCHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14602910