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The map label for this gene is pimB [H]

Identifier: 38234195

GI number: 38234195

Start: 1653283

End: 1654416

Strand: Reverse

Name: pimB [H]

Synonym: DIP1620

Alternate gene names: 38234195

Gene position: 1654416-1653283 (Counterclockwise)

Preceding gene: 38234196

Following gene: 38234194

Centisome position: 66.48

GC content: 50.97

Gene sequence:

>1134_bases
GTGCCAAGGCTGTTATTAGTAACCAACGATTTTCCTCCGACTGTGGGAGGTATTCAGTCCTATTTGCGGGATTTTGTGGC
TCTTTTGCCGCCTGAAGACGTTGTGGTTTTTGCGTCTACACAAGATCCGGTGGCAGCGCGGGAATTTGATAAGAGTGTTC
CTTATAAGGTGGTTCGGTATTCGAGTAAGCTAATGCTGCCAACACCGCAGGTGAAAAAGCTGATGGTCGATCTGATTAAA
AGTGAAGGCGTATCGACGGTTTGGTTTGGGGCTGCGGCACCGTTAGCTGTCATGGCTCCTGCTGCTAGGGCTGCGGGGGC
AATTCAAATTATCTCTACCACTCATGGTCATGAGGTTGGGTGGTCGATGGTTCCAGGTGCGCGTAGTGTGTTGCGTTTTA
TTGGTCAACATTCCGATGTGGTGACCTACATTTCGGACTACACATTGCGAAGGTTCCGGAGGGCTTTTGGTGAGCATCCG
AAATTTGTTCATTTGCCCTCGGGGGTTGATGTTGAACGCTTTTATCCTGTGGACGAAAAACAGAAGTTCGAACTGCGCGA
TCAATTGGGGTGGGCGGAAAAAGACAAAGTTATCGTGTGTACTTCTCGATTGGTGCCGCGTAAAGGTCAAGATACGCTTA
TTAAAGCGTTTCCAGAGATTGTTCAGCGTTGTTCTGAGGCACGACTGGTGATTGTGGGGGAGGGGCGCATTGAGGGGAAG
CTACGTCGATTAGCAGCGCGTGATCAAAAGGCGAGTTCTCGTATCTCTTTTGAGGGGCGGGTATCTGAGGAAAAGATGGG
CATGATGCTGCGCGGCGCTGATGTGTTCGCTATGCCGTGTCGTACTCGCGGAGGTGGTCTTGATGTTGAAGGACTGGGTA
TTGTCTTTTTGGAGGCTCAAGCGTGTGGCGTTCCGGTGATCGCAGGTGATTCGGGGGGAGCGCCCGAAACTGTGACACCT
GCATCCGGTGTTGTGGTTAATGGTCGAGATTCGTCGAGTGTAGCTCATGTCATCGTCGACCTTGTGCAACAACCAGCTGC
GCTTATGTCGATGGGGCATGCCGGCCGTCAACATGTAGTTGACCATTGGACTTGGGAGATTATGGGTGCTCGGTTGAAGT
CTTTAATTCTTTAA

Upstream 100 bases:

>100_bases
TTCATGCTTCGGATTATGGAATTCCAGTGCAAGTTGTGCCGGTTAACTCTATGCCGATTTATGGGGCGCGTCGTTACTAG
CTGTTTGCTACAGTGTTGGC

Downstream 100 bases:

>100_bases
GTGTGATGAAATTGTGCGAGCCTAGTGGCTGCTGCGTTGTGAAGTTCTGCCGTGTCGTCGATATACTTGGAAAGCTATGG
CTTGTGCCATTGTGGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha-D-mannose-alpha-(1-6)-phosphatidylmyo-inositol-mannosyltransferase; Alpha-mannosyltransferase; Alpha-manT; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPRLLLVTNDFPPTVGGIQSYLRDFVALLPPEDVVVFASTQDPVAAREFDKSVPYKVVRYSSKLMLPTPQVKKLMVDLIK
SEGVSTVWFGAAAPLAVMAPAARAAGAIQIISTTHGHEVGWSMVPGARSVLRFIGQHSDVVTYISDYTLRRFRRAFGEHP
KFVHLPSGVDVERFYPVDEKQKFELRDQLGWAEKDKVIVCTSRLVPRKGQDTLIKAFPEIVQRCSEARLVIVGEGRIEGK
LRRLAARDQKASSRISFEGRVSEEKMGMMLRGADVFAMPCRTRGGGLDVEGLGIVFLEAQACGVPVIAGDSGGAPETVTP
ASGVVVNGRDSSSVAHVIVDLVQQPAALMSMGHAGRQHVVDHWTWEIMGARLKSLIL

Sequences:

>Translated_377_residues
MPRLLLVTNDFPPTVGGIQSYLRDFVALLPPEDVVVFASTQDPVAAREFDKSVPYKVVRYSSKLMLPTPQVKKLMVDLIK
SEGVSTVWFGAAAPLAVMAPAARAAGAIQIISTTHGHEVGWSMVPGARSVLRFIGQHSDVVTYISDYTLRRFRRAFGEHP
KFVHLPSGVDVERFYPVDEKQKFELRDQLGWAEKDKVIVCTSRLVPRKGQDTLIKAFPEIVQRCSEARLVIVGEGRIEGK
LRRLAARDQKASSRISFEGRVSEEKMGMMLRGADVFAMPCRTRGGGLDVEGLGIVFLEAQACGVPVIAGDSGGAPETVTP
ASGVVVNGRDSSSVAHVIVDLVQQPAALMSMGHAGRQHVVDHWTWEIMGARLKSLIL
>Mature_376_residues
PRLLLVTNDFPPTVGGIQSYLRDFVALLPPEDVVVFASTQDPVAAREFDKSVPYKVVRYSSKLMLPTPQVKKLMVDLIKS
EGVSTVWFGAAAPLAVMAPAARAAGAIQIISTTHGHEVGWSMVPGARSVLRFIGQHSDVVTYISDYTLRRFRRAFGEHPK
FVHLPSGVDVERFYPVDEKQKFELRDQLGWAEKDKVIVCTSRLVPRKGQDTLIKAFPEIVQRCSEARLVIVGEGRIEGKL
RRLAARDQKASSRISFEGRVSEEKMGMMLRGADVFAMPCRTRGGGLDVEGLGIVFLEAQACGVPVIAGDSGGAPETVTPA
SGVVVNGRDSSSVAHVIVDLVQQPAALMSMGHAGRQHVVDHWTWEIMGARLKSLIL

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose resid

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 41180; Mature: 41049

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLLLVTNDFPPTVGGIQSYLRDFVALLPPEDVVVFASTQDPVAAREFDKSVPYKVVRY
CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEE
SSKLMLPTPQVKKLMVDLIKSEGVSTVWFGAAAPLAVMAPAARAAGAIQIISTTHGHEVG
CCEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHCCEEEEEEECCCCCCC
WSMVPGARSVLRFIGQHSDVVTYISDYTLRRFRRAFGEHPKFVHLPSGVDVERFYPVDEK
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCCC
QKFELRDQLGWAEKDKVIVCTSRLVPRKGQDTLIKAFPEIVQRCSEARLVIVGEGRIEGK
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
LRRLAARDQKASSRISFEGRVSEEKMGMMLRGADVFAMPCRTRGGGLDVEGLGIVFLEAQ
HHHHHHHHHHHHCCEEECCCCCHHHHCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEEC
ACGVPVIAGDSGGAPETVTPASGVVVNGRDSSSVAHVIVDLVQQPAALMSMGHAGRQHVV
CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHH
DHWTWEIMGARLKSLIL
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRLLLVTNDFPPTVGGIQSYLRDFVALLPPEDVVVFASTQDPVAAREFDKSVPYKVVRY
CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEE
SSKLMLPTPQVKKLMVDLIKSEGVSTVWFGAAAPLAVMAPAARAAGAIQIISTTHGHEVG
CCEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCHHHHCCEEEEEEECCCCCCC
WSMVPGARSVLRFIGQHSDVVTYISDYTLRRFRRAFGEHPKFVHLPSGVDVERFYPVDEK
CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCCC
QKFELRDQLGWAEKDKVIVCTSRLVPRKGQDTLIKAFPEIVQRCSEARLVIVGEGRIEGK
HHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHH
LRRLAARDQKASSRISFEGRVSEEKMGMMLRGADVFAMPCRTRGGGLDVEGLGIVFLEAQ
HHHHHHHHHHHHCCEEECCCCCHHHHCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEEC
ACGVPVIAGDSGGAPETVTPASGVVVNGRDSSSVAHVIVDLVQQPAALMSMGHAGRQHVV
CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHH
DHWTWEIMGARLKSLIL
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]