| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233851
Identifier: 38233851
GI number: 38233851
Start: 1269829
End: 1270878
Strand: Direct
Name: 38233851
Synonym: DIP1263
Alternate gene names: NA
Gene position: 1269829-1270878 (Clockwise)
Preceding gene: 38233840
Following gene: 38233852
Centisome position: 51.03
GC content: 47.81
Gene sequence:
>1050_bases TTGCTGGTAACCTCTCTGGTTGTGAAACCTGCACTGTCTACGACTCTCAAAATGTGTACATTTTCTACTCTCTCCGCATT TGTGTTGACCGCATGTAGCGGCAATGCAGAAACAACGAATGTGGCAGAAATCCAGCACGACATGGGAAGTGCTACCGCAG CAGCTTCCCCGAAGGCTACAGCCCCCGAGGGAACTGTACTCAAGCGCAGTGCAATTGATGCGCTTCAAACGGTGGGAAAT TCGATTGGAATCAAGATAGGTTCCCACCTAGAGCTCGGGTCTGCTGCAGATTTTGAAAAAGGTAACACGACTAAAGTGTC TATTGACGCTGAGTGCTTTGATATGACATCGAGCTCAAAGGCTTTCATTGTTGCTTGTTCCGACGGCGTGCATTCTGTTG ATCCAGTATCGGGTAAAAATTCAGTAATCGCTCAGCCAACTGAAACTGCCCACTATGCGGTACAAGTATCAACCGGAGAA GTTCTCGTAGCGCATCGTGACTCGAATAAGGTTGAGGTATTTAACGATGGTGAAAAGCTCTCAGAGGTGGCAACTGAATA CGGGTCTGATCAACTTATTTCAGTTCCGATCGAAGGACAAGCTGATGCAGTTGTCAGAATCAATAACAAATACACCTTGA TTCAAGACGTAAATTGGAAAGAGTCAAAACCCGGTGCCATTTTGCGGGTAGGCAAAGGGGTTGGAAGGATATCTGCAGCT AAGCAAGGCGTTGTGCTCGCTTCAGACGCCAAGAAGAATCAGTTTGCAGTGTACGGTGCTAAAGACGTCATCCGGCTTCA CCAAACCTCTCCGACGGGGCCTAGTCCTTGGGGTATTACTTGGGACAACAAGCATGACCTAGCTTGGGTCGCTACTACTG GAGATAACAAGGTGACTGGTTACGATATTTCATCCGGAACCGGATCCGAAAAAAGCTCATATAACACTATCGAAAACGTC CACAACATTGCCGTGCTTGACGACGGTACTTTGGTGCTCGCATCCGCATCTGGAGCAGGCCTCCAACTTGTTAAAAGCCA AACAGACTAA
Upstream 100 bases:
>100_bases GGGCACAAGAATACCTGTTCAAAGTCCAACATATGTCAGTGATGCAGAACTACATGGATATGCCTAATCTTCCTCGGGTT TCAACTAGGAAGAATGCAAC
Downstream 100 bases:
>100_bases TGCCCCACACACCTTTAAAATAGCGAAAGGCCTATCCACCATGTCGGATTTTTCATCTCATCCTTTGCGAACTAAAGCAT ACGCACTTGCGCTAAAAGGG
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; Lipoprotein LppL; SMP-30/Gluconolaconase/LRE Domain-Containing Protein; Prolipoprotein; LppL Protein
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MLVTSLVVKPALSTTLKMCTFSTLSAFVLTACSGNAETTNVAEIQHDMGSATAAASPKATAPEGTVLKRSAIDALQTVGN SIGIKIGSHLELGSAADFEKGNTTKVSIDAECFDMTSSSKAFIVACSDGVHSVDPVSGKNSVIAQPTETAHYAVQVSTGE VLVAHRDSNKVEVFNDGEKLSEVATEYGSDQLISVPIEGQADAVVRINNKYTLIQDVNWKESKPGAILRVGKGVGRISAA KQGVVLASDAKKNQFAVYGAKDVIRLHQTSPTGPSPWGITWDNKHDLAWVATTGDNKVTGYDISSGTGSEKSSYNTIENV HNIAVLDDGTLVLASASGAGLQLVKSQTD
Sequences:
>Translated_349_residues MLVTSLVVKPALSTTLKMCTFSTLSAFVLTACSGNAETTNVAEIQHDMGSATAAASPKATAPEGTVLKRSAIDALQTVGN SIGIKIGSHLELGSAADFEKGNTTKVSIDAECFDMTSSSKAFIVACSDGVHSVDPVSGKNSVIAQPTETAHYAVQVSTGE VLVAHRDSNKVEVFNDGEKLSEVATEYGSDQLISVPIEGQADAVVRINNKYTLIQDVNWKESKPGAILRVGKGVGRISAA KQGVVLASDAKKNQFAVYGAKDVIRLHQTSPTGPSPWGITWDNKHDLAWVATTGDNKVTGYDISSGTGSEKSSYNTIENV HNIAVLDDGTLVLASASGAGLQLVKSQTD >Mature_349_residues MLVTSLVVKPALSTTLKMCTFSTLSAFVLTACSGNAETTNVAEIQHDMGSATAAASPKATAPEGTVLKRSAIDALQTVGN SIGIKIGSHLELGSAADFEKGNTTKVSIDAECFDMTSSSKAFIVACSDGVHSVDPVSGKNSVIAQPTETAHYAVQVSTGE VLVAHRDSNKVEVFNDGEKLSEVATEYGSDQLISVPIEGQADAVVRINNKYTLIQDVNWKESKPGAILRVGKGVGRISAA KQGVVLASDAKKNQFAVYGAKDVIRLHQTSPTGPSPWGITWDNKHDLAWVATTGDNKVTGYDISSGTGSEKSSYNTIENV HNIAVLDDGTLVLASASGAGLQLVKSQTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36441; Mature: 36441
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVTSLVVKPALSTTLKMCTFSTLSAFVLTACSGNAETTNVAEIQHDMGSATAAASPKAT CEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCC APEGTVLKRSAIDALQTVGNSIGIKIGSHLELGSAADFEKGNTTKVSIDAECFDMTSSSK CCCCCEEHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCEEEEEECCCEEECCCCCC AFIVACSDGVHSVDPVSGKNSVIAQPTETAHYAVQVSTGEVLVAHRDSNKVEVFNDGEKL EEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCEEEEEECCCCEEEEEECCHHH SEVATEYGSDQLISVPIEGQADAVVRINNKYTLIQDVNWKESKPGAILRVGKGVGRISAA HHHHHHCCCCCEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEECCCCCCCHHC KQGVVLASDAKKNQFAVYGAKDVIRLHQTSPTGPSPWGITWDNKHDLAWVATTGDNKVTG CCCEEEECCCCCCEEEEECCHHEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCEEEE YDISSGTGSEKSSYNTIENVHNIAVLDDGTLVLASASGAGLQLVKSQTD EECCCCCCCCCCCCHHHHHCEEEEEEECCEEEEEECCCCCEEEEECCCC >Mature Secondary Structure MLVTSLVVKPALSTTLKMCTFSTLSAFVLTACSGNAETTNVAEIQHDMGSATAAASPKAT CEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCC APEGTVLKRSAIDALQTVGNSIGIKIGSHLELGSAADFEKGNTTKVSIDAECFDMTSSSK CCCCCEEHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCEEEEEECCCEEECCCCCC AFIVACSDGVHSVDPVSGKNSVIAQPTETAHYAVQVSTGEVLVAHRDSNKVEVFNDGEKL EEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCEEEEEECCCCEEEEEECCHHH SEVATEYGSDQLISVPIEGQADAVVRINNKYTLIQDVNWKESKPGAILRVGKGVGRISAA HHHHHHCCCCCEEEEECCCCCCEEEEECCEEEEEEECCCCCCCCCEEEEECCCCCCCHHC KQGVVLASDAKKNQFAVYGAKDVIRLHQTSPTGPSPWGITWDNKHDLAWVATTGDNKVTG CCCEEEECCCCCCEEEEECCHHEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCEEEE YDISSGTGSEKSSYNTIENVHNIAVLDDGTLVLASASGAGLQLVKSQTD EECCCCCCCCCCCCHHHHHCEEEEEEECCEEEEEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA