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The map label for this gene is ybaQ [C]

Identifier: 38233840

GI number: 38233840

Start: 1255902

End: 1256171

Strand: Direct

Name: ybaQ [C]

Synonym: DIP1252

Alternate gene names: 38233840

Gene position: 1255902-1256171 (Clockwise)

Preceding gene: 38233839

Following gene: 38233851

Centisome position: 50.47

GC content: 45.56

Gene sequence:

>270_bases
ATGTCGAGTGCACACGCTCCGTTCAATCCAGTGCCCCGCCATCCTGGCAAGGTACTGGAAACCGAGTATCTTGTCCCACA
AAATATCTCGCATTATGACCTTGCCAAACAACTGCATATCACAGAAACATCTCTTGATCATTTCATCGCAGGTGAAACCG
ACGTAGACTATGTTTTGGCTTTCGGTCTTGCCCATGTTTTCAGAGAATCACCAGAATTATGGATTCGCAGACAACAAGAT
TGGGACACTTTTTTAGAGCAAGAGCACTAG

Upstream 100 bases:

>100_bases
AGGCTAACCAAGGTGGAGCTTGAAGCCTGATCCCGCATAGCATGGAATAAGACTACAGCTATTGCAGGAAAGGGTGGAAA
GTATTGTGCTGAATTCCAGA

Downstream 100 bases:

>100_bases
AAGCCGATCAAAGCGGGAAGCGGCCATTGTATGGTACCTGCTTCCCGCTTAATTACCTTTTAGAAAAGGCCTTTAATCTC
TCCATTTTCAACTCCGATGT

Product: putative virulence-associated protein

Products: NA

Alternate protein names: Virulence-Associated Protein

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSLDHFIAGETDVDYVLAFGLAHVFRESPELWIRRQQD
WDTFLEQEH

Sequences:

>Translated_89_residues
MSSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSLDHFIAGETDVDYVLAFGLAHVFRESPELWIRRQQD
WDTFLEQEH
>Mature_88_residues
SSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSLDHFIAGETDVDYVLAFGLAHVFRESPELWIRRQQDW
DTFLEQEH

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10368; Mature: 10236

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSLDHFIAGETDVDYVLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHCHHHHHCCCCCHHHHHH
FGLAHVFRESPELWIRRQQDWDTFLEQEH
HHHHHHHHCCCHHEEECCCHHHHHHCCCC
>Mature Secondary Structure 
SSAHAPFNPVPRHPGKVLETEYLVPQNISHYDLAKQLHITETSLDHFIAGETDVDYVLA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHCHHHHHCCCCCHHHHHH
FGLAHVFRESPELWIRRQQDWDTFLEQEH
HHHHHHHHCCCHHEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA