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The map label for this gene is bioD1 [H]

Identifier: 38233779

GI number: 38233779

Start: 1187512

End: 1188117

Strand: Direct

Name: bioD1 [H]

Synonym: DIP1189

Alternate gene names: 38233779

Gene position: 1187512-1188117 (Clockwise)

Preceding gene: 38233778

Following gene: 38233781

Centisome position: 47.72

GC content: 50.99

Gene sequence:

>606_bases
GTGGGTATCGTCGTTGTGTCTGGTTTAGCGTCGGGAGTGGGCAAGACGACGGCAACCGCAGCGATCGTGAAAATCTTGCA
AGCAAAAGGTAGGGATGTTGTGCCAGCTAAGATCGCTCGATTGCAAAACCTGTGTGCTTCTCCAGATATTGGCACAATTG
AAAAGTTAACGGGTATCCGAGGAGAGGACTTTTCGCAGTTGGATGATCCGTTGGTTCAAGTGTGTCATCTCTCTGAATCG
GGCAAAACTGTTGTGGTTGAGGGGTCTGGTGGGCTGAGTGTTGCCTTAATAGGAAAGAAAACAATTGCGGATATTGCAGC
TGAACTAGATGCTCCGTTGGTAGTTGTCTCGGGAATGAATCGCGGTGCTGTAGAACTTGCAGTAAATGCCGTTGGTTTCG
CTCGAGCATGTGGGGCAAATGTTGCGGGCTTGTTGGGGGGAAAACTGCCGGCGGGTGCAGATCTACGTACTCGTTTAACT
CTAGTGGAGGCGTCGCGTGCGTCTGGAGTGCCATTTATTGGCAGTTTGAACGATGGCGTAGGCTCGCTTGGTTGCGAGCC
ATTTGCAGAGGCATTGTCGACGATTTTCATTCCCGACGAGTGGTAA

Upstream 100 bases:

>100_bases
TACATATGGGGGAGGCTCACATAAAAGGTTTTGTAGTGTTCTACCATCGGTAAAAATGTGGTTCTGTCACGCGCGGATTA
AAAAGGGAAGGGAAGCTGAA

Downstream 100 bases:

>100_bases
CTATTGAGTTTTGGTCGTGATTATTCTAGTCAGCATATAGCTGATGATGCCGATAACCATTGCGGTAGCCGAGCATGCTA
TAAAATAGCGAGCTTCTGCT

Product: dethiobiotin synthetase

Products: NA

Alternate protein names: DTB synthetase; DTBS; Dethiobiotin synthase [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MGIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLCASPDIGTIEKLTGIRGEDFSQLDDPLVQVCHLSES
GKTVVVEGSGGLSVALIGKKTIADIAAELDAPLVVVSGMNRGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLT
LVEASRASGVPFIGSLNDGVGSLGCEPFAEALSTIFIPDEW

Sequences:

>Translated_201_residues
MGIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLCASPDIGTIEKLTGIRGEDFSQLDDPLVQVCHLSES
GKTVVVEGSGGLSVALIGKKTIADIAAELDAPLVVVSGMNRGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLT
LVEASRASGVPFIGSLNDGVGSLGCEPFAEALSTIFIPDEW
>Mature_200_residues
GIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLCASPDIGTIEKLTGIRGEDFSQLDDPLVQVCHLSESG
KTVVVEGSGGLSVALIGKKTIADIAAELDAPLVVVSGMNRGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLTL
VEASRASGVPFIGSLNDGVGSLGCEPFAEALSTIFIPDEW

Specific function: Unknown

COG id: COG0132

COG function: function code H; Dethiobiotin synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dethiobiotin synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004472
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =6.3.3.3 [H]

Molecular weight: Translated: 20260; Mature: 20128

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLCASPDIGTIEKLTGIR
CCEEEEECHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC
GEDFSQLDDPLVQVCHLSESGKTVVVEGSGGLSVALIGKKTIADIAAELDAPLVVVSGMN
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCEEEEECCC
RGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLTLVEASRASGVPFIGSLNDGV
CCEEEEEHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHEEEEEECCCCCCCCEEECCCCCC
GSLGCEPFAEALSTIFIPDEW
CCCCCHHHHHHHHEECCCCCC
>Mature Secondary Structure 
GIVVVSGLASGVGKTTATAAIVKILQAKGRDVVPAKIARLQNLCASPDIGTIEKLTGIR
CEEEEECHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC
GEDFSQLDDPLVQVCHLSESGKTVVVEGSGGLSVALIGKKTIADIAAELDAPLVVVSGMN
CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHCCCCEEEEECCC
RGAVELAVNAVGFARACGANVAGLLGGKLPAGADLRTRLTLVEASRASGVPFIGSLNDGV
CCEEEEEHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHEEEEEECCCCCCCCEEECCCCCC
GSLGCEPFAEALSTIFIPDEW
CCCCCHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910 [H]