Click here to switch to the map view.

The map label for this gene is 38233774

Identifier: 38233774

GI number: 38233774

Start: 1182927

End: 1183877

Strand: Direct

Name: 38233774

Synonym: DIP1184

Alternate gene names: NA

Gene position: 1182927-1183877 (Clockwise)

Preceding gene: 38233773

Following gene: 38233775

Centisome position: 47.53

GC content: 46.06

Gene sequence:

>951_bases
ATGGCTAGAAAATCTGGACGCACTGCAACTGCTATTGCAGGTCTTTCCTTCGGCCTTGCATTAGGCATCGGGGCTGGGAT
GTACGTGTTGGCTCCAAATGTTGCTGGTGGCCCAAATCAAACAACTTCCACTTTGGAACGTGAACGTGACGATGCTCTTG
AGTCTGCCCAGATTGCAAAGGCGCAAGCTAAAAGTGCCGATAGTGTAGTGTCGGCACTTGGGAGGGGAATTACTACTGAT
CTCCTGAAAGAAAAGAAGGTATTAGTGTTCCGCACCTCAGATTCGCTTGATAGCGATGCGGATGCCTTGTCTGAAGCGTT
AAAAAGTGCAGGAGCGGAAAATGCTGGAACTATTAAATTGGGCGAGAAATTTTTCACTCAAGAAGGCGCTGATGGCTTAA
AAAATATTATTGCTACTACGCTTCCAGCTGGTGCTCAGCTTTCTACTGAGAAAATGGATTCTGGTACTCATGCCGGAGAT
GCGTTGGGCAGTGCACTCTTGTTGAACAAAGATGATGGTTCTGAGCAAGCAAATAAAGAAGATCGTGGGATTGTGCTAGG
TGCACTGCGAGAAAGCGGCTATATCGATTTTGATGAGGCGAGCGTAAAACCGGCACATGCGATAGTTTTACTTTCAGGAG
ATTCTGACGGGTCAAAAGCAGCTTTTTCTATTAAAAATCAAGTCTCATTTGCCACCGCTTTGAAATCCAAAGGCTCTGGT
CTGCTTGTTGCAGGTCGAATTCATACTGCAAGTGACGCTGGTCTTTTGGGAACAATTCGGACCTCGGCACAAGATAAACA
AGCTGTTTCTACCATTGATTCAATTGACCAGAATTGGGCACAAATTGCCGCAATTTTAGCGCTTAAGGAACAAATCGACG
GTAAATCTGGTGCTTATGGCGCAGCGGGGAATGTCGACGCTACATCTCCAGGAATTAAAAATCCTGAGTAG

Upstream 100 bases:

>100_bases
CGATGGTTCTTTTAGCCAGAATCTCATTGACACATGGAATAACTTTGCTTTGACAGTGCAAAGTTGGTTTAAATAAAACC
CTCGAAGGAAGAACAAAAAT

Downstream 100 bases:

>100_bases
ATTGCAGCTATCGTTGAGATTATGACTCCTCATTCGTTTGTCGTGACAGATAGTACGTTGCTTTTGGATGCTCCAATTAT
TGCGGTGCGACGAGACAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTLERERDDALESAQIAKAQAKSADSVVSALGRGITTD
LLKEKKVLVFRTSDSLDSDADALSEALKSAGAENAGTIKLGEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGD
ALGSALLLNKDDGSEQANKEDRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAFSIKNQVSFATALKSKGSG
LLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQIAAILALKEQIDGKSGAYGAAGNVDATSPGIKNPE

Sequences:

>Translated_316_residues
MARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTLERERDDALESAQIAKAQAKSADSVVSALGRGITTD
LLKEKKVLVFRTSDSLDSDADALSEALKSAGAENAGTIKLGEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGD
ALGSALLLNKDDGSEQANKEDRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAFSIKNQVSFATALKSKGSG
LLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQIAAILALKEQIDGKSGAYGAAGNVDATSPGIKNPE
>Mature_315_residues
ARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTLERERDDALESAQIAKAQAKSADSVVSALGRGITTDL
LKEKKVLVFRTSDSLDSDADALSEALKSAGAENAGTIKLGEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGDA
LGSALLLNKDDGSEQANKEDRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAFSIKNQVSFATALKSKGSGL
LVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQIAAILALKEQIDGKSGAYGAAGNVDATSPGIKNPE

Specific function: Likely involved in transport processes across the outer membrane. Appears to be specific for mycolic acid-containing membranes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021522 [H]

Pfam domain/function: PF11382 DUF3186 [H]

EC number: NA

Molecular weight: Translated: 32203; Mature: 32072

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTLERERDDALESAQIAK
CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQAKSADSVVSALGRGITTDLLKEKKVLVFRTSDSLDSDADALSEALKSAGAENAGTIKL
HHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEE
GEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGDALGSALLLNKDDGSEQANKE
CHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHCCEEEEECCCCCHHCCCC
DRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAFSIKNQVSFATALKSKGSG
CCCEEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCC
LLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQIAAILALKEQIDGKSGAYG
EEEEEEEECCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAGNVDATSPGIKNPE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARKSGRTATAIAGLSFGLALGIGAGMYVLAPNVAGGPNQTTSTLERERDDALESAQIAK
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AQAKSADSVVSALGRGITTDLLKEKKVLVFRTSDSLDSDADALSEALKSAGAENAGTIKL
HHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEE
GEKFFTQEGADGLKNIIATTLPAGAQLSTEKMDSGTHAGDALGSALLLNKDDGSEQANKE
CHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHCCEEEEECCCCCHHCCCC
DRGIVLGALRESGYIDFDEASVKPAHAIVLLSGDSDGSKAAFSIKNQVSFATALKSKGSG
CCCEEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCCC
LLVAGRIHTASDAGLLGTIRTSAQDKQAVSTIDSIDQNWAQIAAILALKEQIDGKSGAYG
EEEEEEEECCCCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAGNVDATSPGIKNPE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]