| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233697
Identifier: 38233697
GI number: 38233697
Start: 1088634
End: 1090115
Strand: Direct
Name: 38233697
Synonym: DIP1103
Alternate gene names: NA
Gene position: 1088634-1090115 (Clockwise)
Preceding gene: 38233696
Following gene: 38233698
Centisome position: 43.74
GC content: 51.82
Gene sequence:
>1482_bases ATGGGAACAAGCGGATGCACCGTGGATACCTCGCGCCGGGATAAAGTGCGAATGGCTTTGCCTCACGCCGAGCTCGAACA AGCGCGAATGGATAACCTTACGCGTCACGTGGCACAGAATTTTTTGAGAGAGCCACAGGTGGTGGGTGAACCCAATGATT CAGGCGTCGCGGTTTCGCAGTTGTTGTTCGAAAAGTCAGATACGGTCGTGATTTCAGACCGTGAGATTCACCACCAGCTG CGGGCGGCGTCGATAGCTGTGGTCGCTCATGCGCCAATGCTTCTTATGGACGATACTGATCGTGATGCGGTTCAAGCAGA AATCGGTCGGCTGGGTGCTCGCTATATTTTGGCCATTGGTGATGTGGGCCTGCCAAAGACCACAGGAAACGTCAAAGTCA TTCCAGATTCTGGTTCTTTGACAGCTTTGGGAAAGCTCACGTCTTTGCAGTTTCGCACCCAGCGTATCGACGTCTCCAAT GCGCTTTCCGCTGTCTCTCGGTTGGATGGGACGCACCCCATGTGGTTGCTGACTAATCGGCAAGAAAAAGTGCAGTCGAG TCCAAGTGATGGGGAAGTATCAGCTTTTCCAGTGCAGTCGAGGCGCGATGCTGGTGCAGCTCCGCAAGTGATCGCTACTC AGGAATCTGGCATTGCGGCAGTTGCTACTGCGCGTTCTTATGGTGCATCGGTGACCGTCATGCGTTTTCCGGATCCGCGG CTTAATGTGGAATCAATGCGGGCGGTTGCTGGGCTTTCCGATCAGCCGCTCATTGCTTTGGGCTCACAGTTTGGAACGTC ACAGCAGCTCAGTGAAAGAATCGAGTTGGGTGAACGTGCGCCGTTAGCACTTCCGCACAAGACCGGTCTTGTTTTTGCTC TGCGTACCCTAAGAGCGCGATACCTTAATGATTCCGATGTATCTGAGCACGTGGACATTCCTTATGGGGCGAATTATGTG CGTACCATTGCGCATCCGTTGTCCTCGCAAGATCAACAGGACTGGAAAGCATGGGCCGATGCAATCAACGCGCAAGATGG ATTTGTCTTTATCGAAATAGATGCGGTTCATCGCGATGCTGATGAGATTCTTGATTCGGTCGAGGAAATCGTTTCTCAGC CATCAATTGGGGTGATTTTGAGGAATGCAGCTCAGGTTTGTGCACGATCTCCTCAATCACGCCAAAGGATTGCAGATCGC CTCATGCATTGGAATAGCGAAGTTATTAATCACAATGGCGATCAGCTAGGCGTGGTTCTTGAAGGGGTAGACATCCTCCG AGGCGGTGTATGTGGAATTTCTCCCCAAGAGCTTATGGGTTTGGGATTGGCAATTTTGCCTGCTCGTGGAGAACATTTAG GCGGAGACGCGACCGTGAACAGTCAGTTATATTGGGATGATTGGTTCGTCGCCGAACGTGAATCATTCCAACCCACTGGC ACATTAAGATCCCCCCGACTTGGGTTAATAATTCGCGACTAA
Upstream 100 bases:
>100_bases GATCTCACCGCCGGCGAGGAAGGTCCACTGGCCTTTGAGAAGTAAGGCATCACGGACCTGGATAGCCACACTTGCCGTTA TTACAAGTGTGGCTATTGCC
Downstream 100 bases:
>100_bases CTGCATTATTTGCCCTAATTCTGTCATGCACTAGGTGAGTTTCCGCAGTCTCGTTTACACTGTGTTGCAGTCGCGCGCCA GTGAGCAGGCGCGGACCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MGTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREPQVVGEPNDSGVAVSQLLFEKSDTVVISDREIHHQL RAASIAVVAHAPMLLMDDTDRDAVQAEIGRLGARYILAIGDVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSN ALSAVSRLDGTHPMWLLTNRQEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVATARSYGASVTVMRFPDPR LNVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAPLALPHKTGLVFALRTLRARYLNDSDVSEHVDIPYGANYV RTIAHPLSSQDQQDWKAWADAINAQDGFVFIEIDAVHRDADEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIADR LMHWNSEVINHNGDQLGVVLEGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDATVNSQLYWDDWFVAERESFQPTG TLRSPRLGLIIRD
Sequences:
>Translated_493_residues MGTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREPQVVGEPNDSGVAVSQLLFEKSDTVVISDREIHHQL RAASIAVVAHAPMLLMDDTDRDAVQAEIGRLGARYILAIGDVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSN ALSAVSRLDGTHPMWLLTNRQEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVATARSYGASVTVMRFPDPR LNVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAPLALPHKTGLVFALRTLRARYLNDSDVSEHVDIPYGANYV RTIAHPLSSQDQQDWKAWADAINAQDGFVFIEIDAVHRDADEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIADR LMHWNSEVINHNGDQLGVVLEGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDATVNSQLYWDDWFVAERESFQPTG TLRSPRLGLIIRD >Mature_492_residues GTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREPQVVGEPNDSGVAVSQLLFEKSDTVVISDREIHHQLR AASIAVVAHAPMLLMDDTDRDAVQAEIGRLGARYILAIGDVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSNA LSAVSRLDGTHPMWLLTNRQEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVATARSYGASVTVMRFPDPRL NVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAPLALPHKTGLVFALRTLRARYLNDSDVSEHVDIPYGANYVR TIAHPLSSQDQQDWKAWADAINAQDGFVFIEIDAVHRDADEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIADRL MHWNSEVINHNGDQLGVVLEGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDATVNSQLYWDDWFVAERESFQPTGT LRSPRLGLIIRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53623; Mature: 53492
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREPQVVGEPNDSGVAVSQ CCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH LLFEKSDTVVISDREIHHQLRAASIAVVAHAPMLLMDDTDRDAVQAEIGRLGARYILAIG HHHCCCCEEEEECHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHHHHHCCCEEEEEEC DVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSNALSAVSRLDGTHPMWLLTNR CCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECC QEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVATARSYGASVTVMRFPDPR HHHHHCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEHHHCCCEEEEEECCCCC LNVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAPLALPHKTGLVFALRTLRAR CCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YLNDSDVSEHVDIPYGANYVRTIAHPLSSQDQQDWKAWADAINAQDGFVFIEIDAVHRDA HCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCCH DEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIADRLMHWNSEVINHNGDQLGVVL HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEEE EGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDATVNSQLYWDDWFVAERESFQPTG ECHHHHCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCEECCEEEECCEEEECCCCCCCCC TLRSPRLGLIIRD CCCCCCEEEEEEC >Mature Secondary Structure GTSGCTVDTSRRDKVRMALPHAELEQARMDNLTRHVAQNFLREPQVVGEPNDSGVAVSQ CCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH LLFEKSDTVVISDREIHHQLRAASIAVVAHAPMLLMDDTDRDAVQAEIGRLGARYILAIG HHHCCCCEEEEECHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHHHHHCCCEEEEEEC DVGLPKTTGNVKVIPDSGSLTALGKLTSLQFRTQRIDVSNALSAVSRLDGTHPMWLLTNR CCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECC QEKVQSSPSDGEVSAFPVQSRRDAGAAPQVIATQESGIAAVATARSYGASVTVMRFPDPR HHHHHCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCEEEEEEHHHCCCEEEEEECCCCC LNVESMRAVAGLSDQPLIALGSQFGTSQQLSERIELGERAPLALPHKTGLVFALRTLRAR CCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH YLNDSDVSEHVDIPYGANYVRTIAHPLSSQDQQDWKAWADAINAQDGFVFIEIDAVHRDA HCCCCCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHCCH DEILDSVEEIVSQPSIGVILRNAAQVCARSPQSRQRIADRLMHWNSEVINHNGDQLGVVL HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEEE EGVDILRGGVCGISPQELMGLGLAILPARGEHLGGDATVNSQLYWDDWFVAERESFQPTG ECHHHHCCCCCCCCHHHHHHCCEEEECCCCCCCCCCCEECCEEEECCEEEECCCCCCCCC TLRSPRLGLIIRD CCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA