| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is yghZ [H]
Identifier: 38233684
GI number: 38233684
Start: 1073046
End: 1074143
Strand: Direct
Name: yghZ [H]
Synonym: DIP1090
Alternate gene names: 38233684
Gene position: 1073046-1074143 (Clockwise)
Preceding gene: 38233683
Following gene: 38233686
Centisome position: 43.12
GC content: 50.82
Gene sequence:
>1098_bases ATGACTTACTCACGGCAAGCAGCGCAGGTATATACTCCTGCGGTTCAACGGTACGAGGATATGGAATACCGGCAGTGTGG TCACTCGGGCCTTCGACTGCCAGCAATTAGCCTAGGTTTCTGGCATAACTTTGGTGACGATAAGCCGCTAGCTAATCAGC GCGCCATTGTTCGTCGCGCGTTCGACCGAGGCATTACACATTTTGATCTGGCAAATAACTACGGGCCTCCAGAAGGTTCG GCAGAGATCAATTTTGGAAGAATCTTCCGAGAAGATTTGGCCCGCCACCGGGATGAAATCGTCATTTCTACCAAGGCGGG GTGGAACATGGGAGCAGGTCCATACAGTTTTGGTGGTAGCCGCAAGTACTTGATGGATTCACTGGATTCTTCACTTGATC GCCTAGGGCTTGATCACGTGGATATTTTCTATCATCATCGTCCAGATCCAGATACGCCTTTGGAAGAAACTGCATATGCT TTGCGAGACATCGTGGCATCCGGCAAGGCTCGCTATGTGGGAATTTCCTCCTATGGACCTGAACTAACCGCAGAGATCTC GGAAATTCTAGCTGGTGAGGGCTGCCCGCTGCTGATTCATCAACCGAGCTATTCTATCTTGAACCGCTGGGTAGAAGAAC CAGGTGAAGATGGCGAGAACCTGTTAGAGTCTGCGGCGAATAACGGACTGGGTGTTATTGCATTTTCGCCACTTGCACAG GGGCTTTTAACTGACAGGTATCTCGAGGGCGTGCCAGTGGATTCACGGGCAGCAGCAGGGAAGTCCTTGGGCAAAGAGAT GCTCAACGCTAAAAATCTTGACATGGTGCGTGCACTGAATGATTTAGCGTTACGACGTGGCCAAACGTTGGCACAGCTGG CTATTGCGTGGGTGCTGCGGGAACAAGGCGATTATGGGGCCACAACGGTAACCAGTGCGTTGATCGGAGCATCGTCGGTA GCGCAGTTGGATCAAAATCTGGGAGCTCTTAATAATCTTGAGTTCAGCGTTGAGGAACGCAATTATATTGACACTGTTGC CAAGGACGCTGGAATTAATATTTGGGCGGGTGCTACTGCCTCGAAGGTTCACGATTAA
Upstream 100 bases:
>100_bases GCAATTAGGTTGCCCCCTTTGATCGTGTGTATTCGCGCGTTTGAAGGGGGATATTTTTATCTCTTGCCGCGGTGAGAAGT TGCGCGCACAATAGGGGAGT
Downstream 100 bases:
>100_bases AGGCGGGGTACCTTAAAGAGCAATGAGCCTAGTGCATGATGAGACGTGCGCACATGATCATCATGATGATTCCGATTGCT ATGTTGATATATCGCCACAC
Product: putative aldo/keto-reductase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFGDDKPLANQRAIVRRAFDRGITHFDLANNYGPPEGS AEINFGRIFREDLARHRDEIVISTKAGWNMGAGPYSFGGSRKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYA LRDIVASGKARYVGISSYGPELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLLESAANNGLGVIAFSPLAQ GLLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALNDLALRRGQTLAQLAIAWVLREQGDYGATTVTSALIGASSV AQLDQNLGALNNLEFSVEERNYIDTVAKDAGINIWAGATASKVHD
Sequences:
>Translated_365_residues MTYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFGDDKPLANQRAIVRRAFDRGITHFDLANNYGPPEGS AEINFGRIFREDLARHRDEIVISTKAGWNMGAGPYSFGGSRKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYA LRDIVASGKARYVGISSYGPELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLLESAANNGLGVIAFSPLAQ GLLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALNDLALRRGQTLAQLAIAWVLREQGDYGATTVTSALIGASSV AQLDQNLGALNNLEFSVEERNYIDTVAKDAGINIWAGATASKVHD >Mature_364_residues TYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFGDDKPLANQRAIVRRAFDRGITHFDLANNYGPPEGSA EINFGRIFREDLARHRDEIVISTKAGWNMGAGPYSFGGSRKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYAL RDIVASGKARYVGISSYGPELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLLESAANNGLGVIAFSPLAQG LLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALNDLALRRGQTLAQLAIAWVLREQGDYGATTVTSALIGASSVA QLDQNLGALNNLEFSVEERNYIDTVAKDAGINIWAGATASKVHD
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=323, Percent_Identity=35.6037151702786, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=35.5140186915888, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI27436964, Length=337, Percent_Identity=33.2344213649852, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI27436962, Length=337, Percent_Identity=33.2344213649852, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI27436966, Length=337, Percent_Identity=32.9376854599407, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI27436971, Length=326, Percent_Identity=34.6625766871166, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI223718702, Length=302, Percent_Identity=30.1324503311258, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI41152114, Length=294, Percent_Identity=31.2925170068027, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI41327764, Length=219, Percent_Identity=30.1369863013699, Blast_Score=76, Evalue=4e-14, Organism=Escherichia coli, GI1789375, Length=354, Percent_Identity=56.2146892655367, Blast_Score=396, Evalue=1e-111, Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=35, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1788070, Length=325, Percent_Identity=30.1538461538462, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=27.9538904899135, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1788081, Length=325, Percent_Identity=25.2307692307692, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI48994888, Length=148, Percent_Identity=29.7297297297297, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=349, Percent_Identity=26.0744985673352, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322615, Length=264, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319958, Length=299, Percent_Identity=24.7491638795987, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322556, Length=319, Percent_Identity=25.3918495297806, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6323998, Length=338, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24640980, Length=336, Percent_Identity=26.4880952380952, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI45549126, Length=336, Percent_Identity=26.4880952380952, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646155, Length=232, Percent_Identity=30.1724137931034, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646159, Length=272, Percent_Identity=26.8382352941176, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 39957; Mature: 39826
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFGDDKPLANQRAIVRRA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHH FDRGITHFDLANNYGPPEGSAEINFGRIFREDLARHRDEIVISTKAGWNMGAGPYSFGGS HHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC RKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYALRDIVASGKARYVGISSYGP HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC ELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLLESAANNGLGVIAFSPLAQ HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHH GLLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALNDLALRRGQTLAQLAIAWVLR HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH EQGDYGATTVTSALIGASSVAQLDQNLGALNNLEFSVEERNYIDTVAKDAGINIWAGATA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCEEEECCCH SKVHD HCCCC >Mature Secondary Structure TYSRQAAQVYTPAVQRYEDMEYRQCGHSGLRLPAISLGFWHNFGDDKPLANQRAIVRRA CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHH FDRGITHFDLANNYGPPEGSAEINFGRIFREDLARHRDEIVISTKAGWNMGAGPYSFGGS HHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC RKYLMDSLDSSLDRLGLDHVDIFYHHRPDPDTPLEETAYALRDIVASGKARYVGISSYGP HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC ELTAEISEILAGEGCPLLIHQPSYSILNRWVEEPGEDGENLLESAANNGLGVIAFSPLAQ HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHH GLLTDRYLEGVPVDSRAAAGKSLGKEMLNAKNLDMVRALNDLALRRGQTLAQLAIAWVLR HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH EQGDYGATTVTSALIGASSVAQLDQNLGALNNLEFSVEERNYIDTVAKDAGINIWAGATA HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCEEEECCCH SKVHD HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]