| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233663
Identifier: 38233663
GI number: 38233663
Start: 1049947
End: 1051131
Strand: Direct
Name: 38233663
Synonym: DIP1069
Alternate gene names: NA
Gene position: 1049947-1051131 (Clockwise)
Preceding gene: 38233662
Following gene: 38233664
Centisome position: 42.19
GC content: 53.16
Gene sequence:
>1185_bases GTGAGTTACACCACCGACGAGGTGCATTTCCTCCTCGACCTTGATGCAGAAATAACAGCTGTAGCAGGCGCGATCACTCG CGACCATGCGATGACCAAAGCGACAGCAGTAAAAGACGCCGCAACGTTTCACAAACATTTCGGCGCCAATGGTCGAGCAG CAATGGAACTATGCGCCTCTCGAACATCAGCGCAGGGAAAACTCCCGCACGACTGGCTGATGTGCCACGATTCTTCACAA CAAGCAACTCCACTAACTGTGGCTCAGCAGCGAGCGCACCGCATCCACCGTGTCTGTGGATCCGAAGCAATAGTCCACGA CGTAACATGCTCCATCGGTACAGAGGGAGCAGCAATTACTGATCTCGGTATGGCGTACCACGGCAGTGACCTTGATATGT CACGCCTCCTTATGGCACGACATAATGTGCCTACTGGTCTATTTTTTCAAGCAGACGCACTAAAACGAGCGTCGACAAGC AGCGACGTCATCATCGCAGACCCCGCTCGGCGTGCAGAAGGACGCAGAATCACCAAGCCCGACCAACTCATTCCACCGCT GCCACAATTGGTTGACCATTGGCGCATAGCTACAACCACAGCCGCACCGATGGCAATCAAATGCGCGCCGGGCTTGGATT TTCAAGAATGGGACGGGCTGGTCAGCGTTGTAAGCGTTGCTGGTGGCGTAAAAGAAGCGTGCCTCTACACACCAGAGTTA TCGGAAGGATTGACTCGGGAAGCCATCATGATTGGACCAGATCAAAGTGTCGACGTCCTCAACGACCGCCACGGTGGTGA AGTACCCGCTGGGGATCCAGGGACTTTTATCATCGACCCCGATGGTGCAGTTGTACGTGCGGGACTGGTCCAACACTATG CCGCGCGTGAACAATTATGGATGCTTGATGAGCACATTGCTTATCTCACTGGTGATCGCATTCCACAGGGGAGAAGCGGC TTTAGATTCATTGAGATGGTGGGGCTTAAACAGCTGAAATCGGCTTTGGTTGCTCACGATGCCGGAAGCCTAGAAATCCT AGTACGAGGCGTGGATGTGGATCCGGATCAATTGCGAAAGAAACTCAAGCTCAAGGGCAATACTCCTATGGCAGTGATAT GTACCCGCATTGGTCGAAAAGGTGTAGCTTTGATCTGCCATGCGCGCGAACATTCACAGACATAG
Upstream 100 bases:
>100_bases TAGACGATCCGCGCTTTGAAGAATTCTATAGTTTTACCCCTCCCGAACGCTTCTAAAACAACGCTTTTAAAAAAAACACT GAAAACGAGAACACCAACCA
Downstream 100 bases:
>100_bases GAAGAAAATGCCAGATGCATGCTCACGATAAGCACAAGTTTGTGCGCTGCATTAGACTAGTCGGGCGCGTGGCCCACAAG GGTCCAAGCGCACTATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHKHFGANGRAAMELCASRTSAQGKLPHDWLMCHDSSQ QATPLTVAQQRAHRIHRVCGSEAIVHDVTCSIGTEGAAITDLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTS SDVIIADPARRAEGRRITKPDQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVSVVSVAGGVKEACLYTPEL SEGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPDGAVVRAGLVQHYAAREQLWMLDEHIAYLTGDRIPQGRSG FRFIEMVGLKQLKSALVAHDAGSLEILVRGVDVDPDQLRKKLKLKGNTPMAVICTRIGRKGVALICHAREHSQT
Sequences:
>Translated_394_residues MSYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHKHFGANGRAAMELCASRTSAQGKLPHDWLMCHDSSQ QATPLTVAQQRAHRIHRVCGSEAIVHDVTCSIGTEGAAITDLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTS SDVIIADPARRAEGRRITKPDQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVSVVSVAGGVKEACLYTPEL SEGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPDGAVVRAGLVQHYAAREQLWMLDEHIAYLTGDRIPQGRSG FRFIEMVGLKQLKSALVAHDAGSLEILVRGVDVDPDQLRKKLKLKGNTPMAVICTRIGRKGVALICHAREHSQT >Mature_393_residues SYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHKHFGANGRAAMELCASRTSAQGKLPHDWLMCHDSSQQ ATPLTVAQQRAHRIHRVCGSEAIVHDVTCSIGTEGAAITDLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTSS DVIIADPARRAEGRRITKPDQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVSVVSVAGGVKEACLYTPELS EGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPDGAVVRAGLVQHYAAREQLWMLDEHIAYLTGDRIPQGRSGF RFIEMVGLKQLKSALVAHDAGSLEILVRGVDVDPDQLRKKLKLKGNTPMAVICTRIGRKGVALICHAREHSQT
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42604; Mature: 42473
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHKHFGANGRAAMELCAS CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RTSAQGKLPHDWLMCHDSSQQATPLTVAQQRAHRIHRVCGSEAIVHDVTCSIGTEGAAIT HCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEE DLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTSSDVIIADPARRAEGRRITKP CCCCEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCEEEECCHHHCCCCCCCCC DQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVSVVSVAGGVKEACLYTPEL CCCCCCHHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHEECCHH SEGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPDGAVVRAGLVQHYAAREQLW HCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH MLDEHIAYLTGDRIPQGRSGFRFIEMVGLKQLKSALVAHDAGSLEILVRGVDVDPDQLRK HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH KLKLKGNTPMAVICTRIGRKGVALICHAREHSQT HHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure SYTTDEVHFLLDLDAEITAVAGAITRDHAMTKATAVKDAATFHKHFGANGRAAMELCAS CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RTSAQGKLPHDWLMCHDSSQQATPLTVAQQRAHRIHRVCGSEAIVHDVTCSIGTEGAAIT HCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEE DLGMAYHGSDLDMSRLLMARHNVPTGLFFQADALKRASTSSDVIIADPARRAEGRRITKP CCCCEECCCCCCHHHHHHHHCCCCCCEEEEHHHHHHCCCCCCEEEECCHHHCCCCCCCCC DQLIPPLPQLVDHWRIATTTAAPMAIKCAPGLDFQEWDGLVSVVSVAGGVKEACLYTPEL CCCCCCHHHHHHHHEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHEECCHH SEGLTREAIMIGPDQSVDVLNDRHGGEVPAGDPGTFIIDPDGAVVRAGLVQHYAAREQLW HCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH MLDEHIAYLTGDRIPQGRSGFRFIEMVGLKQLKSALVAHDAGSLEILVRGVDVDPDQLRK HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH KLKLKGNTPMAVICTRIGRKGVALICHAREHSQT HHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA