| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233662
Identifier: 38233662
GI number: 38233662
Start: 1049093
End: 1049902
Strand: Direct
Name: 38233662
Synonym: DIP1068
Alternate gene names: NA
Gene position: 1049093-1049902 (Clockwise)
Preceding gene: 38233661
Following gene: 38233663
Centisome position: 42.16
GC content: 53.7
Gene sequence:
>810_bases ATGAGTACACCAGTGGACCTCACTGAAGGGCTCGACGGTGCAAAACTAGCCGTTACTGTGCTCATGATCCGAGATTCCCC CACTGGACTCGAAGTCTATGTTCAAGAACGAGTCTCATCGATGCCGACGTTTCCCAATGCCACCGTATTCCCAGGCGGTG GAGTAGACCCCCGTGACTTCGAACTCGATGGTGTCGAATCAGAACACGAAACCTTTGGTGGGCCAAGCCTCATGCACTGG GCTCGCTCACTCGGCACAAACCGTAACCGAGCACGCGCACTATTATTCGCAGCAGCACGCGAACTCTTTGAAGAAACCGG CACCCTGCTAGCCACACACTCAGACGGCACTCCCATTCCTGATGCCACGCAATATCACCCTCAACGGTTGGCGTTGGAAA GTCACAGACTATCGCTTTCTCAAGTCTTGGCACGACATGATCTCACGTTACGCTCTGAATGGCTACGCCCCTCCACCCGA TGGGTAAGCCCCGAAACAGACGAAAAACGATTCGATATGTTTGCTTTCGTCGCAGTACAACCCCCCGGACAAGAACCCGA CGGAAATACCCGCGAAGCAGCATCAACCGGTTGGTTTTCCCCATCACTCATCCTCGACGGATGGCGGGCAGGACTCATAC GACTCGTAATCCCAACATGGGCACAACTACTGATCCTCAGTCGATTCGATTGTGTGCGCGACGTACTAGAATTTCTTCGC CGCGCAGACATGACACCCATCATTGGCGATCCCGTAGACGATCCGCGCTTTGAAGAATTCTATAGTTTTACCCCTCCCGA ACGCTTCTAA
Upstream 100 bases:
>100_bases TGCCCGTAGTCACCGTCGCTAGCGGACTCTCGACAAATCAAACACGCTGTAGAATATCTTGCGACTACGCCGGACTTGGG AATCGAGGTGAGCAACCCCC
Downstream 100 bases:
>100_bases AACAACGCTTTTAAAAAAAACACTGAAAACGAGAACACCAACCAGTGAGTTACACCACCGACGAGGTGCATTTCCTCCTC GACCTTGATGCAGAAATAAC
Product: NUDIX/MutT family hydrolase
Products: NA
Alternate protein names: NUDIX Family Protein; NUDIX Family Hydrolase; Beta-Lactamase-Like; NUDIX Domain-Containing Protein; NUDIX Protein; Beta-Lactamase Domain-Containing Protein; NUDIX/MutT Family Hydrolase; Nudix Hydrolase; Hydrolase; Nudix Superfamily Hydrolase
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSTPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFPNATVFPGGGVDPRDFELDGVESEHETFGGPSLMHW ARSLGTNRNRARALLFAAARELFEETGTLLATHSDGTPIPDATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTR WVSPETDEKRFDMFAFVAVQPPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQLLILSRFDCVRDVLEFLR RADMTPIIGDPVDDPRFEEFYSFTPPERF
Sequences:
>Translated_269_residues MSTPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFPNATVFPGGGVDPRDFELDGVESEHETFGGPSLMHW ARSLGTNRNRARALLFAAARELFEETGTLLATHSDGTPIPDATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTR WVSPETDEKRFDMFAFVAVQPPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQLLILSRFDCVRDVLEFLR RADMTPIIGDPVDDPRFEEFYSFTPPERF >Mature_268_residues STPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFPNATVFPGGGVDPRDFELDGVESEHETFGGPSLMHWA RSLGTNRNRARALLFAAARELFEETGTLLATHSDGTPIPDATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTRW VSPETDEKRFDMFAFVAVQPPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQLLILSRFDCVRDVLEFLRR ADMTPIIGDPVDDPRFEEFYSFTPPERF
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30168; Mature: 30037
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFPNATVFPGGGVDPRDF CCCCCCHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC ELDGVESEHETFGGPSLMHWARSLGTNRNRARALLFAAARELFEETGTLLATHSDGTPIP CCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC DATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTRWVSPETDEKRFDMFAFVAVQ CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHEEEEEEEEEC PPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQLLILSRFDCVRDVLEFLR CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADMTPIIGDPVDDPRFEEFYSFTPPERF HCCCCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure STPVDLTEGLDGAKLAVTVLMIRDSPTGLEVYVQERVSSMPTFPNATVFPGGGVDPRDF CCCCCHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC ELDGVESEHETFGGPSLMHWARSLGTNRNRARALLFAAARELFEETGTLLATHSDGTPIP CCCCCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC DATQYHPQRLALESHRLSLSQVLARHDLTLRSEWLRPSTRWVSPETDEKRFDMFAFVAVQ CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHEEEEEEEEEC PPGQEPDGNTREAASTGWFSPSLILDGWRAGLIRLVIPTWAQLLILSRFDCVRDVLEFLR CCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADMTPIIGDPVDDPRFEEFYSFTPPERF HCCCCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA