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The map label for this gene is 38233649

Identifier: 38233649

GI number: 38233649

Start: 1036006

End: 1036695

Strand: Direct

Name: 38233649

Synonym: DIP1055

Alternate gene names: NA

Gene position: 1036006-1036695 (Clockwise)

Preceding gene: 38233648

Following gene: 38233650

Centisome position: 41.63

GC content: 49.86

Gene sequence:

>690_bases
ATGCGTCTTGTCATTGCTCGTTGTTCTGTCGATTATATTGGTCGCCTCGAAGCTCACCTTCCGATGGCCGATCGTCTACT
CATGGTCAAAGCTGATGGATCTGTTTCTATTCATGCTGATGACCGTGCATACAAGCCTCTGAACTGGATGACACCTCCGT
GTACGTTAACGGAAACGACGCATGAGGAATCGGAGACTGGTGAATCGATTCCGCTATGGATCGTTGAAAATAAAAAAGGT
GAGCAGCTGCGTATCACGATTGAAGCACTGCACTCCGATATGTATTACGACTTGGGTGAAGACCCAGGGCTACAAAAAGA
CGGCGTTGAGGCACATCTCCAAGAGCTTCTAGCTGAGCATATTGAAACGCTTGGCGACGGCTACTCGTTAGTGCGTAGGG
AATACCCCACACCAATTGGCCCCGTCGATATTCTGTGCCGTGATGATAAAGGTGGCTCCGTCGCCGTCGAAATTAAGCGC
CGTGGTGGCATTGATGGCGTTGAGCAATTAAGTCGTTACCTTGAGCTGCTTAACCGTGATGATTTACTCGCACCAGTGGC
AGGTGTATTTGCAGCCCAGCACATTAAACCGCAGGCTCGGACTTTGGCCGAAGACCGTGGAATTCGATGCGTCACACTTG
ATTATGATTCTCTGCGAGGCATTGAATCGACAGAACTGCGACTGTTCTAG

Upstream 100 bases:

>100_bases
CGCTCCTAGTCGACGTCAAGAACGGATCGACTACAACGCCTTGTATCGCAAAGTCGACCGGAATAAGCGTAAATAGCCCT
AACACGATAGGGTATTGAGC

Downstream 100 bases:

>100_bases
TTAGTTTTGTGTGAGAGGTTGATCTAACGTGGGGCGAAGAAATAGAAGAGCAGTGCCGGAATTACGCGCTTTACCGCGAG
ATGGCGCAACTTACTACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRLVIARCSVDYIGRLEAHLPMADRLLMVKADGSVSIHADDRAYKPLNWMTPPCTLTETTHEESETGESIPLWIVENKKG
EQLRITIEALHSDMYYDLGEDPGLQKDGVEAHLQELLAEHIETLGDGYSLVRREYPTPIGPVDILCRDDKGGSVAVEIKR
RGGIDGVEQLSRYLELLNRDDLLAPVAGVFAAQHIKPQARTLAEDRGIRCVTLDYDSLRGIESTELRLF

Sequences:

>Translated_229_residues
MRLVIARCSVDYIGRLEAHLPMADRLLMVKADGSVSIHADDRAYKPLNWMTPPCTLTETTHEESETGESIPLWIVENKKG
EQLRITIEALHSDMYYDLGEDPGLQKDGVEAHLQELLAEHIETLGDGYSLVRREYPTPIGPVDILCRDDKGGSVAVEIKR
RGGIDGVEQLSRYLELLNRDDLLAPVAGVFAAQHIKPQARTLAEDRGIRCVTLDYDSLRGIESTELRLF
>Mature_229_residues
MRLVIARCSVDYIGRLEAHLPMADRLLMVKADGSVSIHADDRAYKPLNWMTPPCTLTETTHEESETGESIPLWIVENKKG
EQLRITIEALHSDMYYDLGEDPGLQKDGVEAHLQELLAEHIETLGDGYSLVRREYPTPIGPVDILCRDDKGGSVAVEIKR
RGGIDGVEQLSRYLELLNRDDLLAPVAGVFAAQHIKPQARTLAEDRGIRCVTLDYDSLRGIESTELRLF

Specific function: Unknown

COG id: COG1637

COG function: function code L; Predicted nuclease of the RecB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0286 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1055_CORDI (Q6NHS6)

Other databases:

- EMBL:   BX248356
- RefSeq:   NP_939416.1
- GeneID:   2650821
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1055
- NMPDR:   fig|257309.1.peg.1007
- HOGENOM:   HBG322466
- OMA:   VDYVGRL
- ProtClustDB:   PRK03298
- BioCyc:   CDIP257309:DIP1055-MONOMER
- HAMAP:   MF_00722
- InterPro:   IPR002793

Pfam domain/function: PF01939 DUF91

EC number: NA

Molecular weight: Translated: 25636; Mature: 25636

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVIARCSVDYIGRLEAHLPMADRLLMVKADGSVSIHADDRAYKPLNWMTPPCTLTETT
CEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCC
HEESETGESIPLWIVENKKGEQLRITIEALHSDMYYDLGEDPGLQKDGVEAHLQELLAEH
CCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCHHHEECCCCCCCCCCCHHHHHHHHHHHH
IETLGDGYSLVRREYPTPIGPVDILCRDDKGGSVAVEIKRRGGIDGVEQLSRYLELLNRD
HHHHCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
DLLAPVAGVFAAQHIKPQARTLAEDRGIRCVTLDYDSLRGIESTELRLF
CHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC
>Mature Secondary Structure
MRLVIARCSVDYIGRLEAHLPMADRLLMVKADGSVSIHADDRAYKPLNWMTPPCTLTETT
CEEEEEECCCHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCC
HEESETGESIPLWIVENKKGEQLRITIEALHSDMYYDLGEDPGLQKDGVEAHLQELLAEH
CCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCHHHEECCCCCCCCCCCHHHHHHHHHHHH
IETLGDGYSLVRREYPTPIGPVDILCRDDKGGSVAVEIKRRGGIDGVEQLSRYLELLNRD
HHHHCCCHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
DLLAPVAGVFAAQHIKPQARTLAEDRGIRCVTLDYDSLRGIESTELRLF
CHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14602910