Click here to switch to the map view.

The map label for this gene is 38233648

Identifier: 38233648

GI number: 38233648

Start: 1035514

End: 1035981

Strand: Direct

Name: 38233648

Synonym: DIP1054

Alternate gene names: NA

Gene position: 1035514-1035981 (Clockwise)

Preceding gene: 38233647

Following gene: 38233649

Centisome position: 41.61

GC content: 48.29

Gene sequence:

>468_bases
ATGAAGTTCGCCATTGGTATTACCCTTCTCTTATTGGTCCTCGCCGTGCTGCTTGCTGTCGCTGCATGGCGTTTTTTATA
CGTACGATGTAGCGGCTCTGCTGTAGTTATTCGTGAGTTACCGTCTCCTAGTGGCCGACATTGGCGTCATGGATCCATGA
GGTATCACGGCGAAGGATTGCAGTATTTCAAGCTCCGTTCCCTCAAACCTGGGCCAGATTTGGTCGTGGATCGCCAGCAA
GTGGATTATTTGGGGGCACGCCCACTTGAAGATTCCGAAATTTTATTGCTTCATTCCGATGCGACGGTTCACAAGATTAA
GTATTTGGCTCGAGAATATGAAGTAGCACTCGACAAATCTGCATCGATGGCTTTTGTTTCGTGGATTGAATCCGCTCCTA
GTCGACGTCAAGAACGGATCGACTACAACGCCTTGTATCGCAAAGTCGACCGGAATAAGCGTAAATAG

Upstream 100 bases:

>100_bases
GTTCCCGCTGGTAACCGTAGTAAAATGTCAGATTAACTATTTTTTGTGCAGTTGTTTTAGCTGTTCTGACATTCTCAGCC
TCGCCGCAAGGAGCAATGTG

Downstream 100 bases:

>100_bases
CCCTAACACGATAGGGTATTGAGCATGCGTCTTGTCATTGCTCGTTGTTCTGTCGATTATATTGGTCGCCTCGAAGCTCA
CCTTCCGATGGCCGATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKFAIGITLLLLVLAVLLAVAAWRFLYVRCSGSAVVIRELPSPSGRHWRHGSMRYHGEGLQYFKLRSLKPGPDLVVDRQQ
VDYLGARPLEDSEILLLHSDATVHKIKYLAREYEVALDKSASMAFVSWIESAPSRRQERIDYNALYRKVDRNKRK

Sequences:

>Translated_155_residues
MKFAIGITLLLLVLAVLLAVAAWRFLYVRCSGSAVVIRELPSPSGRHWRHGSMRYHGEGLQYFKLRSLKPGPDLVVDRQQ
VDYLGARPLEDSEILLLHSDATVHKIKYLAREYEVALDKSASMAFVSWIESAPSRRQERIDYNALYRKVDRNKRK
>Mature_155_residues
MKFAIGITLLLLVLAVLLAVAAWRFLYVRCSGSAVVIRELPSPSGRHWRHGSMRYHGEGLQYFKLRSLKPGPDLVVDRQQ
VDYLGARPLEDSEILLLHSDATVHKIKYLAREYEVALDKSASMAFVSWIESAPSRRQERIDYNALYRKVDRNKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1312 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019675 [H]

Pfam domain/function: PF10739 DUF2550 [H]

EC number: NA

Molecular weight: Translated: 17826; Mature: 17826

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAIGITLLLLVLAVLLAVAAWRFLYVRCSGSAVVIRELPSPSGRHWRHGSMRYHGEGL
CCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCCCEECCCCC
QYFKLRSLKPGPDLVVDRQQVDYLGARPLEDSEILLLHSDATVHKIKYLAREYEVALDKS
EEEEECCCCCCCCEEECHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
ASMAFVSWIESAPSRRQERIDYNALYRKVDRNKRK
CHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFAIGITLLLLVLAVLLAVAAWRFLYVRCSGSAVVIRELPSPSGRHWRHGSMRYHGEGL
CCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCCCCCCEECCCCC
QYFKLRSLKPGPDLVVDRQQVDYLGARPLEDSEILLLHSDATVHKIKYLAREYEVALDKS
EEEEECCCCCCCCEEECHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
ASMAFVSWIESAPSRRQERIDYNALYRKVDRNKRK
CHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]