| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is gtaB [H]
Identifier: 38233459
GI number: 38233459
Start: 834145
End: 835065
Strand: Direct
Name: gtaB [H]
Synonym: DIP0862
Alternate gene names: 38233459
Gene position: 834145-835065 (Clockwise)
Preceding gene: 38233455
Following gene: 38233460
Centisome position: 33.52
GC content: 53.53
Gene sequence:
>921_bases ATGACTTCACCCAAGAGTGGTAATTCGTGTGCCGTCAGAACCGTGATCGTCCCAGCTGCTGGTTTGGGTACACGGTTTCT CCCTGCCACAAAGACCGTCCCTAAGGAGCTCCTTCCTGTCGTCGATACGCCAGGTATCGAGCTGATTGCTGAGGAGGCCG CGCAGTTGGGGGCAATGCGTTTGGCTGTGATTACGGCGCCGAAAAAGCAGGAAGTGTTGGATCACTTCAACAGGTTCCCA GAGCTGGAAGCAACGTTGGAAAGTCGTGGCAAGAAGGATCAGCTGGCAAAGGTTGTGCGTGCTGCTGAACTGATTCAGCC GGTTTCTGTGGTTCAAGAGACTCCGCTTGGTCTGGGGCATGCAGTGGGGTTGGCGGAAAGCGTGTTGGATGACGATGAAG ACGTCGTAGCTGTCATGCTTCCGGATGACTTGGTGCTGCCCATGGGCGTTGTGGAAAAGATGGTGGAGGTGCGTCGCCAG CTGGGAGGCTCTGTGCTGTGCGCTTTCGATGTTCCTCGTGAAGATGTGTATAACTACGGCGTCTTTGATATTGAGGAGTG CGATTACGACGGCCCTTACCAAGTCAAGAGTGTGAAAGGCATGGTGGAAAAGCCAGCCGTAGAAGACGCACCTTCGACGT TTGTTGCAACAGGTCGTTATCTTTTGGATCGTGCGATTTTTGATGCGCTTCGCCGTATCACCCCTGGTGCGGGCGGTGAG CTGCAGCTTACTGATGCTATTGCGTTGCTTATTAATGAGGGGCATCCAGTCCACATCTTGGTTCACGATGGAAAGCGCCA TGATTTGGGAAATCCTGGTGGTTATATCCCAGCGGTGGTGGATTTTGGTTTGTCGGATCCGACGTATGGCCCACATTTGA AGAAGGTCCTGCGTACCATTTTGGAAGAGCACGGCGCTTAA
Upstream 100 bases:
>100_bases CGTTTCCCCACGGGGAGGGGTCTCAGAATGTGACTTTTAATTTCGGTTTTCCTTGGTGCCGAAACCTATCTGGGGCATAG TTCGCGGTACTGTTTTCTTT
Downstream 100 bases:
>100_bases AAGTCACCCTGTGGGGTAAGCGCAGGTGTTGTGTGTTTTCGTGAGAAAGGGCACACTGCCTAGGAGAGAAGTTCACCAGT TTTAAAGGAGTCGGACGTGC
Product: putative urydyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTSPKSGNSCAVRTVIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAEEAAQLGAMRLAVITAPKKQEVLDHFNRFP ELEATLESRGKKDQLAKVVRAAELIQPVSVVQETPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPMGVVEKMVEVRRQ LGGSVLCAFDVPREDVYNYGVFDIEECDYDGPYQVKSVKGMVEKPAVEDAPSTFVATGRYLLDRAIFDALRRITPGAGGE LQLTDAIALLINEGHPVHILVHDGKRHDLGNPGGYIPAVVDFGLSDPTYGPHLKKVLRTILEEHGA
Sequences:
>Translated_306_residues MTSPKSGNSCAVRTVIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAEEAAQLGAMRLAVITAPKKQEVLDHFNRFP ELEATLESRGKKDQLAKVVRAAELIQPVSVVQETPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPMGVVEKMVEVRRQ LGGSVLCAFDVPREDVYNYGVFDIEECDYDGPYQVKSVKGMVEKPAVEDAPSTFVATGRYLLDRAIFDALRRITPGAGGE LQLTDAIALLINEGHPVHILVHDGKRHDLGNPGGYIPAVVDFGLSDPTYGPHLKKVLRTILEEHGA >Mature_305_residues TSPKSGNSCAVRTVIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAEEAAQLGAMRLAVITAPKKQEVLDHFNRFPE LEATLESRGKKDQLAKVVRAAELIQPVSVVQETPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPMGVVEKMVEVRRQL GGSVLCAFDVPREDVYNYGVFDIEECDYDGPYQVKSVKGMVEKPAVEDAPSTFVATGRYLLDRAIFDALRRITPGAGGEL QLTDAIALLINEGHPVHILVHDGKRHDLGNPGGYIPAVVDFGLSDPTYGPHLKKVLRTILEEHGA
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=294, Percent_Identity=37.7551020408163, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI1788355, Length=302, Percent_Identity=35.0993377483444, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32935; Mature: 32804
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPKSGNSCAVRTVIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAEEAAQLGAMR CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHEE LAVITAPKKQEVLDHFNRFPELEATLESRGKKDQLAKVVRAAELIQPVSVVQETPLGLGH EEEEECCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AVGLAESVLDDDEDVVAVMLPDDLVLPMGVVEKMVEVRRQLGGSVLCAFDVPREDVYNYG HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCC VFDIEECDYDGPYQVKSVKGMVEKPAVEDAPSTFVATGRYLLDRAIFDALRRITPGAGGE CEEHHCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LQLTDAIALLINEGHPVHILVHDGKRHDLGNPGGYIPAVVDFGLSDPTYGPHLKKVLRTI EEHHHHHEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHEECCCCCCCCCHHHHHHHHHH LEEHGA HHHCCC >Mature Secondary Structure TSPKSGNSCAVRTVIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELIAEEAAQLGAMR CCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHEE LAVITAPKKQEVLDHFNRFPELEATLESRGKKDQLAKVVRAAELIQPVSVVQETPLGLGH EEEEECCCHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AVGLAESVLDDDEDVVAVMLPDDLVLPMGVVEKMVEVRRQLGGSVLCAFDVPREDVYNYG HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCC VFDIEECDYDGPYQVKSVKGMVEKPAVEDAPSTFVATGRYLLDRAIFDALRRITPGAGGE CEEHHCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC LQLTDAIALLINEGHPVHILVHDGKRHDLGNPGGYIPAVVDFGLSDPTYGPHLKKVLRTI EEHHHHHEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHEECCCCCCCCCHHHHHHHHHH LEEHGA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA