Click here to switch to the map view.

The map label for this gene is 38233322

Identifier: 38233322

GI number: 38233322

Start: 687400

End: 688662

Strand: Reverse

Name: 38233322

Synonym: DIP0716

Alternate gene names: NA

Gene position: 688662-687400 (Counterclockwise)

Preceding gene: 38233323

Following gene: 38233319

Centisome position: 27.67

GC content: 55.11

Gene sequence:

>1263_bases
ATGAAACCATCCGGCCAGGAAAAACCTCGCCGTAGGAGTCCTAAGACAGGCACACTACAAGGCAGCCGGCGCGACTATGT
TGCCACAGCAATCATTTCGGTGATGTGTGCGGGCGCAGTGGCCAGCGTATGGGCGACTGCACCCGCGAGACATTCGCACC
TCACGCCTGCATCATCTCAAGCAGATTCTGCACAGGATTTTTACGCCGTACCCCGTGCACTTACTGCATTGCCTTCCGAA
GCAACTCCTGTAAAAACGCTTCCCGCGGATCCATGGTCACCGCGGCCGATCATTGCCGAAGGCCTAGTGATTTCTTATAA
GGACAGGACAGTAACCGCAATCGATCCCAATGATGGCAGCACAGTGTGGAGCTATTCCCGCGACGTACCACTGTGCTCAC
TAGCTCAAGCATGGGGTGAGGTGGTGATGACATATAAGACGGGTCGCGGCTGTGGCGATGTGATAGCAGTATCCGCTAGC
TCAGGACAGTACTCGGCAACAAGGAGTGCGTCGGCAAGCGAAAATGTCTCACCTATTATGTCCAACGATCGTGTCGGTAT
CGTCTCCGACCAGCGTGTGGAACTGTGGCGTTCTGATTTAGTACGCACCGTGGAATACGGTGACGTCCCCATTAAGCAAG
AGGCCCACCTACAGCCACACGAAGACTGCAGCATTACTTCTGCACTGACGCGAAAAGATCTGTTGGCCGTTGTGGATTCC
TGCGAAGGCTCATCGTGGTTACGTTTGCAAAAGACGACGCCGGAAGATTCTCGGCAACCAGAAATTACTCAAGATATTGA
TCTCGGCAACACCACCGCTCATGTTGTTGCGGTGGGACAAACAGGCGCTGCAGTAGCCGTAAACTCCCCCACGCCTGCGA
TTATTAGCTTCGACGCGCATGGGCACGAAGTCGCACGCCATGAGATCCCCCAAGCCCCAGAGATCACGAATACCGCGCCG
CTCGTTGCCGATTTAACGCATTACATCACGTGGTACCACAATCACACACTGTATTTAATGCGCCCCGACACCCTCGCTGT
AGAGCGGGAACTTCCCGACGCTGTAGGCACCGGAATCAGCCTCGGAGCTCACGTGGCTTATCCCACGGCCGAAGGGTGGA
CAGAGATCGAACCTATGTCTGGGCAGGTAATACGCACTGTCCCAGTTGATCGCGGCGGCTACACCGGCTTTGTATCGATG
GGCATTGCGGAACTCCACATCGTGGAAAAACGCGGGGACCAAGTAGTCATTTTCCGTCAGTAG

Upstream 100 bases:

>100_bases
CCGTAGGACGCTCCCGTACAGCGGTGGGATCCCGCAAGTTTAATAAAAGCCGGTCGCCACGCTCGCAACGCCGCCCCAGC
AACAAATCTGGAAAGCGCTC

Downstream 100 bases:

>100_bases
TTTCGCGCAGCCCAATCGAGCGAACGAGGGCTGAACAAATACACAAGGGTTGCGATCGCCGAAGCACATGTCACCACGGC
GAGAAGCAAGGCGTGGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Alanine And Valine Rich Protein

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKPSGQEKPRRRSPKTGTLQGSRRDYVATAIISVMCAGAVASVWATAPARHSHLTPASSQADSAQDFYAVPRALTALPSE
ATPVKTLPADPWSPRPIIAEGLVISYKDRTVTAIDPNDGSTVWSYSRDVPLCSLAQAWGEVVMTYKTGRGCGDVIAVSAS
SGQYSATRSASASENVSPIMSNDRVGIVSDQRVELWRSDLVRTVEYGDVPIKQEAHLQPHEDCSITSALTRKDLLAVVDS
CEGSSWLRLQKTTPEDSRQPEITQDIDLGNTTAHVVAVGQTGAAVAVNSPTPAIISFDAHGHEVARHEIPQAPEITNTAP
LVADLTHYITWYHNHTLYLMRPDTLAVERELPDAVGTGISLGAHVAYPTAEGWTEIEPMSGQVIRTVPVDRGGYTGFVSM
GIAELHIVEKRGDQVVIFRQ

Sequences:

>Translated_420_residues
MKPSGQEKPRRRSPKTGTLQGSRRDYVATAIISVMCAGAVASVWATAPARHSHLTPASSQADSAQDFYAVPRALTALPSE
ATPVKTLPADPWSPRPIIAEGLVISYKDRTVTAIDPNDGSTVWSYSRDVPLCSLAQAWGEVVMTYKTGRGCGDVIAVSAS
SGQYSATRSASASENVSPIMSNDRVGIVSDQRVELWRSDLVRTVEYGDVPIKQEAHLQPHEDCSITSALTRKDLLAVVDS
CEGSSWLRLQKTTPEDSRQPEITQDIDLGNTTAHVVAVGQTGAAVAVNSPTPAIISFDAHGHEVARHEIPQAPEITNTAP
LVADLTHYITWYHNHTLYLMRPDTLAVERELPDAVGTGISLGAHVAYPTAEGWTEIEPMSGQVIRTVPVDRGGYTGFVSM
GIAELHIVEKRGDQVVIFRQ
>Mature_420_residues
MKPSGQEKPRRRSPKTGTLQGSRRDYVATAIISVMCAGAVASVWATAPARHSHLTPASSQADSAQDFYAVPRALTALPSE
ATPVKTLPADPWSPRPIIAEGLVISYKDRTVTAIDPNDGSTVWSYSRDVPLCSLAQAWGEVVMTYKTGRGCGDVIAVSAS
SGQYSATRSASASENVSPIMSNDRVGIVSDQRVELWRSDLVRTVEYGDVPIKQEAHLQPHEDCSITSALTRKDLLAVVDS
CEGSSWLRLQKTTPEDSRQPEITQDIDLGNTTAHVVAVGQTGAAVAVNSPTPAIISFDAHGHEVARHEIPQAPEITNTAP
LVADLTHYITWYHNHTLYLMRPDTLAVERELPDAVGTGISLGAHVAYPTAEGWTEIEPMSGQVIRTVPVDRGGYTGFVSM
GIAELHIVEKRGDQVVIFRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45279; Mature: 45279

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSGQEKPRRRSPKTGTLQGSRRDYVATAIISVMCAGAVASVWATAPARHSHLTPASSQ
CCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ADSAQDFYAVPRALTALPSEATPVKTLPADPWSPRPIIAEGLVISYKDRTVTAIDPNDGS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCEEEEECCCCCC
TVWSYSRDVPLCSLAQAWGEVVMTYKTGRGCGDVIAVSASSGQYSATRSASASENVSPIM
EEEEECCCCCHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
SNDRVGIVSDQRVELWRSDLVRTVEYGDVPIKQEAHLQPHEDCSITSALTRKDLLAVVDS
CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
CEGSSWLRLQKTTPEDSRQPEITQDIDLGNTTAHVVAVGQTGAAVAVNSPTPAIISFDAH
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEECCC
GHEVARHEIPQAPEITNTAPLVADLTHYITWYHNHTLYLMRPDTLAVERELPDAVGTGIS
CCHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEECCEEEEECCCCEEEHHHCCHHHCCCCC
LGAHVAYPTAEGWTEIEPMSGQVIRTVPVDRGGYTGFVSMGIAELHIVEKRGDQVVIFRQ
CCCEEECCCCCCCCEECCCCCCEEEEEECCCCCCEEEEECCEEEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MKPSGQEKPRRRSPKTGTLQGSRRDYVATAIISVMCAGAVASVWATAPARHSHLTPASSQ
CCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ADSAQDFYAVPRALTALPSEATPVKTLPADPWSPRPIIAEGLVISYKDRTVTAIDPNDGS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCEEEEECCCCCC
TVWSYSRDVPLCSLAQAWGEVVMTYKTGRGCGDVIAVSASSGQYSATRSASASENVSPIM
EEEEECCCCCHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
SNDRVGIVSDQRVELWRSDLVRTVEYGDVPIKQEAHLQPHEDCSITSALTRKDLLAVVDS
CCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
CEGSSWLRLQKTTPEDSRQPEITQDIDLGNTTAHVVAVGQTGAAVAVNSPTPAIISFDAH
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEECCC
GHEVARHEIPQAPEITNTAPLVADLTHYITWYHNHTLYLMRPDTLAVERELPDAVGTGIS
CCHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEECCEEEEECCCCEEEHHHCCHHHCCCCC
LGAHVAYPTAEGWTEIEPMSGQVIRTVPVDRGGYTGFVSMGIAELHIVEKRGDQVVIFRQ
CCCEEECCCCCCCCEECCCCCCEEEEEECCCCCCEEEEECCEEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA