Click here to switch to the map view.

The map label for this gene is 38233319

Identifier: 38233319

GI number: 38233319

Start: 686052

End: 686312

Strand: Reverse

Name: 38233319

Synonym: DIP0712

Alternate gene names: NA

Gene position: 686312-686052 (Counterclockwise)

Preceding gene: 38233322

Following gene: 38233318

Centisome position: 27.58

GC content: 62.84

Gene sequence:

>261_bases
ATGGATTGGCGCCATGAAGCCGTTTGTCGCGATGAAGATCCCGAGCTCTTCTTCCCTGTCGGCAACTCTGGCCCAGCGTT
GGCACAGGTCGCTGCAGCAAAAGTAGTGTGCAACCGCTGCCCAGTTACCTCCCAGTGCCTCGCATGGGCATTGGAAACCG
GCCAGGATGCCGGCGTTTGGGGCGGCATGAGCGAAGATGAGCGTCGCGCGCTCAAGCGCCGTAAGAACCGCGGCCGTGGT
CGCGCACGCGCTACCGCATAG

Upstream 100 bases:

>100_bases
CGTGATTCTGCCACCTTCCCCAGCCAACAACTGTCGGAAAGTAAGTTTCGTATGCCCTCAAAGTGCCCTGTTGAACGTGT
AGTGATTTTAGGAGACCACA

Downstream 100 bases:

>100_bases
CTGGTACCCCCTGTGGGGTTTCCCCACCGATTTTCCGAGTCACCTCCTCACCTACTAAGGTGGTGTTTCGATATTGACAT
TTTCTGCAACCTATAAGGAG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; Regulatory Protein; WhiB Family Transcription Factor; Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcription Factor WhiB Family; WhiB Family Regulatory Protein; Transcription Regulatory Protein; Transcription Factor; WhiB Family Cell Cycle Control Transcriptional Regulator; Transcriptional Regulator WhiB; WhiB-Type Transcription Regulator; WhiB Transcriptional Regulator; WhiB Family Transcription Regulator

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MDWRHEAVCRDEDPELFFPVGNSGPALAQVAAAKVVCNRCPVTSQCLAWALETGQDAGVWGGMSEDERRALKRRKNRGRG
RARATA

Sequences:

>Translated_86_residues
MDWRHEAVCRDEDPELFFPVGNSGPALAQVAAAKVVCNRCPVTSQCLAWALETGQDAGVWGGMSEDERRALKRRKNRGRG
RARATA
>Mature_86_residues
MDWRHEAVCRDEDPELFFPVGNSGPALAQVAAAKVVCNRCPVTSQCLAWALETGQDAGVWGGMSEDERRALKRRKNRGRG
RARATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9456; Mature: 9456

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRHEAVCRDEDPELFFPVGNSGPALAQVAAAKVVCNRCPVTSQCLAWALETGQDAGVW
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
GGMSEDERRALKRRKNRGRGRARATA
CCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDWRHEAVCRDEDPELFFPVGNSGPALAQVAAAKVVCNRCPVTSQCLAWALETGQDAGVW
CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
GGMSEDERRALKRRKNRGRGRARATA
CCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA