| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is wbbL [H]
Identifier: 38233288
GI number: 38233288
Start: 657162
End: 658052
Strand: Direct
Name: wbbL [H]
Synonym: DIP0681
Alternate gene names: 38233288
Gene position: 657162-658052 (Clockwise)
Preceding gene: 38233285
Following gene: 38233289
Centisome position: 26.41
GC content: 52.86
Gene sequence:
>891_bases GTGAGTAATTCCACTGAACCAGCTTTAGCAATCATTACTGTGACATATTCGCCTGGCAAACACTTGGGCGCGTTTTTGTC TTCTGTAAAAGAGGCGACTGCACAGCCCACGTATGTTGTGTTGGCGGATAACGGCTCAGTAGATGGTGTGCCAGAGGCGG CTGCGCAGGCAGATCCTTCAGTGGAATTTTTCCCCACGGGCGGAAATATTGGATACGGTTCAGCAATTAATGCGGCTGTG CGCAAGCTTGCGCCGCTGAGGGAATCTGGAAAGATCAATGCGGAATTTTTCGTGTTATCTAATCCCGATGTGGTTTTTGA ACCAGGTTCTATCGACGCCATGGTGCAATGTGCTTCTCGTCATCCGCAAGCAGCGGATATTGGGCCGTATATTCGCCAAT CTGATGGCTCGGCGTATCCATCAGCGCGCCAAGTGCCCACCATCAAAAATGGCGTGGGACATGCGTTGTTTAGCTCGGTG TGGCCTTCTAACCCATGGTCGCGGGCATATCGTGATAACCGAGACATGACTACTGAGCGTACGGCTGGCTGGTTGTCGGG ATCGTGTTTGCTAGTGCGCTGGGATGCTTTCGAGCAGATCGGTGGCTTTGATGAACGCTACTTCATGTACATGGAAGATG TGGATCTTGGTGATCGATTTGGCCGTGCGGGTTTTGATAACGTCTTTTGTCCCGATGCGGTGATTACGCATGCTGTTGGG CACGCGGCTGGTAAGCACCCAGAGAAGATGCTTCCTGCGCATCACGATTCGGCGTATCGTTTCCAAGCAGATCGCCATCC GGGGCTTCGTTACCTGCCGTTACGTGTCCTGCTGCGAGTAGGTTTGAAACTTCGCGCGGTAGTTGCGGTGGCGGCTGCGA AGTTCAAGTGA
Upstream 100 bases:
>100_bases GTAACTTTTTTCTTTATCCTCGTGTCCCAGCCACACCGTGATGGGTTTACACCGCGTGGCACTCCCTATCTGGTGGACGT ACACCGCTAGGCTGATTGCC
Downstream 100 bases:
>100_bases GTTCAATAATTAACTTACTTTTCTAGGATTGTTACACTATTTACCTTGAAGTAAGGACCCTCGGCTACGGCATAACGTTG GTGCAAAGCAATTGTTGTGT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSNSTEPALAIITVTYSPGKHLGAFLSSVKEATAQPTYVVLADNGSVDGVPEAAAQADPSVEFFPTGGNIGYGSAINAAV RKLAPLRESGKINAEFFVLSNPDVVFEPGSIDAMVQCASRHPQAADIGPYIRQSDGSAYPSARQVPTIKNGVGHALFSSV WPSNPWSRAYRDNRDMTTERTAGWLSGSCLLVRWDAFEQIGGFDERYFMYMEDVDLGDRFGRAGFDNVFCPDAVITHAVG HAAGKHPEKMLPAHHDSAYRFQADRHPGLRYLPLRVLLRVGLKLRAVVAVAAAKFK
Sequences:
>Translated_296_residues MSNSTEPALAIITVTYSPGKHLGAFLSSVKEATAQPTYVVLADNGSVDGVPEAAAQADPSVEFFPTGGNIGYGSAINAAV RKLAPLRESGKINAEFFVLSNPDVVFEPGSIDAMVQCASRHPQAADIGPYIRQSDGSAYPSARQVPTIKNGVGHALFSSV WPSNPWSRAYRDNRDMTTERTAGWLSGSCLLVRWDAFEQIGGFDERYFMYMEDVDLGDRFGRAGFDNVFCPDAVITHAVG HAAGKHPEKMLPAHHDSAYRFQADRHPGLRYLPLRVLLRVGLKLRAVVAVAAAKFK >Mature_295_residues SNSTEPALAIITVTYSPGKHLGAFLSSVKEATAQPTYVVLADNGSVDGVPEAAAQADPSVEFFPTGGNIGYGSAINAAVR KLAPLRESGKINAEFFVLSNPDVVFEPGSIDAMVQCASRHPQAADIGPYIRQSDGSAYPSARQVPTIKNGVGHALFSSVW PSNPWSRAYRDNRDMTTERTAGWLSGSCLLVRWDAFEQIGGFDERYFMYMEDVDLGDRFGRAGFDNVFCPDAVITHAVGH AAGKHPEKMLPAHHDSAYRFQADRHPGLRYLPLRVLLRVGLKLRAVVAVAAAKFK
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 32053; Mature: 31922
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSTEPALAIITVTYSPGKHLGAFLSSVKEATAQPTYVVLADNGSVDGVPEAAAQADPS CCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCC VEFFPTGGNIGYGSAINAAVRKLAPLRESGKINAEFFVLSNPDVVFEPGSIDAMVQCASR EEEEECCCCCCCCHHHHHHHHHHHCHHHCCCCCEEEEEEECCCEEECCCCHHHHHHHHHC HPQAADIGPYIRQSDGSAYPSARQVPTIKNGVGHALFSSVWPSNPWSRAYRDNRDMTTER CCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHH TAGWLSGSCLLVRWDAFEQIGGFDERYFMYMEDVDLGDRFGRAGFDNVFCPDAVITHAVG HCCEECCCEEEEEECHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHH HAAGKHPEKMLPAHHDSAYRFQADRHPGLRYLPLRVLLRVGLKLRAVVAVAAAKFK HHCCCCCHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure SNSTEPALAIITVTYSPGKHLGAFLSSVKEATAQPTYVVLADNGSVDGVPEAAAQADPS CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCC VEFFPTGGNIGYGSAINAAVRKLAPLRESGKINAEFFVLSNPDVVFEPGSIDAMVQCASR EEEEECCCCCCCCHHHHHHHHHHHCHHHCCCCCEEEEEEECCCEEECCCCHHHHHHHHHC HPQAADIGPYIRQSDGSAYPSARQVPTIKNGVGHALFSSVWPSNPWSRAYRDNRDMTTER CCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHH TAGWLSGSCLLVRWDAFEQIGGFDERYFMYMEDVDLGDRFGRAGFDNVFCPDAVITHAVG HCCEECCCEEEEEECHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHH HAAGKHPEKMLPAHHDSAYRFQADRHPGLRYLPLRVLLRVGLKLRAVVAVAAAKFK HHCCCCCHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]