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The map label for this gene is ccpA [H]

Identifier: 38233263

GI number: 38233263

Start: 631544

End: 632599

Strand: Reverse

Name: ccpA [H]

Synonym: DIP0656

Alternate gene names: 38233263

Gene position: 632599-631544 (Counterclockwise)

Preceding gene: 38233264

Following gene: 38233262

Centisome position: 25.42

GC content: 54.36

Gene sequence:

>1056_bases
ATGAGTGACATCTCTCAACCAACAGTTGAGAACGAAGAGAAATCACCTACATGGCGCAGACGGCGACAAAGCATCACGCT
GAAAGACATTGCCGCCGACACTGGCTTGTCTATCAGCACCGTGTCGCGAGCACTGGCCCGCAACCCCGTTATCCCCGAAT
CAACCCGTAGCATCGTCGAAGAAGCAGCTGGAAGACTCAACTACCGGCCCAATGCTCAGGCAAAGGCGCTCCGCAGCCAA
AAGTCCAATACCATTGGCATTGTCTTGCCAAATATCCGCAACCCTTACTTCAACCAGCTAGCATCAGCTATTCAAGAAGC
CGCAAGCCTTAAGGGCTACTGCTGCATGATGGCAAATTCGGCAGAATCGCCCGAGCTTATTAACAGTGCTTTGGATATTC
TCAACAGCCAGCAGGTTGACGGCATCATCGTAGTCCCCCACATTCAGTCAGCTCAACAAATCACTGCCATTACAGAACAA
GGCACACCCATCGTTGCGGCTGACCGAACAGTCACCCACAGTGCCGTTCCGTCTGTCACCTCTGATCCACTGCCAGCGAT
GAAAGAGGCTCTGCGAATGCTAAGCCTGAACCCAGGGGCGTCGATAGGATACCTTGCCGGGCCACAAGATACGTCGACAG
GCAGGGAGCGCCTCGAAGCGATCACGTCAATCAAGAGCGAACTGGGAATTCCTTCCCCTGACGTTTATTTTGGCGGCTAC
TCCAGCGAGGCCGGTTTTGCGGGCACACACGAGCTCCTTGACCGCGGAGTCAATAGCATTTTGACCGGCGATATGATGAT
GACGGTCGGCGCGATTCAGGCGATCTACGCCCGTGGACTTCGCATCGGTAAGGATGTGGCGTTGATCGGCTACGACAACA
CCCCAGCGTTCCTTCTCCAAGAACAACCTATCACCACCATCGATCAACAAGTCGATGACATGGGACAGCGCGCATTCGAC
ATGCTTTACTCACATATGAATAACGGCGAACGAGCAACGTCATGCGTCATCCCGACAACGCTTGCGCTGCGGGCTTCCCA
TTCGTTGGCGGTGTAG

Upstream 100 bases:

>100_bases
CCGTCACTAAGGGTTTCTCAATCTTGACTTAAAAACAGCGACCTCAGTAGATTCAAAATTAATAATAAGTACGCAAACGT
TTGCAGAAAAGTAGGTACGC

Downstream 100 bases:

>100_bases
CACTTCTCACCCCCACGGCAGAAATCCAGCCACCGACCATATTTTTCCTTAATAATGGTGAATAAGTACTTCCCAAGGAC
TACCTACGCCCTTGACGTAG

Product: putative transcriptional regulatory protein

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSDISQPTVENEEKSPTWRRRRQSITLKDIAADTGLSISTVSRALARNPVIPESTRSIVEEAAGRLNYRPNAQAKALRSQ
KSNTIGIVLPNIRNPYFNQLASAIQEAASLKGYCCMMANSAESPELINSALDILNSQQVDGIIVVPHIQSAQQITAITEQ
GTPIVAADRTVTHSAVPSVTSDPLPAMKEALRMLSLNPGASIGYLAGPQDTSTGRERLEAITSIKSELGIPSPDVYFGGY
SSEAGFAGTHELLDRGVNSILTGDMMMTVGAIQAIYARGLRIGKDVALIGYDNTPAFLLQEQPITTIDQQVDDMGQRAFD
MLYSHMNNGERATSCVIPTTLALRASHSLAV

Sequences:

>Translated_351_residues
MSDISQPTVENEEKSPTWRRRRQSITLKDIAADTGLSISTVSRALARNPVIPESTRSIVEEAAGRLNYRPNAQAKALRSQ
KSNTIGIVLPNIRNPYFNQLASAIQEAASLKGYCCMMANSAESPELINSALDILNSQQVDGIIVVPHIQSAQQITAITEQ
GTPIVAADRTVTHSAVPSVTSDPLPAMKEALRMLSLNPGASIGYLAGPQDTSTGRERLEAITSIKSELGIPSPDVYFGGY
SSEAGFAGTHELLDRGVNSILTGDMMMTVGAIQAIYARGLRIGKDVALIGYDNTPAFLLQEQPITTIDQQVDDMGQRAFD
MLYSHMNNGERATSCVIPTTLALRASHSLAV
>Mature_350_residues
SDISQPTVENEEKSPTWRRRRQSITLKDIAADTGLSISTVSRALARNPVIPESTRSIVEEAAGRLNYRPNAQAKALRSQK
SNTIGIVLPNIRNPYFNQLASAIQEAASLKGYCCMMANSAESPELINSALDILNSQQVDGIIVVPHIQSAQQITAITEQG
TPIVAADRTVTHSAVPSVTSDPLPAMKEALRMLSLNPGASIGYLAGPQDTSTGRERLEAITSIKSELGIPSPDVYFGGYS
SEAGFAGTHELLDRGVNSILTGDMMMTVGAIQAIYARGLRIGKDVALIGYDNTPAFLLQEQPITTIDQQVDDMGQRAFDM
LYSHMNNGERATSCVIPTTLALRASHSLAV

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790194, Length=303, Percent_Identity=28.3828382838284, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI1790369, Length=328, Percent_Identity=26.5243902439024, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1788474, Length=332, Percent_Identity=28.6144578313253, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787948, Length=310, Percent_Identity=27.4193548387097, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI1789068, Length=301, Percent_Identity=27.2425249169435, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1789202, Length=296, Percent_Identity=26.0135135135135, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786540, Length=324, Percent_Identity=27.1604938271605, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790689, Length=319, Percent_Identity=24.1379310344828, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787906, Length=210, Percent_Identity=26.1904761904762, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789456, Length=340, Percent_Identity=25.8823529411765, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786268, Length=315, Percent_Identity=22.5396825396825, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1787580, Length=334, Percent_Identity=23.3532934131737, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI48994940, Length=146, Percent_Identity=28.7671232876712, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37697; Mature: 37566

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDISQPTVENEEKSPTWRRRRQSITLKDIAADTGLSISTVSRALARNPVIPESTRSIVE
CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
EAAGRLNYRPNAQAKALRSQKSNTIGIVLPNIRNPYFNQLASAIQEAASLKGYCCMMANS
HHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
AESPELINSALDILNSQQVDGIIVVPHIQSAQQITAITEQGTPIVAADRTVTHSAVPSVT
CCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHCCCCC
SDPLPAMKEALRMLSLNPGASIGYLAGPQDTSTGRERLEAITSIKSELGIPSPDVYFGGY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC
SSEAGFAGTHELLDRGVNSILTGDMMMTVGAIQAIYARGLRIGKDVALIGYDNTPAFLLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEE
EQPITTIDQQVDDMGQRAFDMLYSHMNNGERATSCVIPTTLALRASHSLAV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDISQPTVENEEKSPTWRRRRQSITLKDIAADTGLSISTVSRALARNPVIPESTRSIVE
CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
EAAGRLNYRPNAQAKALRSQKSNTIGIVLPNIRNPYFNQLASAIQEAASLKGYCCMMANS
HHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
AESPELINSALDILNSQQVDGIIVVPHIQSAQQITAITEQGTPIVAADRTVTHSAVPSVT
CCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHCCCCC
SDPLPAMKEALRMLSLNPGASIGYLAGPQDTSTGRERLEAITSIKSELGIPSPDVYFGGY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCC
SSEAGFAGTHELLDRGVNSILTGDMMMTVGAIQAIYARGLRIGKDVALIGYDNTPAFLLQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEE
EQPITTIDQQVDDMGQRAFDMLYSHMNNGERATSCVIPTTLALRASHSLAV
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]