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The map label for this gene is yhjD [H]

Identifier: 38233243

GI number: 38233243

Start: 606805

End: 607965

Strand: Direct

Name: yhjD [H]

Synonym: DIP0636

Alternate gene names: 38233243

Gene position: 606805-607965 (Clockwise)

Preceding gene: 38233242

Following gene: 38233245

Centisome position: 24.38

GC content: 55.9

Gene sequence:

>1161_bases
ATGGCGTCTCGAGGCTCAGGAAAAATCTCAGCAAACACCGTTGTGCCCGCATCATCGCGTGCCGCGCACCAACGTGAGAG
CATTCGCGCCATGTCCACGCGCCAAAACCGCAACAAGACAGACGAGTTCGGCATTGAACGATCAACCGCCGACGACCCTG
GGATCGTCGACAAGCTGCGTCTTAAGTGGGGGTGGTTTGACCATCTCATGCGTATGAATGAGCGGTACAGCCAAGAAGGC
GGCAACCAGTACTCCGCGGGCATTACGTATTTTTCTGTGTTGTCGATGTTCCCGATCCTCATGCTCGTCATGGCAGCGGC
AGCAACTATCCTTGCTCGCCAGCCAGAAACACTGCAGCAATTACAGGAAAGAATCACCGATTCTGTCGACGCTTCCATCG
CAGATACCCTCAAAGAAATCCTCGATACCGCCATCAGTCAACGTGGTGCCATGTTCGGCATCGGTGGTCTTACTGCCTTG
TGGTCCGGCCTAAGCTGGATGTCGCACCTGCGCTACGGGGCGTCGAAAATGTGGCGCTACCCAGTCACTGGCGATAACTT
TGCGAAAACCAAATTCCAGGATTTTCTTGGATTCCTCAGCCTGCTCGTAGCCATGGGTATCGCGCTGGGTATCACCGCTA
TCGGATCCTCCGGCCTGACGACGCAGCTTATCGACGCCATCGGGCTTGCCGACGTCCCCGGCATCTTCCTTCTCACATTC
GTCATCTCTTTAGTCGTGGGACTCATCGCCAACTTCTGCGTATTCCTCTGGCTTATCAAATACCTCCCCCGAGGTGAAGT
CCCCGCAAAATCTGCCCTTAAAGCCGCAGGTATTGGTGCTGTGCTCTTTGAGATCTTCAAGCAACTTGCATCGCAATTCT
TCTCAAACGCATTGAGCAACCCCGCAGGAGCGACCTTCGGCCCCATCATCGGACTCATGGTCTTGCTCTACTTCGTCTGG
CGCATCCTTATGTACTGCTGCGCTTGGGCTGCAACCACCGCGGAATCCCTCGCCATTGCCAAACTCGAGCCGCCAGCACC
AGCCGTCATTCGCGTTCGCGAAGAAATCCGCACCGGTGGCGACAAAGGCAAAGGCATCGGAATCGGCATCGCCGGTGCTG
CAGCCGCTACCGCCTTGTTGTCACTGTGGAAGCGAAAGTAG

Upstream 100 bases:

>100_bases
TCCGACTGCTTCGCCACTATGAGGCAGCCGGATTGCTGTTTCTGCCTATAGTCTGGATTAAGTCCCCAGCTCACAATGAT
TTAAAAAGGCAGAAATTCTT

Downstream 100 bases:

>100_bases
CTCCCAACGACTCCTAGAATCCGCCTGATTCAACAAAATAAAAACAACCCTCTGGGTACGCAGACGATGATACACATCGT
CTGCGTACCCAGAGGTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MASRGSGKISANTVVPASSRAAHQRESIRAMSTRQNRNKTDEFGIERSTADDPGIVDKLRLKWGWFDHLMRMNERYSQEG
GNQYSAGITYFSVLSMFPILMLVMAAAATILARQPETLQQLQERITDSVDASIADTLKEILDTAISQRGAMFGIGGLTAL
WSGLSWMSHLRYGASKMWRYPVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLADVPGIFLLTF
VISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQLASQFFSNALSNPAGATFGPIIGLMVLLYFVW
RILMYCCAWAATTAESLAIAKLEPPAPAVIRVREEIRTGGDKGKGIGIGIAGAAAATALLSLWKRK

Sequences:

>Translated_386_residues
MASRGSGKISANTVVPASSRAAHQRESIRAMSTRQNRNKTDEFGIERSTADDPGIVDKLRLKWGWFDHLMRMNERYSQEG
GNQYSAGITYFSVLSMFPILMLVMAAAATILARQPETLQQLQERITDSVDASIADTLKEILDTAISQRGAMFGIGGLTAL
WSGLSWMSHLRYGASKMWRYPVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLADVPGIFLLTF
VISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQLASQFFSNALSNPAGATFGPIIGLMVLLYFVW
RILMYCCAWAATTAESLAIAKLEPPAPAVIRVREEIRTGGDKGKGIGIGIAGAAAATALLSLWKRK
>Mature_385_residues
ASRGSGKISANTVVPASSRAAHQRESIRAMSTRQNRNKTDEFGIERSTADDPGIVDKLRLKWGWFDHLMRMNERYSQEGG
NQYSAGITYFSVLSMFPILMLVMAAAATILARQPETLQQLQERITDSVDASIADTLKEILDTAISQRGAMFGIGGLTALW
SGLSWMSHLRYGASKMWRYPVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLADVPGIFLLTFV
ISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQLASQFFSNALSNPAGATFGPIIGLMVLLYFVWR
ILMYCCAWAATTAESLAIAKLEPPAPAVIRVREEIRTGGDKGKGIGIGIAGAAAATALLSLWKRK

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=271, Percent_Identity=34.3173431734317, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 41712; Mature: 41581

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGSGKISANTVVPASSRAAHQRESIRAMSTRQNRNKTDEFGIERSTADDPGIVDKLR
CCCCCCCCEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHH
LKWGWFDHLMRMNERYSQEGGNQYSAGITYFSVLSMFPILMLVMAAAATILARQPETLQQ
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LQERITDSVDASIADTLKEILDTAISQRGAMFGIGGLTALWSGLSWMSHLRYGASKMWRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCC
PVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLADVPGIFLLTF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH
VISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQLASQFFSNALSN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PAGATFGPIIGLMVLLYFVWRILMYCCAWAATTAESLAIAKLEPPAPAVIRVREEIRTGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCC
DKGKGIGIGIAGAAAATALLSLWKRK
CCCCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASRGSGKISANTVVPASSRAAHQRESIRAMSTRQNRNKTDEFGIERSTADDPGIVDKLR
CCCCCCCEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHH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CCCCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]