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The map label for this gene is fdhD [H]

Identifier: 38233140

GI number: 38233140

Start: 497871

End: 498605

Strand: Reverse

Name: fdhD [H]

Synonym: DIP0531

Alternate gene names: 38233140

Gene position: 498605-497871 (Counterclockwise)

Preceding gene: 38233141

Following gene: 38233132

Centisome position: 20.04

GC content: 54.15

Gene sequence:

>735_bases
ATGGCACGTATAACTTCGCTGACCGCTGTTGATTCATTCTTTTGCGAAGACGATCAGTGGCAGCATGGCACACGCCAGCG
CACTGTGTTAAACGATGAGCAGCTGAGCGTGCTTATCCACGCCACCCCGTACACCACCGTTGATCGCGTCCGCGGGCACG
ATGTGGAACTTATCCACGGCATGCTACGGCAACAAGGGGTGATTGTTTCAGCACAGCAGGTTTCTCAAGCATGTTATTGT
GCGGGATCGGTAGCGGGGGTTAATCCCTATAACCGGATGGATATTGACATCATCCCTGTCGAGGATTCCCCAGAACCTGT
ACAAACATCAACGCTTAGGTGCACGCCGGAGCAGATCCAGGCGGCATATCGTAGGTTGCTTAAGCAGGCTGACCTTAGGC
GCAAAACAGCAGCAACGCATGCTGCTGGAATTTTCGGCTCTGATGGTGCCGAGATTGTTGTTCGTGAGTGTCTCACGGCT
CATCAAGCAGGCTGGAAAGTTCTGGGTGTGGCGATGATGTCCGAAGATTATGATAACGCCGTCATTTTTGCCACCACAGG
GCTTATCGACGCCACCGTGGTTGAGATTGCTCGGATGTGTGGTTGTAGCACTGTGGTTTCGTCGGCGCCTGCGGTTACTT
CCGCGATTGCCGACGCCCACCGTGCGGGCATCACGCTCATTGGAGCACTGGGTGATGCTACCTTCAAGCTCTACGCAGGA
GCTGTAGATCTGTAA

Upstream 100 bases:

>100_bases
TCGCAGTCCCCGAAGGCTGGCACATCGCGTTGTCCACAGAGGAATGCCACGATGTTGTTGCAGCTAATAGTGCTGCTTGG
CTGCTGCGTGAAGGAGACTC

Downstream 100 bases:

>100_bases
TTAATCGCGGTAGTTTTCGCTGCCGCGATTCAGCCATGCATATACGCCGCCGATGCATAGTCCGCCGCCAACGAGGTTGC
CAAAGAAGTCGATACCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MARITSLTAVDSFFCEDDQWQHGTRQRTVLNDEQLSVLIHATPYTTVDRVRGHDVELIHGMLRQQGVIVSAQQVSQACYC
AGSVAGVNPYNRMDIDIIPVEDSPEPVQTSTLRCTPEQIQAAYRRLLKQADLRRKTAATHAAGIFGSDGAEIVVRECLTA
HQAGWKVLGVAMMSEDYDNAVIFATTGLIDATVVEIARMCGCSTVVSSAPAVTSAIADAHRAGITLIGALGDATFKLYAG
AVDL

Sequences:

>Translated_244_residues
MARITSLTAVDSFFCEDDQWQHGTRQRTVLNDEQLSVLIHATPYTTVDRVRGHDVELIHGMLRQQGVIVSAQQVSQACYC
AGSVAGVNPYNRMDIDIIPVEDSPEPVQTSTLRCTPEQIQAAYRRLLKQADLRRKTAATHAAGIFGSDGAEIVVRECLTA
HQAGWKVLGVAMMSEDYDNAVIFATTGLIDATVVEIARMCGCSTVVSSAPAVTSAIADAHRAGITLIGALGDATFKLYAG
AVDL
>Mature_243_residues
ARITSLTAVDSFFCEDDQWQHGTRQRTVLNDEQLSVLIHATPYTTVDRVRGHDVELIHGMLRQQGVIVSAQQVSQACYCA
GSVAGVNPYNRMDIDIIPVEDSPEPVQTSTLRCTPEQIQAAYRRLLKQADLRRKTAATHAAGIFGSDGAEIVVRECLTAH
QAGWKVLGVAMMSEDYDNAVIFATTGLIDATVVEIARMCGCSTVVSSAPAVTSAIADAHRAGITLIGALGDATFKLYAGA
VDL

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 26207; Mature: 26076

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARITSLTAVDSFFCEDDQWQHGTRQRTVLNDEQLSVLIHATPYTTVDRVRGHDVELIHG
CCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHCCCCHHHHHH
MLRQQGVIVSAQQVSQACYCAGSVAGVNPYNRMDIDIIPVEDSPEPVQTSTLRCTPEQIQ
HHHHCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHH
AAYRRLLKQADLRRKTAATHAAGIFGSDGAEIVVRECLTAHQAGWKVLGVAMMSEDYDNA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEHEECCCCCCCE
VIFATTGLIDATVVEIARMCGCSTVVSSAPAVTSAIADAHRAGITLIGALGDATFKLYAG
EEEEECCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCEEEEECC
AVDL
CCCC
>Mature Secondary Structure 
ARITSLTAVDSFFCEDDQWQHGTRQRTVLNDEQLSVLIHATPYTTVDRVRGHDVELIHG
CCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHCCCCHHHHHH
MLRQQGVIVSAQQVSQACYCAGSVAGVNPYNRMDIDIIPVEDSPEPVQTSTLRCTPEQIQ
HHHHCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECHHHHH
AAYRRLLKQADLRRKTAATHAAGIFGSDGAEIVVRECLTAHQAGWKVLGVAMMSEDYDNA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEEHEECCCCCCCE
VIFATTGLIDATVVEIARMCGCSTVVSSAPAVTSAIADAHRAGITLIGALGDATFKLYAG
EEEEECCCHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCEEEEEECCCCEEEEECC
AVDL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]