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The map label for this gene is cstA [H]

Identifier: 38233071

GI number: 38233071

Start: 429616

End: 430317

Strand: Direct

Name: cstA [H]

Synonym: DIP0459

Alternate gene names: 38233071

Gene position: 429616-430317 (Clockwise)

Preceding gene: 38233070

Following gene: 38233072

Centisome position: 17.26

GC content: 54.84

Gene sequence:

>702_bases
GTGATCACTGTAGGGCTAGTGGATGACCAGCAGCTAGTGCGGGCTGGGTTTCGTATGGTGTTGGATTCGCAAAGCGATAT
CACCGTGGCGTGGGAAGCCAACGACGGCAAAGAAGCATTAGAAAACGCCGCAAATACGCCGGTAGACGTGATTTTGATGG
ATGTGCAAATGCCGGTGATGGATGGCCTCGAAGCCACCAAACGGATCGTGGCAACCAACACCGATACCCGCATTATTGTG
TTGACCACCTTTGACAGCGAAAACTATGTGGTCGGGGCCGTAGAACACGGTGCCTCAGGATTCCTCCTAAAAGACACCGC
CCCCGAAGACCTCATCGCAGCGGTGCGTACTGTGGGAGAGCAAAGCGCTGTGATTAGCCCAGCCGCTACCGCCGTACTGT
TTAAGAGCATGCGCGGTCACGCACCGCAAACCGACCTGGTGGCAACCCCTGGCGGCGATATCAACGCAGGGCTGATTGAT
CCACTTACCCCGCGTGAACAGGAAATTCTGTTGCTTATTGCATTGGGCAAGTCTAATACCGAGATCGCCGAAGAACTGTT
TATCTCGTTGCCCACGGTAAAAACCCACGTGAGCAAGGTGCTGTCCAAAACTGGTTCCCGCGACCGAGTCCATGCGGTGC
TGTTTGCTTTTAGCAGGGGATTGGTAGCGCCCAATCAACTGCTGACTCATACCCAGGGCTGA

Upstream 100 bases:

>100_bases
CGTGCGTTGATTCATGGTGGTCGGGCGCGGTGGGGAGCGTCGATAAGCTACGTTGGGGGATGGTATGTTGAAGCGGAAAT
TCCGGTGAAAGGCTAAAACG

Downstream 100 bases:

>100_bases
TATTCCGAGGTTCCGACTGTGGTCTGATGTTTTCGCCTCCTGTGGTCGCGATGATAGACATCATGATCACAGTCCAAGAC
CTCGGAAAAACTTACGGTAA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMDGLEATKRIVATNTDTRIIV
LTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLID
PLTPREQEILLLIALGKSNTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTHTQG

Sequences:

>Translated_233_residues
MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMDGLEATKRIVATNTDTRIIV
LTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLID
PLTPREQEILLLIALGKSNTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTHTQG
>Mature_233_residues
MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMDGLEATKRIVATNTDTRIIV
LTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLID
PLTPREQEILLLIALGKSNTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTHTQG

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787473, Length=213, Percent_Identity=38.4976525821596, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1788222, Length=223, Percent_Identity=32.2869955156951, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1788521, Length=221, Percent_Identity=35.2941176470588, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790102, Length=205, Percent_Identity=33.6585365853659, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786747, Length=215, Percent_Identity=26.5116279069767, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24852; Mature: 24852

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM
CEEEEECCHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCHH
DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE
HHHHHHHEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCCC
QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT
CCEEECHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH
EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTHTQG
HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVM
CEEEEECCHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCHH
DGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGE
HHHHHHHEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCCC
QSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNT
CCEEECHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH
EIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQLLTHTQG
HHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]