| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38232953
Identifier: 38232953
GI number: 38232953
Start: 302520
End: 304046
Strand: Reverse
Name: 38232953
Synonym: DIP0332
Alternate gene names: NA
Gene position: 304046-302520 (Counterclockwise)
Preceding gene: 38232957
Following gene: 38232951
Centisome position: 12.22
GC content: 57.89
Gene sequence:
>1527_bases ATGACCAAACTATGGCGCGCCTTCAAGTGGCTGTTTAAGACTTCGTGGCCGTTATACGCAACCACGGTATTGGGCTCCAA TGTGTTGGGCGCGGTGGGGGTCATGTTGTTCCTGAAGTACTTGGTGCCGCTGCCAGAGTTCGACCAGTTCACCGATGAGG CCAGCTACCTACCTGAGCTGGGCATTGGTTATTTGATCCTGGCGGTTATTTTTGGTGGCGCGGTCACCTTTTTGCTGTTT CGTCCGGTGTTGGACTGGCAGCGCCATCCGGATACGCATGATCCAAACATGGTTCGTAATTTGGTGATGCGTATCCCGAT CTACCAGGCGGCGTTGTGCAGCGTGGTGTGGGCGCTGGGCATTGTGGTGTTGGCGATTGCCGCTGGGCAGACTTCGCCAC GCTTGGCGTTGGCCATTGCGGTGGCTTCGACGCTTAGTGGTGCTGTGATCGTGGTGCTCACCTACTTGGAGGCGCAACGG TTGGTGCGGCCGGTGGCGGCAACGGCGTTGGCTCGTCGTTTTGAGGATTCCACGTTGGAGCCGCCGATTACGTCGCGTCT GCGACTCACATGGGCGTTGACTAGCGCGGTTCCGATCATTGGCATTTTGTTGATGGTGATGGGCCACCACTTAGGCATGT TTACAGATAATGTCAGCGACATTATGCCTGCGGTCATTGCGTTGGCTATGGCCGCGCTCATTACCGGATTTTTGGGCACC ACTCTTTCGATCATGAGTGTGGTGGATCCGATTTTGGAGCTGCAGGGGGCGATCAATCGGGTGCGTCGCGGGGATTCGGG TGTCCAGGTGGACATTTACGACGGCTCCGAGATCGGTGTGCTTCAGGCCGGCTTCAATGAGATGATGCGCGGTTTGAAGG AGCGCCAGCGTGTGCGCGATATTTTCGGCCGCTATGTGGGTGTAGAGGTTGCCCGGCGCGCTTTGGAGGAGCGTCCGCAA CTAGGCGGCGAGGATCGTGAGGTTGCCGTTGTGTTCGTTGACGTGATTGGTTCGACCACGTTCGCCGTCAACCATGATCC AGAAGAGGTTGTGGAGGAGCTCAATCGTTTCTTTGAGCATGTGGTGGAGGTTGTGCACCGCAACAAGGGCATTATTAATA AGTTCCAAGGCGATGCTGCGCTGGCTGTTTTTGGTGCGCCAGTCACGCTTTCCGACGCCACCGGCCACGCCCTCACCGCC GCCCGCGAGCTGCGTCAGGAGCTCATGGGCTTGCGCCTTGAGGCCGGTATTGGTGTTGCCTCTGGTCACGTGGTGGCCGG TCACATTGGTGGTCATGATCGCTTTGAGTACACGGTGATCGGTGACGCTGTGAATACTGCGGCGCGTCTGACGGAGATCG CCAAGAACACCCCTGGTCGCGTGCTCACCAACTCTGCTACGTTGCAGCGCGCCAACGAGGCGGAACAGGCTCGGTGGACG ATGATGAAGTCCGTGGAGCTGCGTGGTCGTTCTTTGATGACACAGCTTGCACGGCCTATTCGCCCAACGTTGGCGGATCG TTCCTAA
Upstream 100 bases:
>100_bases GCTCACGCCCATCTGCGCAAAGATGTCCGACCCAGTTATTTCCGTGCTCATTACTTCAATAGAGTATCGCTTGTAGTAGC CGACCGTTAAAGTAGTGGGC
Downstream 100 bases:
>100_bases TTAGTTAGCGGATTAGTTAGCGAAGGTGCCGCGTGATGTGACCAAGCATGGTCACTCGTGTTGCCACGTCGACGTCTGCG GGGGCTTGGATCTTGGCACC
Product: putative adenylate cyclase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MTKLWRAFKWLFKTSWPLYATTVLGSNVLGAVGVMLFLKYLVPLPEFDQFTDEASYLPELGIGYLILAVIFGGAVTFLLF RPVLDWQRHPDTHDPNMVRNLVMRIPIYQAALCSVVWALGIVVLAIAAGQTSPRLALAIAVASTLSGAVIVVLTYLEAQR LVRPVAATALARRFEDSTLEPPITSRLRLTWALTSAVPIIGILLMVMGHHLGMFTDNVSDIMPAVIALAMAALITGFLGT TLSIMSVVDPILELQGAINRVRRGDSGVQVDIYDGSEIGVLQAGFNEMMRGLKERQRVRDIFGRYVGVEVARRALEERPQ LGGEDREVAVVFVDVIGSTTFAVNHDPEEVVEELNRFFEHVVEVVHRNKGIINKFQGDAALAVFGAPVTLSDATGHALTA ARELRQELMGLRLEAGIGVASGHVVAGHIGGHDRFEYTVIGDAVNTAARLTEIAKNTPGRVLTNSATLQRANEAEQARWT MMKSVELRGRSLMTQLARPIRPTLADRS
Sequences:
>Translated_508_residues MTKLWRAFKWLFKTSWPLYATTVLGSNVLGAVGVMLFLKYLVPLPEFDQFTDEASYLPELGIGYLILAVIFGGAVTFLLF RPVLDWQRHPDTHDPNMVRNLVMRIPIYQAALCSVVWALGIVVLAIAAGQTSPRLALAIAVASTLSGAVIVVLTYLEAQR LVRPVAATALARRFEDSTLEPPITSRLRLTWALTSAVPIIGILLMVMGHHLGMFTDNVSDIMPAVIALAMAALITGFLGT TLSIMSVVDPILELQGAINRVRRGDSGVQVDIYDGSEIGVLQAGFNEMMRGLKERQRVRDIFGRYVGVEVARRALEERPQ LGGEDREVAVVFVDVIGSTTFAVNHDPEEVVEELNRFFEHVVEVVHRNKGIINKFQGDAALAVFGAPVTLSDATGHALTA ARELRQELMGLRLEAGIGVASGHVVAGHIGGHDRFEYTVIGDAVNTAARLTEIAKNTPGRVLTNSATLQRANEAEQARWT MMKSVELRGRSLMTQLARPIRPTLADRS >Mature_507_residues TKLWRAFKWLFKTSWPLYATTVLGSNVLGAVGVMLFLKYLVPLPEFDQFTDEASYLPELGIGYLILAVIFGGAVTFLLFR PVLDWQRHPDTHDPNMVRNLVMRIPIYQAALCSVVWALGIVVLAIAAGQTSPRLALAIAVASTLSGAVIVVLTYLEAQRL VRPVAATALARRFEDSTLEPPITSRLRLTWALTSAVPIIGILLMVMGHHLGMFTDNVSDIMPAVIALAMAALITGFLGTT LSIMSVVDPILELQGAINRVRRGDSGVQVDIYDGSEIGVLQAGFNEMMRGLKERQRVRDIFGRYVGVEVARRALEERPQL GGEDREVAVVFVDVIGSTTFAVNHDPEEVVEELNRFFEHVVEVVHRNKGIINKFQGDAALAVFGAPVTLSDATGHALTAA RELRQELMGLRLEAGIGVASGHVVAGHIGGHDRFEYTVIGDAVNTAARLTEIAKNTPGRVLTNSATLQRANEAEQARWTM MKSVELRGRSLMTQLARPIRPTLADRS
Specific function: Unknown
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: NA
Molecular weight: Translated: 55505; Mature: 55374
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: PS50885 HAMP ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLWRAFKWLFKTSWPLYATTVLGSNVLGAVGVMLFLKYLVPLPEFDQFTDEASYLPEL CCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCC GIGYLILAVIFGGAVTFLLFRPVLDWQRHPDTHDPNMVRNLVMRIPIYQAALCSVVWALG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH IVVLAIAAGQTSPRLALAIAVASTLSGAVIVVLTYLEAQRLVRPVAATALARRFEDSTLE HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPITSRLRLTWALTSAVPIIGILLMVMGHHLGMFTDNVSDIMPAVIALAMAALITGFLGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TLSIMSVVDPILELQGAINRVRRGDSGVQVDIYDGSEIGVLQAGFNEMMRGLKERQRVRD HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH IFGRYVGVEVARRALEERPQLGGEDREVAVVFVDVIGSTTFAVNHDPEEVVEELNRFFEH HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHCCEEEEECCCHHHHHHHHHHHHHH VVEVVHRNKGIINKFQGDAALAVFGAPVTLSDATGHALTAARELRQELMGLRLEAGIGVA HHHHHHCCCCCHHHCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHCEEHHCCCCEE SGHVVAGHIGGHDRFEYTVIGDAVNTAARLTEIAKNTPGRVLTNSATLQRANEAEQARWT CCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH MMKSVELRGRSLMTQLARPIRPTLADRS HHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKLWRAFKWLFKTSWPLYATTVLGSNVLGAVGVMLFLKYLVPLPEFDQFTDEASYLPEL CHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHCCCC GIGYLILAVIFGGAVTFLLFRPVLDWQRHPDTHDPNMVRNLVMRIPIYQAALCSVVWALG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH IVVLAIAAGQTSPRLALAIAVASTLSGAVIVVLTYLEAQRLVRPVAATALARRFEDSTLE HHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPITSRLRLTWALTSAVPIIGILLMVMGHHLGMFTDNVSDIMPAVIALAMAALITGFLGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TLSIMSVVDPILELQGAINRVRRGDSGVQVDIYDGSEIGVLQAGFNEMMRGLKERQRVRD HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH IFGRYVGVEVARRALEERPQLGGEDREVAVVFVDVIGSTTFAVNHDPEEVVEELNRFFEH HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHCCEEEEECCCHHHHHHHHHHHHHH VVEVVHRNKGIINKFQGDAALAVFGAPVTLSDATGHALTAARELRQELMGLRLEAGIGVA HHHHHHCCCCCHHHCCCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHCEEHHCCCCEE SGHVVAGHIGGHDRFEYTVIGDAVNTAARLTEIAKNTPGRVLTNSATLQRANEAEQARWT CCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHH MMKSVELRGRSLMTQLARPIRPTLADRS HHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]