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The map label for this gene is ybjT [H]

Identifier: 38232947

GI number: 38232947

Start: 291817

End: 293310

Strand: Reverse

Name: ybjT [H]

Synonym: DIP0326

Alternate gene names: 38232947

Gene position: 293310-291817 (Counterclockwise)

Preceding gene: 38232949

Following gene: 38232940

Centisome position: 11.79

GC content: 50.67

Gene sequence:

>1494_bases
ATGAACTCCACCATCACCCCAACGTTGAATCTGAAAGCCCAGCATGCCGAACGACGCGTCGTAGTCACGGGAGCATCAGG
CTATGTCGGTGCTCGGTTAGTAGTCGAATTACTCAGCACTGGCTTTAATGTACGTGCTACTTCACGCAGTCTCTCAAGCT
TGAAGCGCTTTCCTTGGTATGACCAAGTAGAAGCCGTTGAAGCAGACTTAAGCATATCTGAAGACGTCAATCGGCTCTTT
GAGGACGTAGATACTGTTTTCTATCTCGTTCATTCCATGAGCGGTACTCAAAACTTTGAGGAATTGGAATCAAAGATCGC
ATCCAAAGTAGCCCAAGCTGCTCACAGCAACGGGGTGCGTCAAATTATCTACCTTTCTGGCCTACATCCTCGAACAGAGC
TCGACAAATTATCCCCACACATGCGTTCACGGGAAAACGTTGCTCGCATCTTGGGCTCCACTGCTGTACCTGCAATCACG
TTCCGTGCCGCTACATTGATTGGCTCAGGTTCTGCTTCATTTGAAATGATCCGTCACCTTACCGAACGCCTCCCCATCAT
GGTGGCACCACAATGGATCAACAATAAAATTGAACCCATCAGTATCCGAGACACACTCTACTATCTCGTCAAAGCTGCCG
ACTTACCTGAACCGATCAATGAAGAATTCGATATTGGAAGCGGCCATATATATACTTTTGCGGACCTTCTGCGGATATAT
GGAAAGATCCGCGGCTTACGCCGCACCATTGTGTCCTTACCGATCCCCCTCCCCCTCGACACCCTTTCCGGACTCTGGAT
TGCAGCTATAACTCCAGCTCCGTTGAGCCTTGCACAACCGCTTGCACAATCCATGCAGGAAGATGCCATATGCAGCAACC
GTTCAATCCGCGACTATATCTCTGATCCACCGAGTGGGCTCGCCGATTATCCCACTTCAGTGCGCCGCGCGCTCCAACAA
GAAAGCATGGGGGTGCTGTCTAGTTGGGACAGCAGCTGGAAAAATCTTTCTTCCACAGATCATCTTCCTTCTGATCCGGA
ATGGACAGGGCGTACCGTTTATAGCGACGTTCAGGAACAAAGTTTTCGTTCAGAGCCAGCTAAAGTGTGGCGAGTAATTG
AGGGCATCGGCGGACACCATGGTTGGTATTCCACACCGCTGCTCTGGTTTGTACGTGGTGTTATTGATAAGGCTATCGGC
GGACCGGGCTTAGGAGGGCGCCGCGACCCCAACCGACTACGAGTTGGCGACCGCGTAGATTTTTGGCGAGTCGAGGAAGT
CACCCCTGAAAAACAACTCACTCTCCGTGCAGAAATGAGAGCATCTGGGCAAGCTTGGCTACAGTTCACCATAAACGGCA
ATACACTACGACAGCGGGCGGTTTATTTCCCCAAAGGACTGCTTGGCAGAGTGTACTGGCTAGCGCTTATTCCTTTCCAT
GCCGTGATATTTCCCACCATGTTGCGCAACATTATTCAGGCTGGTGATAACTAG

Upstream 100 bases:

>100_bases
GTTGGCTCCTTATAGTACGGGTCTACTACGCACTTTTGTCCAACTCGGGTACTCAAGTGGGGGAAGCATGCCATGTTTTT
GGTACGTACACTGTCCAATT

Downstream 100 bases:

>100_bases
ACGCTTCTCGACGCCCCACGCTGTCCGTAGTCACCGCAGCCACAACCCCTAGGGCCACCAAGCACAACATCGGACCAATG
GCCATCCACGGGGCACGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MNSTITPTLNLKAQHAERRVVVTGASGYVGARLVVELLSTGFNVRATSRSLSSLKRFPWYDQVEAVEADLSISEDVNRLF
EDVDTVFYLVHSMSGTQNFEELESKIASKVAQAAHSNGVRQIIYLSGLHPRTELDKLSPHMRSRENVARILGSTAVPAIT
FRAATLIGSGSASFEMIRHLTERLPIMVAPQWINNKIEPISIRDTLYYLVKAADLPEPINEEFDIGSGHIYTFADLLRIY
GKIRGLRRTIVSLPIPLPLDTLSGLWIAAITPAPLSLAQPLAQSMQEDAICSNRSIRDYISDPPSGLADYPTSVRRALQQ
ESMGVLSSWDSSWKNLSSTDHLPSDPEWTGRTVYSDVQEQSFRSEPAKVWRVIEGIGGHHGWYSTPLLWFVRGVIDKAIG
GPGLGGRRDPNRLRVGDRVDFWRVEEVTPEKQLTLRAEMRASGQAWLQFTINGNTLRQRAVYFPKGLLGRVYWLALIPFH
AVIFPTMLRNIIQAGDN

Sequences:

>Translated_497_residues
MNSTITPTLNLKAQHAERRVVVTGASGYVGARLVVELLSTGFNVRATSRSLSSLKRFPWYDQVEAVEADLSISEDVNRLF
EDVDTVFYLVHSMSGTQNFEELESKIASKVAQAAHSNGVRQIIYLSGLHPRTELDKLSPHMRSRENVARILGSTAVPAIT
FRAATLIGSGSASFEMIRHLTERLPIMVAPQWINNKIEPISIRDTLYYLVKAADLPEPINEEFDIGSGHIYTFADLLRIY
GKIRGLRRTIVSLPIPLPLDTLSGLWIAAITPAPLSLAQPLAQSMQEDAICSNRSIRDYISDPPSGLADYPTSVRRALQQ
ESMGVLSSWDSSWKNLSSTDHLPSDPEWTGRTVYSDVQEQSFRSEPAKVWRVIEGIGGHHGWYSTPLLWFVRGVIDKAIG
GPGLGGRRDPNRLRVGDRVDFWRVEEVTPEKQLTLRAEMRASGQAWLQFTINGNTLRQRAVYFPKGLLGRVYWLALIPFH
AVIFPTMLRNIIQAGDN
>Mature_497_residues
MNSTITPTLNLKAQHAERRVVVTGASGYVGARLVVELLSTGFNVRATSRSLSSLKRFPWYDQVEAVEADLSISEDVNRLF
EDVDTVFYLVHSMSGTQNFEELESKIASKVAQAAHSNGVRQIIYLSGLHPRTELDKLSPHMRSRENVARILGSTAVPAIT
FRAATLIGSGSASFEMIRHLTERLPIMVAPQWINNKIEPISIRDTLYYLVKAADLPEPINEEFDIGSGHIYTFADLLRIY
GKIRGLRRTIVSLPIPLPLDTLSGLWIAAITPAPLSLAQPLAQSMQEDAICSNRSIRDYISDPPSGLADYPTSVRRALQQ
ESMGVLSSWDSSWKNLSSTDHLPSDPEWTGRTVYSDVQEQSFRSEPAKVWRVIEGIGGHHGWYSTPLLWFVRGVIDKAIG
GPGLGGRRDPNRLRVGDRVDFWRVEEVTPEKQLTLRAEMRASGQAWLQFTINGNTLRQRAVYFPKGLLGRVYWLALIPFH
AVIFPTMLRNIIQAGDN

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=486, Percent_Identity=31.4814814814815, Blast_Score=239, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 55501; Mature: 55501

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTITPTLNLKAQHAERRVVVTGASGYVGARLVVELLSTGFNVRATSRSLSSLKRFPWY
CCCCCCCEECCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCC
DQVEAVEADLSISEDVNRLFEDVDTVFYLVHSMSGTQNFEELESKIASKVAQAAHSNGVR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCE
QIIYLSGLHPRTELDKLSPHMRSRENVARILGSTAVPAITFRAATLIGSGSASFEMIRHL
EEEEECCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
TERLPIMVAPQWINNKIEPISIRDTLYYLVKAADLPEPINEEFDIGSGHIYTFADLLRIY
HHHCCEEECCHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GKIRGLRRTIVSLPIPLPLDTLSGLWIAAITPAPLSLAQPLAQSMQEDAICSNRSIRDYI
HHHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
SDPPSGLADYPTSVRRALQQESMGVLSSWDSSWKNLSSTDHLPSDPEWTGRTVYSDVQEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
SFRSEPAKVWRVIEGIGGHHGWYSTPLLWFVRGVIDKAIGGPGLGGRRDPNRLRVGDRVD
HHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
FWRVEEVTPEKQLTLRAEMRASGQAWLQFTINGNTLRQRAVYFPKGLLGRVYWLALIPFH
CEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHH
AVIFPTMLRNIIQAGDN
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSTITPTLNLKAQHAERRVVVTGASGYVGARLVVELLSTGFNVRATSRSLSSLKRFPWY
CCCCCCCEECCEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCC
DQVEAVEADLSISEDVNRLFEDVDTVFYLVHSMSGTQNFEELESKIASKVAQAAHSNGVR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCE
QIIYLSGLHPRTELDKLSPHMRSRENVARILGSTAVPAITFRAATLIGSGSASFEMIRHL
EEEEECCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
TERLPIMVAPQWINNKIEPISIRDTLYYLVKAADLPEPINEEFDIGSGHIYTFADLLRIY
HHHCCEEECCHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
GKIRGLRRTIVSLPIPLPLDTLSGLWIAAITPAPLSLAQPLAQSMQEDAICSNRSIRDYI
HHHHHHHHHHHHCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
SDPPSGLADYPTSVRRALQQESMGVLSSWDSSWKNLSSTDHLPSDPEWTGRTVYSDVQEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
SFRSEPAKVWRVIEGIGGHHGWYSTPLLWFVRGVIDKAIGGPGLGGRRDPNRLRVGDRVD
HHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCC
FWRVEEVTPEKQLTLRAEMRASGQAWLQFTINGNTLRQRAVYFPKGLLGRVYWLALIPFH
CEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHH
AVIFPTMLRNIIQAGDN
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]