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The map label for this gene is hofB [C]

Identifier: 38232934

GI number: 38232934

Start: 279821

End: 280918

Strand: Direct

Name: hofB [C]

Synonym: DIP0313

Alternate gene names: 38232934

Gene position: 279821-280918 (Clockwise)

Preceding gene: 38232933

Following gene: 38232935

Centisome position: 11.24

GC content: 57.83

Gene sequence:

>1098_bases
ATGGGTGACCAGCGGCAACGCATTGCAGAAGAAGTACAACGCTATGTGGCAGAGCATCCCGATGTGGCAGCGGGAACCTC
GTTGGCCCAGGTGGTGCGGCGTTATGCCGGTGGCGTGATCGGTGACGTGGAGGTCCTTGAGATCTTGCGTCAAATCCGCC
ACGACTCTGTCGGCGTTGGCCCCTTGGAACACATACTAGCGATTCCAGGGGTGACCGACATTGTGGTCAACGGTGTTCAC
GGTGTGTGGTTCGATCGCGGCCGTGGTTTGGAACAAGCGGCACCATGTTTTGATGATGAGGGGGAAGTAATGCGACTGGC
GACGCGGCTACTTGTGGCATCTGGGAACCGATTAGATAGCGCACAATGTTATTCCGATGGCCGCATTACACGTGACGACG
GCAGCAGTCTTCGCGTCCATGCCGTCCTTTCGCCGCCATCAGAATCAGGTCCACTGATTTCTATTCGCGTGCTACGCCAA
GCAGATGTGAGCATGACGGATCTTATAGCGCACAATACTTTTACAGCGGAGGTGGCACAGATTCTAGAAAACCTGGTGCG
CGAACGACGCCCGTTGCTGATCGTGGGTGGAACCGGTAGCGGGAAAACCACATTGCTCAGCGCGCTGCTAGCCACCGTGG
CTCACGACCAGCGCATTATCTGCATCGAAGATACTCCAGAGTTGCAGCCGGTGCATCCGCACGTGGTCAAGCTGATCTCA
AGGTCGAGTAACACCGAAGGCCGTGGCCACATCACCATGACTGACCTGCTGCGCCAAGCGCTGCGCATGCGTCCAGACCG
CATTGTTGTCGGCGAGATTCGCGGTGCAGAAGTTGTAGACCTGCTGGCGGCACTCAACACGGGCCATGATGGTTGTGCGG
GCACCTTGCATGCCAACTCCTTGCGGGAAGTTCCCGCGCGTTTGGAAGCCCTTGCCGCCGTGGGTGGATTGGATAGAAAC
GCACTGCATTCTCAACTTGCCGCGGCACGTCCCGTGGTGATCGTCGTGCGGTCCACACCGCAGGGGCGACGGTTGCATCA
AATCGGTGAACTAAGCGGTACCCCAATAACGCCACATGTGATCTGGGAGGAAGCATGA

Upstream 100 bases:

>100_bases
CCAACCGTCAAGGGGTTGCCGCGCGAGGTGGAGCTTGGCGGAATGGCCACAATACCGCGGGCGTTACGACGCCCCCTCGC
ACAACTGAGGAGTCACATCG

Downstream 100 bases:

>100_bases
GCATGTCTTTCTTCTTATGCGCGTTGGCCTGCGTTGTTCCTAGTGTGCGCTGGAAACCCATTGTGTGCAATAAAATAGTG
AGCCTTGCAGCTCTCGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MGDQRQRIAEEVQRYVAEHPDVAAGTSLAQVVRRYAGGVIGDVEVLEILRQIRHDSVGVGPLEHILAIPGVTDIVVNGVH
GVWFDRGRGLEQAAPCFDDEGEVMRLATRLLVASGNRLDSAQCYSDGRITRDDGSSLRVHAVLSPPSESGPLISIRVLRQ
ADVSMTDLIAHNTFTAEVAQILENLVRERRPLLIVGGTGSGKTTLLSALLATVAHDQRIICIEDTPELQPVHPHVVKLIS
RSSNTEGRGHITMTDLLRQALRMRPDRIVVGEIRGAEVVDLLAALNTGHDGCAGTLHANSLREVPARLEALAAVGGLDRN
ALHSQLAAARPVVIVVRSTPQGRRLHQIGELSGTPITPHVIWEEA

Sequences:

>Translated_365_residues
MGDQRQRIAEEVQRYVAEHPDVAAGTSLAQVVRRYAGGVIGDVEVLEILRQIRHDSVGVGPLEHILAIPGVTDIVVNGVH
GVWFDRGRGLEQAAPCFDDEGEVMRLATRLLVASGNRLDSAQCYSDGRITRDDGSSLRVHAVLSPPSESGPLISIRVLRQ
ADVSMTDLIAHNTFTAEVAQILENLVRERRPLLIVGGTGSGKTTLLSALLATVAHDQRIICIEDTPELQPVHPHVVKLIS
RSSNTEGRGHITMTDLLRQALRMRPDRIVVGEIRGAEVVDLLAALNTGHDGCAGTLHANSLREVPARLEALAAVGGLDRN
ALHSQLAAARPVVIVVRSTPQGRRLHQIGELSGTPITPHVIWEEA
>Mature_364_residues
GDQRQRIAEEVQRYVAEHPDVAAGTSLAQVVRRYAGGVIGDVEVLEILRQIRHDSVGVGPLEHILAIPGVTDIVVNGVHG
VWFDRGRGLEQAAPCFDDEGEVMRLATRLLVASGNRLDSAQCYSDGRITRDDGSSLRVHAVLSPPSESGPLISIRVLRQA
DVSMTDLIAHNTFTAEVAQILENLVRERRPLLIVGGTGSGKTTLLSALLATVAHDQRIICIEDTPELQPVHPHVVKLISR
SSNTEGRGHITMTDLLRQALRMRPDRIVVGEIRGAEVVDLLAALNTGHDGCAGTLHANSLREVPARLEALAAVGGLDRNA
LHSQLAAARPVVIVVRSTPQGRRLHQIGELSGTPITPHVIWEEA

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=260, Percent_Identity=28.8461538461538, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 39373; Mature: 39241

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00778 HIS_ACID_PHOSPHAT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDQRQRIAEEVQRYVAEHPDVAAGTSLAQVVRRYAGGVIGDVEVLEILRQIRHDSVGVG
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
PLEHILAIPGVTDIVVNGVHGVWFDRGRGLEQAAPCFDDEGEVMRLATRLLVASGNRLDS
HHHHHHHCCCHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
AQCYSDGRITRDDGSSLRVHAVLSPPSESGPLISIRVLRQADVSMTDLIAHNTFTAEVAQ
HHHCCCCCEECCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCHHHHHHCCCHHHHHHH
ILENLVRERRPLLIVGGTGSGKTTLLSALLATVAHDQRIICIEDTPELQPVHPHVVKLIS
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
RSSNTEGRGHITMTDLLRQALRMRPDRIVVGEIRGAEVVDLLAALNTGHDGCAGTLHANS
CCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEECCCHHH
LREVPARLEALAAVGGLDRNALHSQLAAARPVVIVVRSTPQGRRLHQIGELSGTPITPHV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCEE
IWEEA
EEECC
>Mature Secondary Structure 
GDQRQRIAEEVQRYVAEHPDVAAGTSLAQVVRRYAGGVIGDVEVLEILRQIRHDSVGVG
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC
PLEHILAIPGVTDIVVNGVHGVWFDRGRGLEQAAPCFDDEGEVMRLATRLLVASGNRLDS
HHHHHHHCCCHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC
AQCYSDGRITRDDGSSLRVHAVLSPPSESGPLISIRVLRQADVSMTDLIAHNTFTAEVAQ
HHHCCCCCEECCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCHHHHHHCCCHHHHHHH
ILENLVRERRPLLIVGGTGSGKTTLLSALLATVAHDQRIICIEDTPELQPVHPHVVKLIS
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
RSSNTEGRGHITMTDLLRQALRMRPDRIVVGEIRGAEVVDLLAALNTGHDGCAGTLHANS
CCCCCCCCCCEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEECCCHHH
LREVPARLEALAAVGGLDRNALHSQLAAARPVVIVVRSTPQGRRLHQIGELSGTPITPHV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCCCEE
IWEEA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]