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The map label for this gene is 38232935

Identifier: 38232935

GI number: 38232935

Start: 280915

End: 281661

Strand: Direct

Name: 38232935

Synonym: DIP0314

Alternate gene names: NA

Gene position: 280915-281661 (Clockwise)

Preceding gene: 38232934

Following gene: 38232936

Centisome position: 11.29

GC content: 56.89

Gene sequence:

>747_bases
ATGAGCATGTCTTTCTTCTTATGCGCGTTGGCCTGCGTTGTTCCTAGTGTGCGCTGGAAACCCATTGTGTGCAATAAAAT
AGTGAGCCTTGCAGCTCTCGTGTTACTGCCCATCATGCTGGTGATCTGGGAGCCGGTTATGATCGCAGCAGTTCTTATCA
CTGCAACGGTGATACGCACCGTGATGGGAATTCGGCGCAACCGGGCAGATCGTACCACCCAAGAAGCACTGAGCAGCGCA
CTTGGCATCATCGCCGGTGATCTACGCTGCGGGCTCGGCACCTGGGATGCGCTAGCGCGGGTAGCCCAAGAACCCACAAC
GCATGCACCTCTTGCAGCCGCGTGCGCTGCGGCTGCTCGACGTGCACGCGCTGGCGGATCAGCCGCCGACGTTCTAGCCG
ACTATTCTCACAGCATTGCAGGCCTCCAGCGGGTCGCTAGGGTATGGAAGCTATCAGAAACCCACGGTATTAGCGTGGCG
CCTCTCGTAGAACAGCTCCACAATGAAATCGATGACCGCCTGCGGCACCGAGATCGCACCAAAGCAGCACTTCAAGGAGC
ACAAGCAACCGCAATTGTGCTGAGTCTCCTGCCACTTTTTGGGCTAGGAATGGGCATCGGCCTAGGCGCACCCGTCCTAG
CATTCTTGCTTAACAACGCCATAGGCCAAACCTTGCTCATCGTAGGAACAGCATTGCAATGTGCGGGACTGCTCTGGTCG
CAAGCCTTAATCAAGGCGGTGGGATAA

Upstream 100 bases:

>100_bases
TGGTGATCGTCGTGCGGTCCACACCGCAGGGGCGACGGTTGCATCAAATCGGTGAACTAAGCGGTACCCCAATAACGCCA
CATGTGATCTGGGAGGAAGC

Downstream 100 bases:

>100_bases
TGCTATCGCTTAGCGCATTCATCCTCGCAACAGCAATTTTCCTCACCAACCCACCACCGCGAATGAGCGCCGACACCAAG
CTGGCACTGCCATCGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB-Like Protein; Conserved Membrane Protein; Type II Secretion System Protein F; Type II Secretion System Integral Membrane Subunit; Conserved Transmembrane Protein

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSMSFFLCALACVVPSVRWKPIVCNKIVSLAALVLLPIMLVIWEPVMIAAVLITATVIRTVMGIRRNRADRTTQEALSSA
LGIIAGDLRCGLGTWDALARVAQEPTTHAPLAAACAAAARRARAGGSAADVLADYSHSIAGLQRVARVWKLSETHGISVA
PLVEQLHNEIDDRLRHRDRTKAALQGAQATAIVLSLLPLFGLGMGIGLGAPVLAFLLNNAIGQTLLIVGTALQCAGLLWS
QALIKAVG

Sequences:

>Translated_248_residues
MSMSFFLCALACVVPSVRWKPIVCNKIVSLAALVLLPIMLVIWEPVMIAAVLITATVIRTVMGIRRNRADRTTQEALSSA
LGIIAGDLRCGLGTWDALARVAQEPTTHAPLAAACAAAARRARAGGSAADVLADYSHSIAGLQRVARVWKLSETHGISVA
PLVEQLHNEIDDRLRHRDRTKAALQGAQATAIVLSLLPLFGLGMGIGLGAPVLAFLLNNAIGQTLLIVGTALQCAGLLWS
QALIKAVG
>Mature_247_residues
SMSFFLCALACVVPSVRWKPIVCNKIVSLAALVLLPIMLVIWEPVMIAAVLITATVIRTVMGIRRNRADRTTQEALSSAL
GIIAGDLRCGLGTWDALARVAQEPTTHAPLAAACAAAARRARAGGSAADVLADYSHSIAGLQRVARVWKLSETHGISVAP
LVEQLHNEIDDRLRHRDRTKAALQGAQATAIVLSLLPLFGLGMGIGLGAPVLAFLLNNAIGQTLLIVGTALQCAGLLWSQ
ALIKAVG

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26090; Mature: 25959

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCC
>Mature Secondary Structure 
SMSFFLCALACVVPSVRWKPIVCNKIVSLAALVLLPIMLVIWEPVMIAAVLITATVIRT
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMGIRRNRADRTTQEALSSALGIIAGDLRCGLGTWDALARVAQEPTTHAPLAAACAAAAR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
RARAGGSAADVLADYSHSIAGLQRVARVWKLSETHGISVAPLVEQLHNEIDDRLRHRDRT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAALQGAQATAIVLSLLPLFGLGMGIGLGAPVLAFLLNNAIGQTLLIVGTALQCAGLLWS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALIKAVG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA