| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is cat [H]
Identifier: 38232902
GI number: 38232902
Start: 247748
End: 249286
Strand: Direct
Name: cat [H]
Synonym: DIP0281
Alternate gene names: 38232902
Gene position: 247748-249286 (Clockwise)
Preceding gene: 38232900
Following gene: 38232915
Centisome position: 9.96
GC content: 60.43
Gene sequence:
>1539_bases GTGACCAGCCCAGTCGATCCAATCCTGAACAAGGGCGAGCGCACCGAAGCAGCTCCTCACACCACCCGCGCCGGCGGGCA GCCCGTCGCCAGCGAAAACATCTCCATCACCGCAGGCCCACAAGGCGCCAACGTACTCAACGACCTGCACCTGATCGAAA AACTCGCACACTTTAACCGCGAGCGCGTCCCAGAGCGCAATCCACACGCCAAAGGTCACGGCGCATTCGGCGAACTCCAC ATCACCGAAGACGTATCCCAGTACACCAAGGCCAAGCTCTTCCAAAAAGGCACCGTCACCCCCATGGCCGTGCGCTTTTC TACCGTCGCCGGTGAAAAAGGCTCCCCAGACACCTGGCGCGACGTCCACGGCTTCGCACTGCGCTTTTACACCCAAGACG GCAACTACGACATCGTAGGAAACAACACCCCAACCTTCTTCCTACGCGACGCCATGAAGTTCCCCGACTTCATCCACTCC CAGAAGCGCCTCGGCTCCAGCGGCCTGCGCGATGCTGACATGCAATGGGACTTCTGGACCCGCACCCCAGAATCCGCACA CCAAGTCACCTACCTCATGGGCGACCGCGGCACACCAAAAACCAGCCGCCACCAGGACGGATTTGGCTCTCACACCTACC AGTGGATCAACGAAGACGGCCAGCCAGTGTGGGTGAAGTACCACTTTAAGACCCGCCAGGGCTGGGAAACCTTCACCGAC GCAGAGGCCCAAGAAATGGCCGGCAAGAACGCCGACTACCAGCGCGAAGACCTCTACAATGCCATCGAGCGCGGCGACTT CCCCATCTGGGACGTCAAAGTCCAGATCATGCCATTCGACGAGGCCGAAACCTACCGCTGGAACCCCTTCGACCTGACCA AGACCTGGTCCCAGAAGGACTACCCGCTTATCGACGTCGGCTACTTCGTGCTCAACCGCAACCCACAGAACTTCTTCGCC CAGATCGAACAGCTGGCCCTCGACCCAGCCAACCTCGTCCCAGGCGTTGGACTCTCCCCAGACCGCATGCTCATGGCCCG TGCCTTCGCCTACGCAGACGCACAACGCTACCGCATTGGCCCGAACTACCAGCAGCTGCCCATCAACCAGCCAGTGGTAC CGGTGAACACCTACCAGCACGAAGGCCCCATGGCCTACCACTTCAACCCAGCTGACGCGCCGGTGCACACACCAAACCGC TTTGGCAAGGGTGCCGGCTACCTCGACGACGGTCAAACCTCGTCCTCCGGTGCGACCTACGGTCAGGCGCAGGATCTCTA CGTCAACCCAGATCCACACGGCACCGACCTGACTCGCGCAGCCTATGTCAAGCACGCAGACGATGACGACTTCATGCAAG CCGGAATCCTCTACCGCGAGGTCTATGACGACGCAGCCAAGGAACGCTTCGTGGACAACGTGACCAATGCCATGGCAGGG GTATCCCCAGAAACCGAGGAGCGCGTCTACTGGTACTGGACCCAAGTAGACGAAAACCTCGGTGCGAAAATCCGTGAGGC ATTCGCCGCTAAGAAGTAG
Upstream 100 bases:
>100_bases AGGTAATACCTAACAAAAAAAGTTCATTGCTAGGGTTTGCTTTTTAATGTAAGCTATTAATCGACTCACATTTGATAGGA AACCCTTAAGGAGGGACATC
Downstream 100 bases:
>100_bases CAGGCAGCACCCACATTTTCTCGGGGTCGCAGTGGATGAGGACTTCGTCGCCAAGCGCGGCGAAGGCAAGCTCGTCGTCA GGCGAACAATGCAACACAAT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MTSPVDPILNKGERTEAAPHTTRAGGQPVASENISITAGPQGANVLNDLHLIEKLAHFNRERVPERNPHAKGHGAFGELH ITEDVSQYTKAKLFQKGTVTPMAVRFSTVAGEKGSPDTWRDVHGFALRFYTQDGNYDIVGNNTPTFFLRDAMKFPDFIHS QKRLGSSGLRDADMQWDFWTRTPESAHQVTYLMGDRGTPKTSRHQDGFGSHTYQWINEDGQPVWVKYHFKTRQGWETFTD AEAQEMAGKNADYQREDLYNAIERGDFPIWDVKVQIMPFDEAETYRWNPFDLTKTWSQKDYPLIDVGYFVLNRNPQNFFA QIEQLALDPANLVPGVGLSPDRMLMARAFAYADAQRYRIGPNYQQLPINQPVVPVNTYQHEGPMAYHFNPADAPVHTPNR FGKGAGYLDDGQTSSSGATYGQAQDLYVNPDPHGTDLTRAAYVKHADDDDFMQAGILYREVYDDAAKERFVDNVTNAMAG VSPETEERVYWYWTQVDENLGAKIREAFAAKK
Sequences:
>Translated_512_residues MTSPVDPILNKGERTEAAPHTTRAGGQPVASENISITAGPQGANVLNDLHLIEKLAHFNRERVPERNPHAKGHGAFGELH ITEDVSQYTKAKLFQKGTVTPMAVRFSTVAGEKGSPDTWRDVHGFALRFYTQDGNYDIVGNNTPTFFLRDAMKFPDFIHS QKRLGSSGLRDADMQWDFWTRTPESAHQVTYLMGDRGTPKTSRHQDGFGSHTYQWINEDGQPVWVKYHFKTRQGWETFTD AEAQEMAGKNADYQREDLYNAIERGDFPIWDVKVQIMPFDEAETYRWNPFDLTKTWSQKDYPLIDVGYFVLNRNPQNFFA QIEQLALDPANLVPGVGLSPDRMLMARAFAYADAQRYRIGPNYQQLPINQPVVPVNTYQHEGPMAYHFNPADAPVHTPNR FGKGAGYLDDGQTSSSGATYGQAQDLYVNPDPHGTDLTRAAYVKHADDDDFMQAGILYREVYDDAAKERFVDNVTNAMAG VSPETEERVYWYWTQVDENLGAKIREAFAAKK >Mature_511_residues TSPVDPILNKGERTEAAPHTTRAGGQPVASENISITAGPQGANVLNDLHLIEKLAHFNRERVPERNPHAKGHGAFGELHI TEDVSQYTKAKLFQKGTVTPMAVRFSTVAGEKGSPDTWRDVHGFALRFYTQDGNYDIVGNNTPTFFLRDAMKFPDFIHSQ KRLGSSGLRDADMQWDFWTRTPESAHQVTYLMGDRGTPKTSRHQDGFGSHTYQWINEDGQPVWVKYHFKTRQGWETFTDA EAQEMAGKNADYQREDLYNAIERGDFPIWDVKVQIMPFDEAETYRWNPFDLTKTWSQKDYPLIDVGYFVLNRNPQNFFAQ IEQLALDPANLVPGVGLSPDRMLMARAFAYADAQRYRIGPNYQQLPINQPVVPVNTYQHEGPMAYHFNPADAPVHTPNRF GKGAGYLDDGQTSSSGATYGQAQDLYVNPDPHGTDLTRAAYVKHADDDDFMQAGILYREVYDDAAKERFVDNVTNAMAGV SPETEERVYWYWTQVDENLGAKIREAFAAKK
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=486, Percent_Identity=44.0329218106996, Blast_Score=435, Evalue=1e-122, Organism=Escherichia coli, GI48994891, Length=375, Percent_Identity=41.0666666666667, Blast_Score=300, Evalue=1e-82, Organism=Caenorhabditis elegans, GI71998444, Length=505, Percent_Identity=42.3762376237624, Blast_Score=423, Evalue=1e-118, Organism=Caenorhabditis elegans, GI25147792, Length=512, Percent_Identity=41.6015625, Blast_Score=413, Evalue=1e-115, Organism=Caenorhabditis elegans, GI25151141, Length=497, Percent_Identity=42.2535211267606, Blast_Score=413, Evalue=1e-115, Organism=Saccharomyces cerevisiae, GI6320462, Length=501, Percent_Identity=41.5169660678643, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6321525, Length=510, Percent_Identity=38.4313725490196, Blast_Score=334, Evalue=2e-92, Organism=Drosophila melanogaster, GI17981717, Length=504, Percent_Identity=44.047619047619, Blast_Score=438, Evalue=1e-123, Organism=Drosophila melanogaster, GI19920968, Length=500, Percent_Identity=39.8, Blast_Score=386, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 57952; Mature: 57820
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00437 CATALASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPVDPILNKGERTEAAPHTTRAGGQPVASENISITAGPQGANVLNDLHLIEKLAHFNR CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH ERVPERNPHAKGHGAFGELHITEDVSQYTKAKLFQKGTVTPMAVRFSTVAGEKGSPDTWR HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHH DVHGFALRFYTQDGNYDIVGNNTPTFFLRDAMKFPDFIHSQKRLGSSGLRDADMQWDFWT HCCEEEEEEEEECCCEEEECCCCCCEEEHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEC RTPESAHQVTYLMGDRGTPKTSRHQDGFGSHTYQWINEDGQPVWVKYHFKTRQGWETFTD CCCCCHHEEEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEEEEECCCCCCHHCC AEAQEMAGKNADYQREDLYNAIERGDFPIWDVKVQIMPFDEAETYRWNPFDLTKTWSQKD CHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCC YPLIDVGYFVLNRNPQNFFAQIEQLALDPANLVPGVGLSPDRMLMARAFAYADAQRYRIG CCEEEEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHEECC PNYQQLPINQPVVPVNTYQHEGPMAYHFNPADAPVHTPNRFGKGAGYLDDGQTSSSGATY CCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC GQAQDLYVNPDPHGTDLTRAAYVKHADDDDFMQAGILYREVYDDAAKERFVDNVTNAMAG CCCCCEEECCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VSPETEERVYWYWTQVDENLGAKIREAFAAKK CCCCCCCEEEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure TSPVDPILNKGERTEAAPHTTRAGGQPVASENISITAGPQGANVLNDLHLIEKLAHFNR CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHH ERVPERNPHAKGHGAFGELHITEDVSQYTKAKLFQKGTVTPMAVRFSTVAGEKGSPDTWR HCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHH DVHGFALRFYTQDGNYDIVGNNTPTFFLRDAMKFPDFIHSQKRLGSSGLRDADMQWDFWT HCCEEEEEEEEECCCEEEECCCCCCEEEHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEC RTPESAHQVTYLMGDRGTPKTSRHQDGFGSHTYQWINEDGQPVWVKYHFKTRQGWETFTD CCCCCHHEEEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEEEEECCCCCCHHCC AEAQEMAGKNADYQREDLYNAIERGDFPIWDVKVQIMPFDEAETYRWNPFDLTKTWSQKD CHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCC YPLIDVGYFVLNRNPQNFFAQIEQLALDPANLVPGVGLSPDRMLMARAFAYADAQRYRIG CCEEEEEEEEECCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHCCHHEECC PNYQQLPINQPVVPVNTYQHEGPMAYHFNPADAPVHTPNRFGKGAGYLDDGQTSSSGATY CCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC GQAQDLYVNPDPHGTDLTRAAYVKHADDDDFMQAGILYREVYDDAAKERFVDNVTNAMAG CCCCCEEECCCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VSPETEERVYWYWTQVDENLGAKIREAFAAKK CCCCCCCEEEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1426241; 12454454 [H]