Definition Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome.
Accession NC_002935
Length 2,488,635

Click here to switch to the map view.

The map label for this gene is 38232915

Identifier: 38232915

GI number: 38232915

Start: 262085

End: 263482

Strand: Direct

Name: 38232915

Synonym: DIP0294

Alternate gene names: NA

Gene position: 262085-263482 (Clockwise)

Preceding gene: 38232902

Following gene: 38232918

Centisome position: 10.53

GC content: 61.02

Gene sequence:

>1398_bases
ATGAGCCGAAAAATTGTCCGACGAGCCCTCGCAGGAGCCCTGTTTTTCGTGCCGCTCATTGCCGGCACCGTCTACGCCAC
AACACAAGACGTAGACCCCGCGGCCACCTGGTCCGCAGCACAAGAAACCCAACAAGGAGCCCCCGCAGTCCAAGAGGACC
CCTCACTCGTCGACATCCGGCGCGCAGCCGGCGAAGCAGGCTCCCAAGCCAGCCTCCTAAAAAACGGCACCACCCAGCTT
GTCGACGGCACCACCGCCCTCAACAACGGCGCAGCCCAACTCGGCGACGGTACCAAAGCCGCCCAAAACGGCGCAGCCCA
ACTCGCCGACGGCATGGTCAAACTCCAAGCAGCCACCGGACAAATGGGCAACGGCGCCACCGAAATCGCCAACGGCATCG
ACCAAGCAGTCGGACAATTCCAAAACGTCGAAGTCATCCGCGGACAACTACTCACCGCCATCAACCTCGCCATGAGCGAC
CCCAAACTCGCCGACGTCAAACCCGACCTCGAAGACTTCAAACGCCAAGTAGAAACCTTCAAAGTCGACGACAACATCAC
CAGCCAAATGGACAAGCTTCGCGACGGCTCCCGCGAACTCGCCAACCAACTAGCAGTACCAGGCTACAGCTTCCACGACG
GAATCTACTCCGCCACCAAAGGCTCAAAAGACCTCTCAGCAGGACTCAACGACCTCTCCGGCGGCGTAGACCAAGCACTG
ACCGGTGTCCGCGACCTCGACAACGGCGCCAAAAAAATCGACGCCATGGCCAAAGAAAACCAAACCCGCGTAGGCAACAT
CCAACGCGCACTCCCCATCACCAAAGCCGGCACCCCCGAAGCACAAGAACAAGGCGTCACCCGCACACTTGCACCACTGT
ACGCATTCCTGATCGCAGCAGGACTCATGCTCGCAGCCACCGCCTACCTTCGCGACCGCATCTGGGGAACCATCGCCTTT
ATCACCCTCACACTTCTCGGCGGAGGACTGGTCTACCTACTAGGAACCGAAATCACCGCAGGGGTAGCAGCCGCAGCCGC
CGGTGTCAGTGCCCTCGCCGTTGCTGGAGCAGCACTGCTCGGCACCCTTTTGACCAGCATCTTCGGGGAGCGCACCGGCC
GTGGCCTCAGCGCCCTTGTGACCATTGCCCAAGTCGCAGTCGTTGGTTTCGTATGGAACTCCGCCGCCAACTCCGCCTTG
AGCAGCGCCGCAAAAGCACTGGTCAACTTCATGCCGCTGCACTATCCCACCTTGGCGCTCAGCTCCATCGGTAACGCTGG
CGATACCACGACCACAGCACTCGGCGTGGGCGTGACCGCAGCCTGCGCAGTGTGTGCGGCGGCCGGCGTGATGATTCTGC
GCAAAAAAGAGGAGCAAACGCTGCCAACGGCGGAGTAA

Upstream 100 bases:

>100_bases
TACCAGTGTTGAGCGTGAACTTAATGGTCGAAAAACTTTAACCGGCTTTTCGGTGAGTCAAAAACCACAGACCTATACCT
ATTAATTAAGTTGGACAACT

Downstream 100 bases:

>100_bases
CTTTGTAACTTAGTAACTTTTCGCGACCACGAACTCAAGAGTTCGAAAACCCAAGGAAGAGCTGACGTGGGTGAGATCAG
CGTCCTTGGGTTTTTGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MSRKIVRRALAGALFFVPLIAGTVYATTQDVDPAATWSAAQETQQGAPAVQEDPSLVDIRRAAGEAGSQASLLKNGTTQL
VDGTTALNNGAAQLGDGTKAAQNGAAQLADGMVKLQAATGQMGNGATEIANGIDQAVGQFQNVEVIRGQLLTAINLAMSD
PKLADVKPDLEDFKRQVETFKVDDNITSQMDKLRDGSRELANQLAVPGYSFHDGIYSATKGSKDLSAGLNDLSGGVDQAL
TGVRDLDNGAKKIDAMAKENQTRVGNIQRALPITKAGTPEAQEQGVTRTLAPLYAFLIAAGLMLAATAYLRDRIWGTIAF
ITLTLLGGGLVYLLGTEITAGVAAAAAGVSALAVAGAALLGTLLTSIFGERTGRGLSALVTIAQVAVVGFVWNSAANSAL
SSAAKALVNFMPLHYPTLALSSIGNAGDTTTTALGVGVTAACAVCAAAGVMILRKKEEQTLPTAE

Sequences:

>Translated_465_residues
MSRKIVRRALAGALFFVPLIAGTVYATTQDVDPAATWSAAQETQQGAPAVQEDPSLVDIRRAAGEAGSQASLLKNGTTQL
VDGTTALNNGAAQLGDGTKAAQNGAAQLADGMVKLQAATGQMGNGATEIANGIDQAVGQFQNVEVIRGQLLTAINLAMSD
PKLADVKPDLEDFKRQVETFKVDDNITSQMDKLRDGSRELANQLAVPGYSFHDGIYSATKGSKDLSAGLNDLSGGVDQAL
TGVRDLDNGAKKIDAMAKENQTRVGNIQRALPITKAGTPEAQEQGVTRTLAPLYAFLIAAGLMLAATAYLRDRIWGTIAF
ITLTLLGGGLVYLLGTEITAGVAAAAAGVSALAVAGAALLGTLLTSIFGERTGRGLSALVTIAQVAVVGFVWNSAANSAL
SSAAKALVNFMPLHYPTLALSSIGNAGDTTTTALGVGVTAACAVCAAAGVMILRKKEEQTLPTAE
>Mature_464_residues
SRKIVRRALAGALFFVPLIAGTVYATTQDVDPAATWSAAQETQQGAPAVQEDPSLVDIRRAAGEAGSQASLLKNGTTQLV
DGTTALNNGAAQLGDGTKAAQNGAAQLADGMVKLQAATGQMGNGATEIANGIDQAVGQFQNVEVIRGQLLTAINLAMSDP
KLADVKPDLEDFKRQVETFKVDDNITSQMDKLRDGSRELANQLAVPGYSFHDGIYSATKGSKDLSAGLNDLSGGVDQALT
GVRDLDNGAKKIDAMAKENQTRVGNIQRALPITKAGTPEAQEQGVTRTLAPLYAFLIAAGLMLAATAYLRDRIWGTIAFI
TLTLLGGGLVYLLGTEITAGVAAAAAGVSALAVAGAALLGTLLTSIFGERTGRGLSALVTIAQVAVVGFVWNSAANSALS
SAAKALVNFMPLHYPTLALSSIGNAGDTTTTALGVGVTAACAVCAAAGVMILRKKEEQTLPTAE

Specific function: Unknown

COG id: COG1511

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47683; Mature: 47552

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKIVRRALAGALFFVPLIAGTVYATTQDVDPAATWSAAQETQQGAPAVQEDPSLVDIR
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
RAAGEAGSQASLLKNGTTQLVDGTTALNNGAAQLGDGTKAAQNGAAQLADGMVKLQAATG
HHHCCCCCHHHHHHCCCHHHCCCCHHHCCCCHHCCCCCHHHHCCHHHHHHHHHEEEHHCC
QMGNGATEIANGIDQAVGQFQNVEVIRGQLLTAINLAMSDPKLADVKPDLEDFKRQVETF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHE
KVDDNITSQMDKLRDGSRELANQLAVPGYSFHDGIYSATKGSKDLSAGLNDLSGGVDQAL
ECCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCHHHCCCCHHHHHCHHHHCCCHHHHH
TGVRDLDNGAKKIDAMAKENQTRVGNIQRALPITKAGTPEAQEQGVTRTLAPLYAFLIAA
HHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
GLMLAATAYLRDRIWGTIAFITLTLLGGGLVYLLGTEITAGVAAAAAGVSALAVAGAALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLLTSIFGERTGRGLSALVTIAQVAVVGFVWNSAANSALSSAAKALVNFMPLHYPTLAL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SSIGNAGDTTTTALGVGVTAACAVCAAAGVMILRKKEEQTLPTAE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure 
SRKIVRRALAGALFFVPLIAGTVYATTQDVDPAATWSAAQETQQGAPAVQEDPSLVDIR
CHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH
RAAGEAGSQASLLKNGTTQLVDGTTALNNGAAQLGDGTKAAQNGAAQLADGMVKLQAATG
HHHCCCCCHHHHHHCCCHHHCCCCHHHCCCCHHCCCCCHHHHCCHHHHHHHHHEEEHHCC
QMGNGATEIANGIDQAVGQFQNVEVIRGQLLTAINLAMSDPKLADVKPDLEDFKRQVETF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHE
KVDDNITSQMDKLRDGSRELANQLAVPGYSFHDGIYSATKGSKDLSAGLNDLSGGVDQAL
ECCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCHHHCCCCHHHHHCHHHHCCCHHHHH
TGVRDLDNGAKKIDAMAKENQTRVGNIQRALPITKAGTPEAQEQGVTRTLAPLYAFLIAA
HHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
GLMLAATAYLRDRIWGTIAFITLTLLGGGLVYLLGTEITAGVAAAAAGVSALAVAGAALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
GTLLTSIFGERTGRGLSALVTIAQVAVVGFVWNSAANSALSSAAKALVNFMPLHYPTLAL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SSIGNAGDTTTTALGVGVTAACAVCAAAGVMILRKKEEQTLPTAE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA