Click here to switch to the map view.

The map label for this gene is 38232860

Identifier: 38232860

GI number: 38232860

Start: 200435

End: 201373

Strand: Direct

Name: 38232860

Synonym: DIP0236

Alternate gene names: NA

Gene position: 200435-201373 (Clockwise)

Preceding gene: 38232859

Following gene: 38232861

Centisome position: 8.05

GC content: 59.64

Gene sequence:

>939_bases
GTGGATCACACCCTCAGCACTGACGTCGAACCGGAGAAGGAACCGCGCCGTGCCAACAGCGCCAAAACCAGCCCCGTGCT
GGCCGCGGTGCTCGTGATCCTTGGGGTGCTCGTGATGCTGTACCCGGTGACGTCCACCCTGTGGAATAACCACCTAGCCA
CGAAGGCCGCGCAGGAATACGCAAAACTCGAAAAGAATGCCCCACAAGAGGTGAAGAATACCCAGTGGGAGCGTGCCCAC
GAGTACAACGAGAACCGAACAACCGGCCCCATCTTTGACCCCTGGCTCGCCCGCTTCGACGAGAACAACTCGGACTACCA
AGAATACCTGGACCAACTCGACGCGAACGACGCGATGGCGCGCCTCATCTTCCCCAAGATCAAGGCAGACCTGCCGATTT
TCCACGGGACAGATAACGACACTTTGCAAAAAGGCTTGGGGCACCTCTTCGGCTCCGACCTGCCGGTCGGCGGTAAGGGC
ATGCACTCGGTGATCACCGGCCACACGGGCCTAGCGAACTCGACCATGTTCGACCACCTCAACAAGGCGGAGAAGGGTGA
TACCTTCTATGTCCAGGTTTCCGGCGAGAAGCTGAAGTATGTGGTCGACCAGATCAAGGTTGTGCTCCCCACCGAAACCG
AGGATCTCCGCCCAGAGCAGGGCAAGGACTACATCACCCTGATCACCTGCACTCCCTACGGGATCAACACGCACCGCCTG
ATGGTGCGCGGCCACCAGGTCCCGCTGGCCCCGGAAGATCACGAGGTTTTCGACAAGAACCACGGTGCCGGGTGGCAGTG
GTGGATGTACACGCTACTCGCGGCAGCAGCTGTCGTGCTGCTCCTGCTGCTGCGGTGGCTACTGAAGAACAAGCGGGATG
GCGAATCCCAAGAAACGACAGAGATGATGAATGACGAAGGGGCTGGAGCAGATGACTAG

Upstream 100 bases:

>100_bases
TAGCCCGCTGAATCGGTAAAACTTTCGCCCAGCGGACAACCCCGCCGGCAGAGGTTTCACCCAAAGCACAGCCAAGCAGA
ACCAGCCCCAGGAGTACCCC

Downstream 100 bases:

>100_bases
CCACGCACGCGCGGTACGGACCAGCCGCAGACTTGTGGCGGCCATCGCCCTTAGCGCTGGCCTGCTCGGCGGCGCATATG
GTGCCGTCGGGGTTGCCGAC

Product: putative fimbrial associated sortase-like protein

Products: NA

Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase-Like Protein; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Sortase C Type; Sortase C; SortaseC; Fimbrial Associated Sortase Family Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
MHSVITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
MVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLLLLLRWLLKNKRDGESQETTEMMNDEGAGADD

Sequences:

>Translated_312_residues
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
MHSVITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
MVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLLLLLRWLLKNKRDGESQETTEMMNDEGAGADD
>Mature_312_residues
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEYAKLEKNAPQEVKNTQWERAH
EYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMARLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKG
MHSVITGHTGLANSTMFDHLNKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
MVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLLLLLRWLLKNKRDGESQETTEMMNDEGAGADD

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35082; Mature: 35082

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEY
CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLEKNAPQEVKNTQWERAHEYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMA
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHH
RLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKGMHSVITGHTGLANSTMFDHL
HHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHH
NKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
HHHCCCCEEEEEECCCHHHHHHHHHHEECCCCCHHCCCCCCCCEEEEEEECCCCCCCCEE
MVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLLLLLRWLLKNKRDGESQETT
EEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EMMNDEGAGADD
HHHCCCCCCCCC
>Mature Secondary Structure
MDHTLSTDVEPEKEPRRANSAKTSPVLAAVLVILGVLVMLYPVTSTLWNNHLATKAAQEY
CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLEKNAPQEVKNTQWERAHEYNENRTTGPIFDPWLARFDENNSDYQEYLDQLDANDAMA
HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHH
RLIFPKIKADLPIFHGTDNDTLQKGLGHLFGSDLPVGGKGMHSVITGHTGLANSTMFDHL
HHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHH
NKAEKGDTFYVQVSGEKLKYVVDQIKVVLPTETEDLRPEQGKDYITLITCTPYGINTHRL
HHHCCCCEEEEEECCCHHHHHHHHHHEECCCCCHHCCCCCCCCEEEEEEECCCCCCCCEE
MVRGHQVPLAPEDHEVFDKNHGAGWQWWMYTLLAAAAVVLLLLLRWLLKNKRDGESQETT
EEECCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EMMNDEGAGADD
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA