| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232861
Identifier: 38232861
GI number: 38232861
Start: 201366
End: 202157
Strand: Direct
Name: 38232861
Synonym: DIP0237
Alternate gene names: NA
Gene position: 201366-202157 (Clockwise)
Preceding gene: 38232860
Following gene: 38232862
Centisome position: 8.09
GC content: 66.67
Gene sequence:
>792_bases ATGACTAGCCACGCACGCGCGGTACGGACCAGCCGCAGACTTGTGGCGGCCATCGCCCTTAGCGCTGGCCTGCTCGGCGG CGCATATGGTGCCGTCGGGGTTGCCGACGCAGCCAAGGTAGCCGGGCTCAGTGATCAGCCCGGGGTATCCCGCGACTACG GAACCGACACGCTGAGCATCACGCTTTCCCCGGGCAATGGGGACCCGGTCAACCCTGCCACGGGCAAGGTCGCGGGCGTG ACCATCAAACTGCAGCGGCTGCAGGGCATCGACCCGGAGAACGCCGCGGATCAGGCGAAGGTCCGCAACACCAGCGCAGA CAAGATCGCTGGCTGGCCGACCGACCGCACGATCAAAGCCGTGACCAACGAGGCCGGCCAGGTCCGATTCCAGGGGCTCG AGAAGGGCATCTACCTAGTCACCTCCCAAGCACCGGCTGGTGCCGCGGCGGGAGAGTACCGGGAGATTAGCCCCTTCCTG GTGGCGGTTCCTTTCCATACTGTTGCTGATAACCCCCGGCCGGTGGAAGGCGTGATCGTGGCGAAGACGAACTCCACGGT TCCGCCGACCACCCCACCGTGGACCCCGCCGACGACGCCGTCCACCCCGCCCCCAGGGCACACCCCGCCGCTACGGGAGA CCCCCGGGTCGGGCGATGAGAAAGAACGCGAACAGGGCGACTTGGCGCTGACTGGTGTGCAGATCATCGGTCTCGTCCTC GCCGCGGTGGCGCTGATGGGCGCCGGGCTGTTGATGCTGTTGATTACGAAGAAGCGAAAGCAAGAGGGGTAG
Upstream 100 bases:
>100_bases GTCGTGCTGCTCCTGCTGCTGCGGTGGCTACTGAAGAACAAGCGGGATGGCGAATCCCAAGAAACGACAGAGATGATGAA TGACGAAGGGGCTGGAGCAG
Downstream 100 bases:
>100_bases CGAGAATGAAAACTAAGTTCATGGGTGTAGCGGCCGCGCTGACCGCCGCGCTTGCGCTGGTTTTCGGCGTCGCTGCCCCA GGCGCGCTGCCCAGCCTTCC
Product: putative surface anchored protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSDQPGVSRDYGTDTLSITLSPGNGDPVNPATGKVAGV TIKLQRLQGIDPENAADQAKVRNTSADKIAGWPTDRTIKAVTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFL VAVPFHTVADNPRPVEGVIVAKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKEREQGDLALTGVQIIGLVL AAVALMGAGLLMLLITKKRKQEG
Sequences:
>Translated_263_residues MTSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSDQPGVSRDYGTDTLSITLSPGNGDPVNPATGKVAGV TIKLQRLQGIDPENAADQAKVRNTSADKIAGWPTDRTIKAVTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFL VAVPFHTVADNPRPVEGVIVAKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKEREQGDLALTGVQIIGLVL AAVALMGAGLLMLLITKKRKQEG >Mature_262_residues TSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSDQPGVSRDYGTDTLSITLSPGNGDPVNPATGKVAGVT IKLQRLQGIDPENAADQAKVRNTSADKIAGWPTDRTIKAVTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFLV AVPFHTVADNPRPVEGVIVAKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKEREQGDLALTGVQIIGLVLA AVALMGAGLLMLLITKKRKQEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27085; Mature: 26954
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSDQPGVSRDYGTDTLSI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE TLSPGNGDPVNPATGKVAGVTIKLQRLQGIDPENAADQAKVRNTSADKIAGWPTDRTIKA EEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHCCCCCCCCHHHH VTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFLVAVPFHTVADNPRPVEGVIV HHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEEE AKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKEREQGDLALTGVQIIGLVL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHHHHHHHH AAVALMGAGLLMLLITKKRKQEG HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSHARAVRTSRRLVAAIALSAGLLGGAYGAVGVADAAKVAGLSDQPGVSRDYGTDTLSI CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEE TLSPGNGDPVNPATGKVAGVTIKLQRLQGIDPENAADQAKVRNTSADKIAGWPTDRTIKA EEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHCCCCCHHCCCCCCCCHHHH VTNEAGQVRFQGLEKGIYLVTSQAPAGAAAGEYREISPFLVAVPFHTVADNPRPVEGVIV HHCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCEEEE AKTNSTVPPTTPPWTPPTTPSTPPPGHTPPLRETPGSGDEKEREQGDLALTGVQIIGLVL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHHHHHHHH AAVALMGAGLLMLLITKKRKQEG HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA