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The map label for this gene is 38232829

Identifier: 38232829

GI number: 38232829

Start: 170723

End: 171973

Strand: Direct

Name: 38232829

Synonym: DIP0205

Alternate gene names: NA

Gene position: 170723-171973 (Clockwise)

Preceding gene: 38232828

Following gene: 38232830

Centisome position: 6.86

GC content: 53.4

Gene sequence:

>1251_bases
ATGAACCTCAAGGACCTACTCGCACACCGCGAGAATCTGATGGACAGCGCAAAGCGAGCACGCAGTGCGATCACCGACGA
TATGGACCCAGCAGACGCAGCGCAGGCGGTGGAGAACGTCAAGAGCATCATTAGCGAGATCGAATCTACTGACGAAGCTA
TTGCTGCACGTCGAGGGGTTTCTGATGTCACACAGAAGCTCAAGGGTCTGACGATCACTGAGCGTGGCACTGAGAACGAT
TCTGCAGCTTCTCGTTCCCTTGGAGAGCACTTTGTTAAGGCTGCAGGTGACCGACTCAAGAACCAAGCGGCAGGTGCGCA
TATTGAATATTCAGTTCCTGAATATCAGGTGAAGGAAGATGCTCACAGCTCCCCGAAGGATCTTGTCGAGGGATGGGGGA
CCTTCTACCAGCGTGGCATCATCAACCAGCGGCGTGAGCGGCTTGTTGCTGCTGACCTGATGGGCGCAGCGACCGTGACT
GCATCGACGGTGAAGTACATCGTGGAAAAGGCTAACCGTATTGCATCCGGTGCTCCGGCAACAGTCGCAGAAGGAACAAA
GAAGCCATATGTGAAGTATGCCGACTTCGATGTTGTCACCGAGTCACTGTCGAAGGTCGCAGCACTGGCAAAGTTCACCG
ACGAGATGATTGAGGATTACGACTTTGTCGCAAGCTGGATCAACAACAACTTGGTCTACGACCTGTCCGTTGTGGAAGAA
AAGCAGCTGATCAACGGTGATGGTCGTGGATCGAACATCAAGGGGCTGCTGAACCGAGAAGGTATCCAGACGCATAAATC
TGCAAAGCAAGCAGATTGGTTTAACGATCTGTTCAAAGCCAAGAACAAGGTGTCGCAGGCAACCAACTTGGAAGCAGACG
GCATCATGATCAACCCAGTCAACTATGAGGCGCTGCGGTTGACCAAGGACGGCAATGGCCAGTACATCGCAGGTGGACCT
TTCCAAGGACAGTATGGCAACGGCAACATCCTCATTGATCCACCTCTATGGGGAATCAAGACAGTTGTGTCCAATGCTGT
TCCAGCAGGAACCGCAATTGTCGGAGCATTCCGACAAGGAGCAACCGTCTTGCGCAAGGGTGGTGTCCGCGTCGATTCCG
CGAACACGAACGCCGATGACTTCGAGAACAATCTCGTCACGCTGCGCGCAGAGGAACGTCTCGGCCTGATGGTGCCACTC
CCAGCAGCATTCGTGAAGGTCACTCTCGAAGAAACTACAGAGGAACTCTAA

Upstream 100 bases:

>100_bases
GTCAACTAACAAAATCAATCAGCAACAAGCCTCCTAAACAGGGGGCTTTTGCTCTATCTGCGCTCGATGCGCATCTCAGC
ATATTGGAAAAGGAGAACCG

Downstream 100 bases:

>100_bases
TGCGACGCGAATACGAAGCCACAACACCATACGGGCAGAAGCTAACGCTTGAAATGAGTGAAGATTACAAGAACGCTCAT
TGGCCTGATGCCGTGCTACT

Product: putative phage capsid protein

Products: NA

Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; Head Protein; Phage Head; Phage Capsid Protein; Phage Head Protein; Prophage LambdaSo; Phage Protein; Capsid Protein HK; Serine/Arginine Repetitive Matrix; Phage Capsid Family; Phage Capsid Subunit

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIISEIESTDEAIAARRGVSDVTQKLKGLTITERGTEND
SAASRSLGEHFVKAAGDRLKNQAAGAHIEYSVPEYQVKEDAHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVT
ASTVKYIVEKANRIASGAPATVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDFVASWINNNLVYDLSVVEE
KQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAKNKVSQATNLEADGIMINPVNYEALRLTKDGNGQYIAGGP
FQGQYGNGNILIDPPLWGIKTVVSNAVPAGTAIVGAFRQGATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVPL
PAAFVKVTLEETTEEL

Sequences:

>Translated_416_residues
MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIISEIESTDEAIAARRGVSDVTQKLKGLTITERGTEND
SAASRSLGEHFVKAAGDRLKNQAAGAHIEYSVPEYQVKEDAHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVT
ASTVKYIVEKANRIASGAPATVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDFVASWINNNLVYDLSVVEE
KQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAKNKVSQATNLEADGIMINPVNYEALRLTKDGNGQYIAGGP
FQGQYGNGNILIDPPLWGIKTVVSNAVPAGTAIVGAFRQGATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVPL
PAAFVKVTLEETTEEL
>Mature_416_residues
MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIISEIESTDEAIAARRGVSDVTQKLKGLTITERGTEND
SAASRSLGEHFVKAAGDRLKNQAAGAHIEYSVPEYQVKEDAHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVT
ASTVKYIVEKANRIASGAPATVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDFVASWINNNLVYDLSVVEE
KQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAKNKVSQATNLEADGIMINPVNYEALRLTKDGNGQYIAGGP
FQGQYGNGNILIDPPLWGIKTVVSNAVPAGTAIVGAFRQGATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVPL
PAAFVKVTLEETTEEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45119; Mature: 45119

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIISEIESTDEAIAARRGV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SDVTQKLKGLTITERGTENDSAASRSLGEHFVKAAGDRLKNQAAGAHIEYSVPEYQVKED
HHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
AHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVTASTVKYIVEKANRIASGAPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDFVASWINNNLVYDLSVVEE
HHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
KQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAKNKVSQATNLEADGIMINPV
HHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
NYEALRLTKDGNGQYIAGGPFQGQYGNGNILIDPPLWGIKTVVSNAVPAGTAIVGAFRQG
CCEEEEEEECCCCCEEECCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH
ATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVPLPAAFVKVTLEETTEEL
HHHHHHCCEEEECCCCCCCHHCCCEEEEEECCCCCEEEECCHHHHEEEHHHHHCCC
>Mature Secondary Structure
MNLKDLLAHRENLMDSAKRARSAITDDMDPADAAQAVENVKSIISEIESTDEAIAARRGV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SDVTQKLKGLTITERGTENDSAASRSLGEHFVKAAGDRLKNQAAGAHIEYSVPEYQVKED
HHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
AHSSPKDLVEGWGTFYQRGIINQRRERLVAADLMGAATVTASTVKYIVEKANRIASGAPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVAEGTKKPYVKYADFDVVTESLSKVAALAKFTDEMIEDYDFVASWINNNLVYDLSVVEE
HHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHH
KQLINGDGRGSNIKGLLNREGIQTHKSAKQADWFNDLFKAKNKVSQATNLEADGIMINPV
HHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCC
NYEALRLTKDGNGQYIAGGPFQGQYGNGNILIDPPLWGIKTVVSNAVPAGTAIVGAFRQG
CCEEEEEEECCCCCEEECCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH
ATVLRKGGVRVDSANTNADDFENNLVTLRAEERLGLMVPLPAAFVKVTLEETTEEL
HHHHHHCCEEEECCCCCCCHHCCCEEEEEECCCCCEEEECCHHHHEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA