| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38232828
Identifier: 38232828
GI number: 38232828
Start: 169683
End: 170726
Strand: Direct
Name: 38232828
Synonym: DIP0204
Alternate gene names: NA
Gene position: 169683-170726 (Clockwise)
Preceding gene: 38232827
Following gene: 38232829
Centisome position: 6.82
GC content: 50.48
Gene sequence:
>1044_bases ATGACTATCCATGTCGTTATAGGCCCTCCTTGTTCTGGGAAATCAAGCTTTGTTGAGGCTAATGCTCCAGCTGGGATTGG GCGCTTCGATTTCGACAACATTGCGGGAACTGTTGCAGGGCAAGACGTTAAAAATGCATCACCGAATCCAGTTGCCAATG CCGTGTTGGCGATGCGGCGTGGGCTGATGGGGTGGCTTCTTGACGTTGAACTTGATCCACCAGAGTTTTGGTTGATTAAC GCGCAACCATCGCCAGCACTGATAGCAGCTCTGAGTGCACGTGGGGCAACGTTTCATCTTTGTGACCCAGGGATGGAGGA ATGCCTCGCACGTGCTGCCAGAGATGGGCGCCCTCAATCTGTCGAAGATCGCATTCGGCAGTGGTACGACAATCCACCTG AGCTACCTACGAAAGGAGGGCACGAAGTGAAAACGAAAAGCTATGACGTTTCGATCGACGAGACACAAACAGAGGGAACA ATCACCGCATACGCCAGCGTATTCGGAAACGTTGACTCCTACGGTGACGTTGTCATTCCAGGTGCTTTCGAAGAGACACT GGGTGAATGGCAGAAGTCAGGGAATACAATCCCGCTGTTGTATGGGCATGATTTCAAAGATCCGTTCTCGAACATCGGTG GAGTGACATCGGCTGTTGAAGATGCACACGGGCTCAAAATCACTGCGCAGCTTGACCTCGACAATCCCAAAGCGAGGCAG GTCTACAACCTGTTGAAAGCAAAACGACTCTCACAAATGAGTTTTGCCTTCGATGTTGTTGAAGGCTCGTGGGGAGAACG AGAACAGCAGGAAGTTTACGAGCTGAAAAAGGTCAAGCTCTACGAGGTTTCTGTCGTTCCAATCGGAGCGAATCAGGAGA CGAGCATCATTGATGTGAAAGCAGTGGTAGCGGAAGAACTCGCGAATATGCTCGATTCACGTCAACTAACAAAATCAATC AGCAACAAGCCTCCTAAACAGGGGGCTTTTGCTCTATCTGCGCTCGATGCGCATCTCAGCATATTGGAAAAGGAGAACCG ATGA
Upstream 100 bases:
>100_bases ACCTTCCGGCAATTGACGGTGGAGAAGATCTGATTACTCCTTTGAATGTCACTACAGAGAACAGCGAAAGCAATAACGAT GTGGGATTGGAGGAAGAATC
Downstream 100 bases:
>100_bases ACCTCAAGGACCTACTCGCACACCGCGAGAATCTGATGGACAGCGCAAAGCGAGCACGCAGTGCGATCACCGACGATATG GACCCAGCAGACGCAGCGCA
Product: putative phage prohead protease
Products: NA
Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; Phage Protein; Phage Head Maturation Protease; Prohead Protease; Phage Pro-Head Protease
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKNASPNPVANAVLAMRRGLMGWLLDVELDPPEFWLIN AQPSPALIAALSARGATFHLCDPGMEECLARAARDGRPQSVEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGT ITAYASVFGNVDSYGDVVIPGAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDAHGLKITAQLDLDNPKARQ VYNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLYEVSVVPIGANQETSIIDVKAVVAEELANMLDSRQLTKSI SNKPPKQGAFALSALDAHLSILEKENR
Sequences:
>Translated_347_residues MTIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKNASPNPVANAVLAMRRGLMGWLLDVELDPPEFWLIN AQPSPALIAALSARGATFHLCDPGMEECLARAARDGRPQSVEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGT ITAYASVFGNVDSYGDVVIPGAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDAHGLKITAQLDLDNPKARQ VYNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLYEVSVVPIGANQETSIIDVKAVVAEELANMLDSRQLTKSI SNKPPKQGAFALSALDAHLSILEKENR >Mature_346_residues TIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKNASPNPVANAVLAMRRGLMGWLLDVELDPPEFWLINA QPSPALIAALSARGATFHLCDPGMEECLARAARDGRPQSVEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGTI TAYASVFGNVDSYGDVVIPGAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDAHGLKITAQLDLDNPKARQV YNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLYEVSVVPIGANQETSIIDVKAVVAEELANMLDSRQLTKSIS NKPPKQGAFALSALDAHLSILEKENR
Specific function: Unknown
COG id: COG3740
COG function: function code R; Phage head maturation protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37710; Mature: 37579
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKNASPNPVANAVLAMRR CEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCEECCCCCCCCCCCHHHHHHHHHHH GLMGWLLDVELDPPEFWLINAQPSPALIAALSARGATFHLCDPGMEECLARAARDGRPQS HHHEEEEEEEECCCCEEEEECCCCCHHEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCC VEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGTITAYASVFGNVDSYGDVVIP HHHHHHHHCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCEEEHHHHHCCCCCCCCEEEC GAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDAHGLKITAQLDLDNPKARQ CCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCHHHHHHCCCCEEEEEEEECCCHHHHH VYNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLYEVSVVPIGANQETSIIDVK HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEHHH AVVAEELANMLDSRQLTKSISNKPPKQGAFALSALDAHLSILEKENR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TIHVVIGPPCSGKSSFVEANAPAGIGRFDFDNIAGTVAGQDVKNASPNPVANAVLAMRR EEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHCCEECCCCCCCCCCCHHHHHHHHHHH GLMGWLLDVELDPPEFWLINAQPSPALIAALSARGATFHLCDPGMEECLARAARDGRPQS HHHEEEEEEEECCCCEEEEECCCCCHHEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCC VEDRIRQWYDNPPELPTKGGHEVKTKSYDVSIDETQTEGTITAYASVFGNVDSYGDVVIP HHHHHHHHCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCEEEHHHHHCCCCCCCCEEEC GAFEETLGEWQKSGNTIPLLYGHDFKDPFSNIGGVTSAVEDAHGLKITAQLDLDNPKARQ CCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCHHHHHHCCCCEEEEEEEECCCHHHHH VYNLLKAKRLSQMSFAFDVVEGSWGEREQQEVYELKKVKLYEVSVVPIGANQETSIIDVK HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCEEHHH AVVAEELANMLDSRQLTKSISNKPPKQGAFALSALDAHLSILEKENR HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA