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The map label for this gene is ohrR [H]

Identifier: 38232755

GI number: 38232755

Start: 107390

End: 107860

Strand: Direct

Name: ohrR [H]

Synonym: DIP0127

Alternate gene names: 38232755

Gene position: 107390-107860 (Clockwise)

Preceding gene: 38232754

Following gene: 38232758

Centisome position: 4.32

GC content: 53.93

Gene sequence:

>471_bases
ATGATTTCCACTCCACCTGTTGCGCGCAATATAATGCGGTGTATGTCTGACCAACTGAAACTGGACCAGCAGATCTGTTT
CCAGCTGTACACCGGATCGCGTCTCATGCAACGAATGTACCGCGTCTACTTCGACCAGTGGGGAATCACGTACTCCCAGT
ACTTGGTCCTATTGCTGCTATGGGAAAAAGATCGCCAGACCATCAGCGAACTGTCAGACCCCCTCGACCTAGACAGCGGT
ACCCTCTCGCCACTACTGCGGCGCATGGAGGCCAACGGTTTTATTACCCGTGAACATGAACAAAGCGACTATCGCAAAGT
AGTCGTGTGCCTGACCACCCGTGGTCGCCGGCTGAAAACCAAAGCCAAAAAAATGAACGACGAGCTCAACGACATGCTGG
GCTTTGACGACGCCGACCTCGCCGCCGTCACCCGCGTCCTAGAAAAGATCAACCCCTCCGCAGCAATCTAA

Upstream 100 bases:

>100_bases
CGTCGCACAGGGGATGACCCTGCCGGAATTCCACAGCCGTGCGCTGGCGCTGGGGTCTATCCCCATGTCGATTCTGCGAC
GTGAGATACTTCGCTAACCC

Downstream 100 bases:

>100_bases
TAAGCTGCGGCAGCCACCCTGCCAGCAACAACACACACAACAGGCGGATAATCTGCACGGCCACCACAATCGGGCCAGCA
CCGCCCTCGCTGGCAAGGGC

Product: MarR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFDQWGITYSQYLVLLLLWEKDRQTISELSDPLDLDSG
TLSPLLRRMEANGFITREHEQSDYRKVVVCLTTRGRRLKTKAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI

Sequences:

>Translated_156_residues
MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFDQWGITYSQYLVLLLLWEKDRQTISELSDPLDLDSG
TLSPLLRRMEANGFITREHEQSDYRKVVVCLTTRGRRLKTKAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI
>Mature_156_residues
MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFDQWGITYSQYLVLLLLWEKDRQTISELSDPLDLDSG
TLSPLLRRMEANGFITREHEQSDYRKVVVCLTTRGRRLKTKAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18143; Mature: 18143

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFDQWGITYSQYLVLLLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
WEKDRQTISELSDPLDLDSGTLSPLLRRMEANGFITREHEQSDYRKVVVCLTTRGRRLKT
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHEEEEEECCCCCHHHH
KAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISTPPVARNIMRCMSDQLKLDQQICFQLYTGSRLMQRMYRVYFDQWGITYSQYLVLLLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
WEKDRQTISELSDPLDLDSGTLSPLLRRMEANGFITREHEQSDYRKVVVCLTTRGRRLKT
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHEEEEEECCCCCHHHH
KAKKMNDELNDMLGFDDADLAAVTRVLEKINPSAAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]