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The map label for this gene is yfcA [H]

Identifier: 38232758

GI number: 38232758

Start: 109478

End: 110248

Strand: Direct

Name: yfcA [H]

Synonym: DIP0130

Alternate gene names: 38232758

Gene position: 109478-110248 (Clockwise)

Preceding gene: 38232755

Following gene: 38232761

Centisome position: 4.4

GC content: 60.18

Gene sequence:

>771_bases
ATGGATCTAGGACTAAGCGGCTGGGCGATACTCACCTTTGGGGCGGCCGCCGCCGGTTGGGTCGACGCTGTCATTGGCGG
CGGTGGATTGATTCTCATCCCCCTCATCATGGCCGTAGCCCCTGGGCTATTACCTGCAAATGCGCTGGCCACAAACAAAT
TTGCGGCAGTCACCGGAACATTCTCCGCGGCGGTAACCCTCGTGCGCAAAGTGGGCGTAGATACCTCCCTCGCGCTACGT
ATGATCCCCGTTGCGGCCGTGGGTTCGGGATTGGGTGCGCTGATGGCGGCGTCGATAAGCAAAGATGTAATGCGGCCAAT
CGTTATCATATTGATGCTTATCGCCGGCCTCTTTGTGGCGCTTAGACCCGATTTTGGCCAAGGCAACAGCACTCACAAAC
CATGGGGACGCGCCGTAGCCCTCATCGCCGTTGCCGCCATCGCGCTTTACGACGGCATCTTCGGCCCCGGCACCGGGATG
TTCCTCATCATGGCCTTTACCGCCTTGCTCTCCCAAGACTTCATCCGCTCCGCAGCCCTGGCAAAAGTCATCAACACCGC
CACCAACATCGGCGCCCTCTGCGTCTTCATCGCTGCAGGCCACATCCTCTGGAAACTCGGCATCATCCTCGCCATCGCCA
ACGTTGCTGGCGCACAACTAGGCGCACGCACCGTCCTCGGTGGTGGCACCCGCCTCCTGCGCGCAGCCCTGCTCACCCTC
GTCGTCGTGATGAGTATCTACCTGGCACAACAACAGTGGTTCAACGGATAG

Upstream 100 bases:

>100_bases
CACGGTGCTCACCTCCACAAGCTTGGTTACCTCCGAGCGTAGTGTGTAACCACGAACAACGCTGACAGGGCGCAGAAGAC
GAACAAAGGACAACACCCCC

Downstream 100 bases:

>100_bases
CCAACGGATCCTCCGGCCACGGATGCTTGGGGTAGCGTCCGCGCATATCGGAACGAACCTGCTGGTAGGGGCCCGCCCAG
AAACTATCTAACGTGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLPANALATNKFAAVTGTFSAAVTLVRKVGVDTSLALR
MIPVAAVGSGLGALMAASISKDVMRPIVIILMLIAGLFVALRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGM
FLIMAFTALLSQDFIRSAALAKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGARTVLGGGTRLLRAALLTL
VVVMSIYLAQQQWFNG

Sequences:

>Translated_256_residues
MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLPANALATNKFAAVTGTFSAAVTLVRKVGVDTSLALR
MIPVAAVGSGLGALMAASISKDVMRPIVIILMLIAGLFVALRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGM
FLIMAFTALLSQDFIRSAALAKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGARTVLGGGTRLLRAALLTL
VVVMSIYLAQQQWFNG
>Mature_256_residues
MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLPANALATNKFAAVTGTFSAAVTLVRKVGVDTSLALR
MIPVAAVGSGLGALMAASISKDVMRPIVIILMLIAGLFVALRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGM
FLIMAFTALLSQDFIRSAALAKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGARTVLGGGTRLLRAALLTL
VVVMSIYLAQQQWFNG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=236, Percent_Identity=38.5593220338983, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 26073; Mature: 26073

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLPANALATNKFAAVTGT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHH
FSAAVTLVRKVGVDTSLALRMIPVAAVGSGLGALMAASISKDVMRPIVIILMLIAGLFVA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGMFLIMAFTALLSQDFIRSAAL
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGARTVLGGGTRLLRAALLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHH
VVVMSIYLAQQQWFNG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLGLSGWAILTFGAAAAGWVDAVIGGGGLILIPLIMAVAPGLLPANALATNKFAAVTGT
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHH
FSAAVTLVRKVGVDTSLALRMIPVAAVGSGLGALMAASISKDVMRPIVIILMLIAGLFVA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRPDFGQGNSTHKPWGRAVALIAVAAIALYDGIFGPGTGMFLIMAFTALLSQDFIRSAAL
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AKVINTATNIGALCVFIAAGHILWKLGIILAIANVAGAQLGARTVLGGGTRLLRAALLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHH
VVVMSIYLAQQQWFNG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]