| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38232684
Identifier: 38232684
GI number: 38232684
Start: 41066
End: 42397
Strand: Direct
Name: 38232684
Synonym: DIP0047
Alternate gene names: NA
Gene position: 41066-42397 (Clockwise)
Preceding gene: 38232680
Following gene: 38232685
Centisome position: 1.65
GC content: 55.18
Gene sequence:
>1549_bases TTGAATATGTCACCGAGTATCCGCCGGGTCCCGACGGCGTCGGGTGCGACCGCTGTTCAAATAATCTGGCGCTACCGCAA CCGCAAACCCGACATCGAACACGTCGGCTCCGCCCACACCGACTACGATCTCGCAGCGCTGATGGCCAAGGCTCAGCGGC TTATCGATGGCGAGCAAATCTCACTCGACCTCAAAAATGCTGCCTTCTGCGGTTGCTGTGTCTGGAACAGGCACGGTTGA TAATCCCGTCACGGTATCCGGTGAACGCGCAGGTCTTCTCCTGGACGCGATTCGCGGGGCCTTCCAACTCCTTGGTCTGG ATGCGGCAAGCGGCGAGGATGAGGTGTTTTTCAACCTGGTTCAAGCCCGTATTATCTCGCTGGGTTCCAAATTTGATTCT ATTGAAACTCTGGCAGAAGTCGGCGTGACCTCGGCTTCATACGCGACGATAAAGCGCTACCTTCCGCGGTATGCCGACAA AGACTTCCGCGACCAGATAACCCACGCCCTAGCCACACACGCGGCCATTGGTCCTGGTGTGATGGTTCTCTACGATGTGA CGACCTTATATTTTGAAACTGACGTGCCCGACGAGCTACGCAAACCCGGGTTTAGTAAAGAACGCCGACTCGAACCCCAG ATCACTGTCGGGATGCTCACCGACTCCATCGGCTTCCCCTTGGCGATCGGTGCATTTGAAGGCAATCGTGCTGAAACGCA AACCATGTTGCCAATGATCCTGCGTCTTAAAGACGCCTACCACCTTGACGACATCACGATTGTCGCTGATGCTGGCATGT TTTCAGCCGCCAACAAGACCGCGATTATCGATGCCGGGTTGGACTACATTCTGGGCACGAAAGAACGCGAAATCCCAGAA CCAATTAAAGCCTGGCTGGATACGGTGGAAGGGCGCAGCTACACCGACTACGACGACGGACACATCTGGACCCACCGTCA CCACAGCGACAGACGCCGCACCAGCGGGACACCGCAGGCAGTGACCTATTACCAATATTCCTACGATAGGGCTCGTCGCA CAAGGCGCGGCATCGGCGAACAATTAGATAAAGCCCAGCGTGCTGTTGACGGAAAGATACCCGTCAAGCGGAATCGATAC GTCAATCTCAAGGCCCCGAATAAGCAGGTCAACCACGCCCTAGCCAACAAGCACCTGACCCTGGCGGGGATTAAAGGATA CGAGACCTCACGCACAGACTTAAAACCCCAAGAGGTCATTGGTGCCTACCGGCGCCTGTTCAAGATCGAGAAATCGTTCC GGATGGCGAAATCAGACCTGAAAGCCCGACCGATTTATCACCGTAAAGAAGACTCCATCCATGCGCACCTGACCATTGTG ATGGCCGCGATGGCCACAGGCCACGTGTTGGAAGAAGCCTCGGGCCTATCGTTGAAGCGATTGGTGCGAACCTTGAAGAA ATACCGGACGTTTACCGTCGAAATCGCAGGCCAGACCCTCCATGCACAGACCGACCTGCCCGCTGACATCCGTGAACTCG CCGAAAAGTTGCCCCAACCGTCTGACTAA
Upstream 100 bases:
>100_bases TGTGGTGTAGTTCATATTGACGTTTCTGCCTGTGGGTTTGGGTATCAGGGGGTGGGTTTTGTCTGACTAAGCGGGTAGCG GTGGGGGTGCCGGTAGTCTG
Downstream 100 bases:
>100_bases ATTGAGCCAAGTCAGGCAAACGCTAAGTTGGGAAAATAGTATGACGCATCTTTAGCTGTTGTTTATTACTTTGGGTAGAT GAACCATCTGTATTAAGTAG
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>508_residues MNMSPSIRRVPTASGATAVQIIWRYRNRKPDIEHVGSAHTDYDLAALMAKAQRLIDGEQISLDLKVSGTGTVDNPVTVSG ERAGLLLDAIRGAFQLLGLDAASGEDEVFFNLVQARIISLGSKFDSIETLAEVGVTSASYATIKRYLPRYADKDFRDQIT HALATHAAIGPGVMVLYDVTTLYFETDVPDELRKPGFSKERRLEPQITVGMLTDSIGFPLAIGAFEGNRAETQTMLPMIL RLKDAYHLDDITIVADAGMFSAANKTAIIDAGLDYILGTKEREIPEPIKAWLDTVEGRSYTDYDDGHIWTHRHHSDRRRT SGTPQAVTYYQYSYDRARRTRRGIGEQLDKAQRAVDGKIPVKRNRYVNLKAPNKQVNHALANKHLTLAGIKGYETSRTDL KPQEVIGAYRRLFKIEKSFRMAKSDLKARPIYHRKEDSIHAHLTIVMAAMATGHVLEEASGLSLKRLVRTLKKYRTFTVE IAGQTLHAQTDLPADIRELAEKLPQPSD
Sequences:
>Translated_444_residues LVRRLGQLFGEFTDVSGQVGLCMEGLACDFDGKRPVFLQGSHQSLQR*ARGFFQHVACGHRGHHNGQVRMDGVFFTVINR SGFQV*FRHPERFLDLEQAPVGTNDLLGF*VCA*GLVSFNPRQGQVLVG*GVVDLLIRGLEIDVSIPLDGYLSVNSTLGF I*LFADAAPCATSPIVGILVIGHCLRCPAGAASVAVVTVGPDVSVVVVGVAAPFHRIQPGFNWFWDFAFFRAQNVVQPGI DNRGLVGG*KHASISDNRDVVKVVGVFKTQDHWQHGLRFSTIAFKCTDRQGEADGVGEHPDSDLGFESAFFTKPGFA*LV GHVSFKI*GRHIVENHHTRTNGRVCG*GVGYLVAEVFVGIPRKVALYRRV*SRGHADFCQSFNRIKFGTQRDNTGLNQVE KHLILAACRIQTKELEGPANRVQEKTCAFTGYRDGIINRACSRH >Mature_444_residues LVRRLGQLFGEFTDVSGQVGLCMEGLACDFDGKRPVFLQGSHQSLQR*ARGFFQHVACGHRGHHNGQVRMDGVFFTVINR SGFQV*FRHPERFLDLEQAPVGTNDLLGF*VCA*GLVSFNPRQGQVLVG*GVVDLLIRGLEIDVSIPLDGYLSVNSTLGF I*LFADAAPCATSPIVGILVIGHCLRCPAGAASVAVVTVGPDVSVVVVGVAAPFHRIQPGFNWFWDFAFFRAQNVVQPGI DNRGLVGG*KHASISDNRDVVKVVGVFKTQDHWQHGLRFSTIAFKCTDRQGEADGVGEHPDSDLGFESAFFTKPGFA*LV GHVSFKI*GRHIVENHHTRTNGRVCG*GVGYLVAEVFVGIPRKVALYRRV*SRGHADFCQSFNRIKFGTQRDNTGLNQVE KHLILAACRIQTKELEGPANRVQEKTCAFTGYRDGIINRACSRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47089; Mature: 47089
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LVRRLGQLFGEFTDVSGQVGLCMEGLACDFDGKRPVFLQGSHQSLQRARGFFQHVACGHR CHHHHHHHHHHHHCCCCCCCCEECCCEECCCCCCCEEEECCHHHHHHHHHHHHHHHHCCC GHHNGQVRMDGVFFTVINRSGFQVFRHPERFLDLEQAPVGTNDLLGFVCAGLVSFNPRQG CCCCCEEEECEEEEEEECCCCCHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC QVLVGGVVDLLIRGLEIDVSIPLDGYLSVNSTLGFILFADAAPCATSPIVGILVIGHCLR CEEEHHHHHHHHCCCEEEEECCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHC CPAGAASVAVVTVGPDVSVVVVGVAAPFHRIQPGFNWFWDFAFFRAQNVVQPGIDNRGLV CCCCCCEEEEEEECCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC GGKHASISDNRDVVKVVGVFKTQDHWQHGLRFSTIAFKCTDRQGEADGVGEHPDSDLGFE CCCCCCCCCCCCEEEEEEHHCCCHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCC SAFFTKPGFALVGHVSFKIGRHIVENHHTRTNGRVCGGVGYLVAEVFVGIPRKVALYRRV CEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHCCCHHHHHHHHH SRGHADFCQSFNRIKFGTQRDNTGLNQVEKHLILAACRIQTKELEGPANRVQEKTCAFTG HCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC YRDGIINRACSRH CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA