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The map label for this gene is 38232680

Identifier: 38232680

GI number: 38232680

Start: 38634

End: 38963

Strand: Direct

Name: 38232680

Synonym: DIP0038

Alternate gene names: NA

Gene position: 38634-38963 (Clockwise)

Preceding gene: 38232679

Following gene: 38232684

Centisome position: 1.55

GC content: 44.85

Gene sequence:

>330_bases
ATGCCGAAGAAAGGTAGCGATCCGGTGTGGTGTGTGGTGATGTTTGATCTTCCGGTGAAGACAAAGACTCAGCGAAAGCA
AGCAACGGCGTTTCGTCAGAATCTTTTAGATCTTGGATTCTGTATGGCACAGCTGAGTGTATATGTGCAGTACCTGCCTC
TGGCCGCAAAGTTATCTAATTTGGTGAAATTAATTAAAGAAAAATTACCCCCAGGTGGGGATGTTCGAATCCTTTCGGTA
TCGGACATCCAATGGTCGAAGATGATCCGTTTTTCTTCTTCTGCAGAGGTTTCTGGCGAAGAAAAGCCTGATCAACTCGC
GATTTTTTAG

Upstream 100 bases:

>100_bases
TCAATTCCGACGGTTTTTACCGCGTTCGCTCAACAGTATGGGCGGTATGTGGAAGGTGATGTTGAGAAATTAGTACCGCC
TATTTGGGAAGGTCCCTTCG

Downstream 100 bases:

>100_bases
ACTTCAGGTAGCCCAAAAAACCATGTTAAACAGGATTTTTTGGGCTACCTGAAGTCTATCAGGGTTTTTGAGAACTGAAC
CCCAGTGCGGTTCAACACTC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Cas2 Family

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQLSVYVQYLPLAAKLSNLVKLIKEKLPPGGDVRILSV
SDIQWSKMIRFSSSAEVSGEEKPDQLAIF

Sequences:

>Translated_109_residues
MPKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQLSVYVQYLPLAAKLSNLVKLIKEKLPPGGDVRILSV
SDIQWSKMIRFSSSAEVSGEEKPDQLAIF
>Mature_108_residues
PKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQLSVYVQYLPLAAKLSNLVKLIKEKLPPGGDVRILSVS
DIQWSKMIRFSSSAEVSGEEKPDQLAIF

Specific function: Unknown

COG id: COG3512

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12216; Mature: 12084

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQLSVYVQYLPLAAKLSN
CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKLIKEKLPPGGDVRILSVSDIQWSKMIRFSSSAEVSGEEKPDQLAIF
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
PKKGSDPVWCVVMFDLPVKTKTQRKQATAFRQNLLDLGFCMAQLSVYVQYLPLAAKLSN
CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKLIKEKLPPGGDVRILSVSDIQWSKMIRFSSSAEVSGEEKPDQLAIF
HHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA