| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is kynB [H]
Identifier: 21675076
GI number: 21675076
Start: 2137072
End: 2137734
Strand: Reverse
Name: kynB [H]
Synonym: CT2269
Alternate gene names: 21675076
Gene position: 2137734-2137072 (Counterclockwise)
Preceding gene: 21675077
Following gene: 21675075
Centisome position: 99.2
GC content: 65.01
Gene sequence:
>663_bases ATGCACATCGTCGATCTCAGCTACCCGGTCACTGCCGACATGCCGCTCTGGCCCGGCACGCCCGCGCCGAACTTTTCCGA TCTCCACACGGTCGGGCGCGACGGCTTTGGCGAGCGGTGGCTGCAACTCTCCTCGCACACAGGCACGCACCTCGACGCTC CGGCGCACCTTTTCGAGGGCGCGGTATCGCTCGATCGCTTGCCGGTGGATCATTTCATCGGCAAGGGCGCGCTGCTCGAT CTGCGAGACGCGCAGCCGGAGCCGCTCTCGCTCGATCAACTGCTGCTCCAACGCGCAACAATCGAGTCGGCGGAGTTTCT CTTGCTGCATACCGGCTGGAGCCGATTCTGGGGAACGGCGGCGTACGACCGGGGCTATCCGGTGTTTGCGGAGGAGGCTG CGGCGTGGCTCGCCGGGCTGGGACTGAAGGGCGTCGGCATCGATGCGCCTTCGTTTGACGATCCGGATTCGGAGGAGCTG CCCATTCATCGCCGACTGCTTGGCGCAGGCTTTGTGCTGATCGAAAATCTCACCGCGCTCGACCGGCTCGGCGGTCACGA ATTTTTCCTCTCCGTGCTGCCGCTGCCCATCGCCGGAGCTGAAGCCTGCCCCGTGCGCGCGGTCGCCCTCATTGCGTCTT TTGCGGCGAACCAGCCGATTTAA
Upstream 100 bases:
>100_bases CAACGCAGGCACCAGCGAGCCGAACCGGGGTATCAACTCGAATGCCGTAGTAGTGAGCTATTCGCTGCTCTACTGACGGA TCCGCGCTGTTCGTATTGCC
Downstream 100 bases:
>100_bases CTTGCCAAATCCGCCAGACCGCGTTAGCTTTTGTGAATTTCGCAGGTTGCGCGGCCTCTTCCCCTGTCACTTCAGGTTTA TCAGTTATGGACGGTTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MHIVDLSYPVTADMPLWPGTPAPNFSDLHTVGRDGFGERWLQLSSHTGTHLDAPAHLFEGAVSLDRLPVDHFIGKGALLD LRDAQPEPLSLDQLLLQRATIESAEFLLLHTGWSRFWGTAAYDRGYPVFAEEAAAWLAGLGLKGVGIDAPSFDDPDSEEL PIHRRLLGAGFVLIENLTALDRLGGHEFFLSVLPLPIAGAEACPVRAVALIASFAANQPI
Sequences:
>Translated_220_residues MHIVDLSYPVTADMPLWPGTPAPNFSDLHTVGRDGFGERWLQLSSHTGTHLDAPAHLFEGAVSLDRLPVDHFIGKGALLD LRDAQPEPLSLDQLLLQRATIESAEFLLLHTGWSRFWGTAAYDRGYPVFAEEAAAWLAGLGLKGVGIDAPSFDDPDSEEL PIHRRLLGAGFVLIENLTALDRLGGHEFFLSVLPLPIAGAEACPVRAVALIASFAANQPI >Mature_220_residues MHIVDLSYPVTADMPLWPGTPAPNFSDLHTVGRDGFGERWLQLSSHTGTHLDAPAHLFEGAVSLDRLPVDHFIGKGALLD LRDAQPEPLSLDQLLLQRATIESAEFLLLHTGWSRFWGTAAYDRGYPVFAEEAAAWLAGLGLKGVGIDAPSFDDPDSEEL PIHRRLLGAGFVLIENLTALDRLGGHEFFLSVLPLPIAGAEACPVRAVALIASFAANQPI
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine [H]
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017484 - InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: =3.5.1.9 [H]
Molecular weight: Translated: 23775; Mature: 23775
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIVDLSYPVTADMPLWPGTPAPNFSDLHTVGRDGFGERWLQLSSHTGTHLDAPAHLFEG CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEECCCCCCCCCCCHHHHHHH AVSLDRLPVDHFIGKGALLDLRDAQPEPLSLDQLLLQRATIESAEFLLLHTGWSRFWGTA HHHHCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHCCC AYDRGYPVFAEEAAAWLAGLGLKGVGIDAPSFDDPDSEELPIHRRLLGAGFVLIENLTAL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DRLGGHEFFLSVLPLPIAGAEACPVRAVALIASFAANQPI HHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHIVDLSYPVTADMPLWPGTPAPNFSDLHTVGRDGFGERWLQLSSHTGTHLDAPAHLFEG CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEECCCCCCCCCCCHHHHHHH AVSLDRLPVDHFIGKGALLDLRDAQPEPLSLDQLLLQRATIESAEFLLLHTGWSRFWGTA HHHHCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHCCC AYDRGYPVFAEEAAAWLAGLGLKGVGIDAPSFDDPDSEELPIHRRLLGAGFVLIENLTAL CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DRLGGHEFFLSVLPLPIAGAEACPVRAVALIASFAANQPI HHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA