Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21675077

Identifier: 21675077

GI number: 21675077

Start: 2137759

End: 2138355

Strand: Reverse

Name: 21675077

Synonym: CT2270

Alternate gene names: NA

Gene position: 2138355-2137759 (Counterclockwise)

Preceding gene: 21675078

Following gene: 21675076

Centisome position: 99.23

GC content: 57.12

Gene sequence:

>597_bases
ATGAAAAAGAAGTTCTTACGTTTCTTCACCACTCTTCTGTTCGTGTGCAGTTTCATCCCCGGCAAGCTCAACGCCGCGCC
CACCGCTACTCATGATGGGGTCTATCTCGACGAAATCGCCATCGGTTCCGGCTACGCCTGGGGGCATTTGAAGTTCTCCG
AGGCAGATTATAATGCGGTGCCGATTTTTGCGCGCTTCGGGTTCAACATGAACTCCGTGTTTGGCATGAAGGAGAGCAAG
AGCACGCTTCAGCTCGCGCTCGAACCGTTCTGCAATCCCGTCACTGAACCCGACTCGGGCGTGGAGACGGGCCTCAATGT
TTTCATCCGTTATCTCCAGCCGGTCGCGCCCTCGGTGAAGCTGGTCGGTGAAATCGGTTCCGGCCCGATGTACCTGAGCA
TCAACAGCGCGGAGCAAGGCAAGGCGGGCTTCAATTTTCTGAACCAGTTCGGTCTCGGCGCGCAGGTTGCCGTCTCCCCG
AAAAGCGCCATCACCGTTGGCTACCGTTTCCGCCACCTCTCCAACGCAGGCACCAGCGAGCCGAACCGGGGTATCAACTC
GAATGCCGTAGTAGTGAGCTATTCGCTGCTCTACTGA

Upstream 100 bases:

>100_bases
ACCAGATTTTCTGCGACTGTGAACGCAAGGCTGCCGTTGATGCTGTTGTCAGCTTTGTCTCCAAACGTTTTCCCGCTGCA
ACCAATCAATCAGTAAAAGC

Downstream 100 bases:

>100_bases
CGGATCCGCGCTGTTCGTATTGCCATGCACATCGTCGATCTCAGCTACCCGGTCACTGCCGACATGCCGCTCTGGCCCGG
CACGCCCGCGCCGAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKKFLRFFTTLLFVCSFIPGKLNAAPTATHDGVYLDEIAIGSGYAWGHLKFSEADYNAVPIFARFGFNMNSVFGMKESK
STLQLALEPFCNPVTEPDSGVETGLNVFIRYLQPVAPSVKLVGEIGSGPMYLSINSAEQGKAGFNFLNQFGLGAQVAVSP
KSAITVGYRFRHLSNAGTSEPNRGINSNAVVVSYSLLY

Sequences:

>Translated_198_residues
MKKKFLRFFTTLLFVCSFIPGKLNAAPTATHDGVYLDEIAIGSGYAWGHLKFSEADYNAVPIFARFGFNMNSVFGMKESK
STLQLALEPFCNPVTEPDSGVETGLNVFIRYLQPVAPSVKLVGEIGSGPMYLSINSAEQGKAGFNFLNQFGLGAQVAVSP
KSAITVGYRFRHLSNAGTSEPNRGINSNAVVVSYSLLY
>Mature_198_residues
MKKKFLRFFTTLLFVCSFIPGKLNAAPTATHDGVYLDEIAIGSGYAWGHLKFSEADYNAVPIFARFGFNMNSVFGMKESK
STLQLALEPFCNPVTEPDSGVETGLNVFIRYLQPVAPSVKLVGEIGSGPMYLSINSAEQGKAGFNFLNQFGLGAQVAVSP
KSAITVGYRFRHLSNAGTSEPNRGINSNAVVVSYSLLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21452; Mature: 21452

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKFLRFFTTLLFVCSFIPGKLNAAPTATHDGVYLDEIAIGSGYAWGHLKFSEADYNAV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCE
PIFARFGFNMNSVFGMKESKSTLQLALEPFCNPVTEPDSGVETGLNVFIRYLQPVAPSVK
EEEEECCCCCHHEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
LVGEIGSGPMYLSINSAEQGKAGFNFLNQFGLGAQVAVSPKSAITVGYRFRHLSNAGTSE
EEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEHHHEEECCCCCCCC
PNRGINSNAVVVSYSLLY
CCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKKFLRFFTTLLFVCSFIPGKLNAAPTATHDGVYLDEIAIGSGYAWGHLKFSEADYNAV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCE
PIFARFGFNMNSVFGMKESKSTLQLALEPFCNPVTEPDSGVETGLNVFIRYLQPVAPSVK
EEEEECCCCCHHEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
LVGEIGSGPMYLSINSAEQGKAGFNFLNQFGLGAQVAVSPKSAITVGYRFRHLSNAGTSE
EEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCEEEEHHHEEECCCCCCCC
PNRGINSNAVVVSYSLLY
CCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA