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The map label for this gene is dsrM [H]

Identifier: 21675053

GI number: 21675053

Start: 2107210

End: 2108205

Strand: Reverse

Name: dsrM [H]

Synonym: CT2244

Alternate gene names: 21675053

Gene position: 2108205-2107210 (Counterclockwise)

Preceding gene: 21675054

Following gene: 21675052

Centisome position: 97.83

GC content: 54.42

Gene sequence:

>996_bases
ATGAAAAAAGTGCTGAAACCGTTGATCGCAGTGATCGTGCTGGCCCTGATTCCCTGGGCTGGCATCACCTACGGCAAGCT
CGACTATCTTTTCGCCATCGTCATCCCTTATGCCTCCGCAGCCATTCTCGTGCTCGGTATGCTTTTCCGGCTGGTTGACT
GGATCCGGAGGCCGGTACCCTTCAACATTCCGACCACCTGCGGCCAGGAGCAGTCGCTCGACTGGATCAAGACCAATCCG
CTGGAGTGCCCGTCAAATCCCTTCATGGCCGCGATGCGGGTGCTCTCCGAAGTCTTCCTGTTCCGCTCGCTGTTCCGAAA
CACCAGGGCTGAGCTGTATGGCGGCCCGAAGCTCGTCTATGGTTCGTACAAATGGCTTTGGCTTGGCGGTCTCGCGTTTC
ACTGGTCGATGCTCATCATTGTTATTCGCCATGCGCGCTTTTTCCTTGAGACACTGCCCTTGCCAATCGAATTGCTTGAA
AATGCGGATCGCTTTCTCGATGTGACCGTGCCGGCATTTTACATCACTGACGCCATAGCGCTTGCTGCTATCACTTTCCT
AGTGCTGCGCCGCCTGTCGGACGAAAAGATGCGGATTCTGTCTCTTTCGACAGACTATTTTCCGCTGTTCCTGTTCGGCG
CCATCGTTGTTATCGGCATCAGCATGCGCTACGTGACCAAAATCGACATCATGCCGGTCAAAGCGTTGGCCATGACACTG
GCTCACTTCGGTTTCGACGCGCCCGAACCGATAGGTGTCCTGTTCTATATCCACCTGTTCCTGGTTTGCGTGCTGCTCGC
CTACATTCCGTTCAGCAAGCTGGTGCATATGGGCGGAATTTTCCTCAGCCCAACGCGCAACCTGCCGAACAACAGCCGCG
CCAAACGGCACAAGAATCCGTGGAATCCCGATATCAAGTTCAGGACTTATGCCGAATACGAAGACGAGTTCCGCGAAAAA
ATGAAAAAGGCGGGTCTTCCGGTCGAAAAGCAATAA

Upstream 100 bases:

>100_bases
AAGCTTTTGATAGCTACATGAAGCACCGGGAGACTATCTACCAGATCAAGTATGACGAGGCCCGCCGGAAAATGCACATG
GCGCTCAGGAGGGCTGAAGC

Downstream 100 bases:

>100_bases
TCAATTATGTCCAACAAATACGCCCTCAAACCAGACGAACTCAAAAAAGAGTTCGAACAAAAGAAGCCACGGCTCCTCAA
GGGGGAGTTCGCCGGCAAGG

Product: DsrM protein

Products: NA

Alternate protein names: Hme subunit C [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKKVLKPLIAVIVLALIPWAGITYGKLDYLFAIVIPYASAAILVLGMLFRLVDWIRRPVPFNIPTTCGQEQSLDWIKTNP
LECPSNPFMAAMRVLSEVFLFRSLFRNTRAELYGGPKLVYGSYKWLWLGGLAFHWSMLIIVIRHARFFLETLPLPIELLE
NADRFLDVTVPAFYITDAIALAAITFLVLRRLSDEKMRILSLSTDYFPLFLFGAIVVIGISMRYVTKIDIMPVKALAMTL
AHFGFDAPEPIGVLFYIHLFLVCVLLAYIPFSKLVHMGGIFLSPTRNLPNNSRAKRHKNPWNPDIKFRTYAEYEDEFREK
MKKAGLPVEKQ

Sequences:

>Translated_331_residues
MKKVLKPLIAVIVLALIPWAGITYGKLDYLFAIVIPYASAAILVLGMLFRLVDWIRRPVPFNIPTTCGQEQSLDWIKTNP
LECPSNPFMAAMRVLSEVFLFRSLFRNTRAELYGGPKLVYGSYKWLWLGGLAFHWSMLIIVIRHARFFLETLPLPIELLE
NADRFLDVTVPAFYITDAIALAAITFLVLRRLSDEKMRILSLSTDYFPLFLFGAIVVIGISMRYVTKIDIMPVKALAMTL
AHFGFDAPEPIGVLFYIHLFLVCVLLAYIPFSKLVHMGGIFLSPTRNLPNNSRAKRHKNPWNPDIKFRTYAEYEDEFREK
MKKAGLPVEKQ
>Mature_331_residues
MKKVLKPLIAVIVLALIPWAGITYGKLDYLFAIVIPYASAAILVLGMLFRLVDWIRRPVPFNIPTTCGQEQSLDWIKTNP
LECPSNPFMAAMRVLSEVFLFRSLFRNTRAELYGGPKLVYGSYKWLWLGGLAFHWSMLIIVIRHARFFLETLPLPIELLE
NADRFLDVTVPAFYITDAIALAAITFLVLRRLSDEKMRILSLSTDYFPLFLFGAIVVIGISMRYVTKIDIMPVKALAMTL
AHFGFDAPEPIGVLFYIHLFLVCVLLAYIPFSKLVHMGGIFLSPTRNLPNNSRAKRHKNPWNPDIKFRTYAEYEDEFREK
MKKAGLPVEKQ

Specific function: Has menaquinol-oxidizing activity. HmeC and hmeD subunits may together mediate electron transfer from menaquinol to an unidentified electron acceptor on the cytoplasmic side of the membrane [H]

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: NA

Molecular weight: Translated: 37894; Mature: 37894

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLKPLIAVIVLALIPWAGITYGKLDYLFAIVIPYASAAILVLGMLFRLVDWIRRPVP
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FNIPTTCGQEQSLDWIKTNPLECPSNPFMAAMRVLSEVFLFRSLFRNTRAELYGGPKLVY
CCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
GSYKWLWLGGLAFHWSMLIIVIRHARFFLETLPLPIELLENADRFLDVTVPAFYITDAIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHEEHHHHHHHHHHHHH
LAAITFLVLRRLSDEKMRILSLSTDYFPLFLFGAIVVIGISMRYVTKIDIMPVKALAMTL
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AHFGFDAPEPIGVLFYIHLFLVCVLLAYIPFSKLVHMGGIFLSPTRNLPNNSRAKRHKNP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHCCCC
WNPDIKFRTYAEYEDEFREKMKKAGLPVEKQ
CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKVLKPLIAVIVLALIPWAGITYGKLDYLFAIVIPYASAAILVLGMLFRLVDWIRRPVP
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FNIPTTCGQEQSLDWIKTNPLECPSNPFMAAMRVLSEVFLFRSLFRNTRAELYGGPKLVY
CCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
GSYKWLWLGGLAFHWSMLIIVIRHARFFLETLPLPIELLENADRFLDVTVPAFYITDAIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHEEHHHHHHHHHHHHH
LAAITFLVLRRLSDEKMRILSLSTDYFPLFLFGAIVVIGISMRYVTKIDIMPVKALAMTL
HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
AHFGFDAPEPIGVLFYIHLFLVCVLLAYIPFSKLVHMGGIFLSPTRNLPNNSRAKRHKNP
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHCCCC
WNPDIKFRTYAEYEDEFREKMKKAGLPVEKQ
CCCCCCEEEHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475; 11952791 [H]