Definition Chlorobium tepidum TLS, complete genome.
Accession NC_002932
Length 2,154,946

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The map label for this gene is 21675025

Identifier: 21675025

GI number: 21675025

Start: 2085334

End: 2085915

Strand: Reverse

Name: 21675025

Synonym: CT2216

Alternate gene names: NA

Gene position: 2085915-2085334 (Counterclockwise)

Preceding gene: 21675028

Following gene: 21675024

Centisome position: 96.8

GC content: 53.26

Gene sequence:

>582_bases
TTGATTTTATTATCCAACGAAAAAATGGTTGCCATGATGAAGAGAGTACATTTGATGCGGGCGCTGCTGATTGCTTTGGC
GGCGGTGACAATGCTTTTTGGAACGGCTCGTGCGGGCTGGGATCCGGCTGACGAGGTTAATGCCGAGCGGACAATAGGGA
TGTTCAGGAAAGCTGATCCGTCTCTTGAGCGTTTCTTTTCAAAGGCTTATGGTTATGCGGTTTTTTCTGATATCTACAAG
GGCGGGTTCATGATCGTCGGCGGCGGTCACGGCAAAGGGGTGGTTTTCGATCAGGGACGGCCCATTGGCCATGCGACTGT
GACGATGTTCAATGTTGGGCCTCAGCTCGGCGGACAATCATTTTCCGAGATCATTTTCTTCAAGGACCGGGCGGCGCTTG
CTGACTTCACCAAAGGCAATTACGAGCTGAGCGCTCAGTTTGCTGTTGTTGCCGTCAGGGCCGGCATGGCCACCAATACC
GACTACTCGAACGGCGTGGCCGTTTTTGCCATGCCTAACGCGGGCTTGATGGGAGAACTCACTGTTGGCGCCCAGAAGTT
CACTTTCAGGCAGTACCGGTGA

Upstream 100 bases:

>100_bases
CAATTGATTTTTCGGTTTTTTACGCTCTGACGCGATCCGGGTTTTCAGGCTGGAAAATCGTACATTATAAGCTGGTGTTG
CGTTGCAACTTTTTGCCGGT

Downstream 100 bases:

>100_bases
TTCGACCGGCATTCGACAAGGTTTTTATCACTATCTCATTTTCTGATGAACTATGAAATTGTCGTGGGCCTCGAGGTCCA
CTGTCAGCTCAATACCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADPSLERFFSKAYGYAVFSDIYK
GGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQSFSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNT
DYSNGVAVFAMPNAGLMGELTVGAQKFTFRQYR

Sequences:

>Translated_193_residues
MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADPSLERFFSKAYGYAVFSDIYK
GGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQSFSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNT
DYSNGVAVFAMPNAGLMGELTVGAQKFTFRQYR
>Mature_193_residues
MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADPSLERFFSKAYGYAVFSDIYK
GGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQSFSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNT
DYSNGVAVFAMPNAGLMGELTVGAQKFTFRQYR

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20976; Mature: 20976

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCH
SLERFFSKAYGYAVFSDIYKGGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQS
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCC
FSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNTDYSNGVAVFAMPNAGLMGEL
HHHEEEEECCHHHHHCCCCCEEEEHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE
TVGAQKFTFRQYR
ECCCCCCEEECCC
>Mature Secondary Structure
MILLSNEKMVAMMKRVHLMRALLIALAAVTMLFGTARAGWDPADEVNAERTIGMFRKADP
CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCH
SLERFFSKAYGYAVFSDIYKGGFMIVGGGHGKGVVFDQGRPIGHATVTMFNVGPQLGGQS
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCC
FSEIIFFKDRAALADFTKGNYELSAQFAVVAVRAGMATNTDYSNGVAVFAMPNAGLMGEL
HHHEEEEECCHHHHHCCCCCEEEEHHEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEE
TVGAQKFTFRQYR
ECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA