| Definition | Chlorobium tepidum TLS, complete genome. |
|---|---|
| Accession | NC_002932 |
| Length | 2,154,946 |
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The map label for this gene is fusA-1 [H]
Identifier: 21675001
GI number: 21675001
Start: 2066057
End: 2068171
Strand: Reverse
Name: fusA-1 [H]
Synonym: CT2192
Alternate gene names: 21675001
Gene position: 2068171-2066057 (Counterclockwise)
Preceding gene: 21675002
Following gene: 21675000
Centisome position: 95.97
GC content: 54.23
Gene sequence:
>2115_bases ATGGCACGGCAGGTTGCGTTAGATAGAGTCAGAAATATTGGTATCATGGCCCACATCGATGCGGGCAAGACCACGACGAC AGAGAGGATTCTCTATTACACGGGTCGCCTGCACAAGATGGGCGAGGTGCATGAAGGTGGCGCCACCATGGACTGGATGG AGCAGGAGAAGGAGCGTGGTATCACGATTACTTCCGCTGCGACAACCTGTTTTTGGACTCCGAAATACGGCAATTACGCC GGTCTCAATCACAGGATCAATATTATTGATACTCCCGGCCACGTTGACTTCACGGTCGAGGTGGAGCGTTCCCTTCGTGT GCTCGATGGAGCGGTTGCGCTATTCTGTGCTGTGGGCGGTGTCGAGCCCCAGTCTGAAACCGTCTGGCGTCAGGCTAACA AGTATGGCGTTCCGAGGATCGCCTATGTTAACAAGATGGATCGCGTCGGCGCGAATTTCTTCGAGACTGTCAAGGCTATT CGCGAGCGTCTCGGTGCCAACCCGGTACCGATTCAGATCCCGATCGGTCAGGGCGAGGTCTTCGCCGGCTTCGTCGATCT GATCCGCATGAAGGGGATTATCTACGACAAGGAAGATGGTAGCACCTACACCGAAGTTGAAATTCCGCACGATCTTGAAA ACGAGGCTCGCACCTGGCGCATCAACATGCTTGAGGCTGTTTCCGAGCTCGACGAGACCCTTCTTGAAAAATATCTTAAC GGTGAGGACATTACTGAAGAGGAGATCCGCACCGTGCTTCGCCAGGCTACCCTGGGTGTGACTATCGTTCCGGTGCTCTG CGGTTCGTCCTTCAAGAACAAGGGCGTGCAGTTCATGCTGGATGCCGTGATCGATTACCTGGCTTCGCCGGTCGATGATG GTGAAGTGGAGGGGCATGATCCGAAAACTGAAGAACCGATCGTCCGTCAGCCGAAAGACGAGGAGCCGTTCGCTGCGCTT GCTTTCAAGATTGCGACCGATCCGTTCGTCGGCAAGCTTACCTTCTTCCGGGTCTATTCAGGCGTGCTCAATGCAGGCAG CTACGTGCTCAACTCGACTACCGGCAAAAAGGAGCGTGTTGGTCGCGTTTTGCAGATGCACTCCAACAAGCGCGAGGAGC GTGATGCTGTGTATGCTGGCGATATCGCCGCTGCCGTTGGTCTCAAGGATGTGAGGACCGGTGATACGCTCTGCGACGAA AGCAAGCCGATTGTACTTGAAAAGATGGTTTTCCCCGAACCGGTTATCGAGATTGCGGTTGAGCCAAAAACCAAGGCGGA TAATGACAAACTCGGCATGTCTCTTGCCAAGCTTGCCGAAGAGGATCCGACCTTTAGGGTGAAAACTGATGAGGAAACCG GTCAGACGCTTATCGCGGGTATGGGTGAGCTTCATCTCGAAATTCTGGTTGATCGTCTGAAGCGCGAATTCAAGGTCGAG GCCAACGTTGGTCAGCCGCAGGTGGCCTATCGCGAAACCATTCGCGGTACGGTTGAATACGAAGGCAAGTTTGTTCGCCA GTCTGGCGGTAAAGGTCAGTTCGGTCTGGTTGTGCTTAGGGTTGAGCCGCTCGAAGAGGGCAAAGGCTATGAGTTTGTCG ATGAGATCAAGGGTGGCGTGATTCCGAAAGAGTATATCCCCGCAGTCAACGCAGGTATCCAGGAGGCAATGAAAGACGGT GTTGTCGCCGGCTTTCCGATGCAGGATATCAAGGTTACACTGATCGACGGTAAGTACCACGAGGTTGACTCTTCGGAAAT GGCATTCAAGATTGCAGGTTCAATCGGCTTCAAGGGTGCGGCCAAAAAGGCCAATCCGGTGCTGCTCGAACCGATTATGA AGGTTGAGGTCATCACTCCGGAAGAGTATCTCGGCGATGTGATGGGTGATCTCTCGGGACGTCGCGGTCACATCGAAGGC ATGGGTCAGCGTGCTGGTGCCCAGTTTGTCAGCGCAAAAGTGCCGCTGTCTCAAATGTTCGGCTACTCGACTGATCTCCG ATCGATGACTCAGGGCCGCGCGAACTACTCGATGGAGTTCGAGAGCTATCGCGAGGTTCCTCGCAACATCGCCGAAGCAC TGCAAGAGAAGAGGGTTGGCAAGGATTCCGAATAA
Upstream 100 bases:
>100_bases GTGACGAGGTGCATCGCATGGCTGAGGCCAACAAGGCATTTGCTCACTTCAGGTTCTGAGTCTGTAGGCAAGAAAGAATT ACTTAAAAAACGATCGATTT
Downstream 100 bases:
>100_bases CAGTTTTTCATCACCGCATTACTAAACAGATAACCGACAGGGAGAAGAGTTATGGCTAAAGAGTCATACAAGAGGGATAA ACCTCACGTAAATATTGGTA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MARQVALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVHEGGATMDWMEQEKERGITITSAATTCFWTPKYGNYA GLNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAI RERLGANPVPIQIPIGQGEVFAGFVDLIRMKGIIYDKEDGSTYTEVEIPHDLENEARTWRINMLEAVSELDETLLEKYLN GEDITEEEIRTVLRQATLGVTIVPVLCGSSFKNKGVQFMLDAVIDYLASPVDDGEVEGHDPKTEEPIVRQPKDEEPFAAL AFKIATDPFVGKLTFFRVYSGVLNAGSYVLNSTTGKKERVGRVLQMHSNKREERDAVYAGDIAAAVGLKDVRTGDTLCDE SKPIVLEKMVFPEPVIEIAVEPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVE ANVGQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGVIPKEYIPAVNAGIQEAMKDG VVAGFPMQDIKVTLIDGKYHEVDSSEMAFKIAGSIGFKGAAKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEG MGQRAGAQFVSAKVPLSQMFGYSTDLRSMTQGRANYSMEFESYREVPRNIAEALQEKRVGKDSE
Sequences:
>Translated_704_residues MARQVALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVHEGGATMDWMEQEKERGITITSAATTCFWTPKYGNYA GLNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAI RERLGANPVPIQIPIGQGEVFAGFVDLIRMKGIIYDKEDGSTYTEVEIPHDLENEARTWRINMLEAVSELDETLLEKYLN GEDITEEEIRTVLRQATLGVTIVPVLCGSSFKNKGVQFMLDAVIDYLASPVDDGEVEGHDPKTEEPIVRQPKDEEPFAAL AFKIATDPFVGKLTFFRVYSGVLNAGSYVLNSTTGKKERVGRVLQMHSNKREERDAVYAGDIAAAVGLKDVRTGDTLCDE SKPIVLEKMVFPEPVIEIAVEPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVE ANVGQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGVIPKEYIPAVNAGIQEAMKDG VVAGFPMQDIKVTLIDGKYHEVDSSEMAFKIAGSIGFKGAAKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEG MGQRAGAQFVSAKVPLSQMFGYSTDLRSMTQGRANYSMEFESYREVPRNIAEALQEKRVGKDSE >Mature_703_residues ARQVALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVHEGGATMDWMEQEKERGITITSAATTCFWTPKYGNYAG LNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGGVEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAIR ERLGANPVPIQIPIGQGEVFAGFVDLIRMKGIIYDKEDGSTYTEVEIPHDLENEARTWRINMLEAVSELDETLLEKYLNG EDITEEEIRTVLRQATLGVTIVPVLCGSSFKNKGVQFMLDAVIDYLASPVDDGEVEGHDPKTEEPIVRQPKDEEPFAALA FKIATDPFVGKLTFFRVYSGVLNAGSYVLNSTTGKKERVGRVLQMHSNKREERDAVYAGDIAAAVGLKDVRTGDTLCDES KPIVLEKMVFPEPVIEIAVEPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVEA NVGQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGVIPKEYIPAVNAGIQEAMKDGV VAGFPMQDIKVTLIDGKYHEVDSSEMAFKIAGSIGFKGAAKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEGM GQRAGAQFVSAKVPLSQMFGYSTDLRSMTQGRANYSMEFESYREVPRNIAEALQEKRVGKDSE
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=692, Percent_Identity=43.3526011560694, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI19923640, Length=733, Percent_Identity=38.7448840381992, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI25306287, Length=733, Percent_Identity=36.5620736698499, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI25306283, Length=452, Percent_Identity=41.1504424778761, Blast_Score=306, Evalue=4e-83, Organism=Homo sapiens, GI4503483, Length=419, Percent_Identity=28.6396181384248, Blast_Score=114, Evalue=4e-25, Organism=Homo sapiens, GI94966754, Length=142, Percent_Identity=38.0281690140845, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI157426893, Length=146, Percent_Identity=33.5616438356164, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI310132016, Length=123, Percent_Identity=36.5853658536585, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI310110807, Length=123, Percent_Identity=36.5853658536585, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI310123363, Length=123, Percent_Identity=36.5853658536585, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=64.4886363636364, Blast_Score=913, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=487, Percent_Identity=27.3100616016427, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI48994988, Length=145, Percent_Identity=40, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1788922, Length=146, Percent_Identity=36.3013698630137, Blast_Score=89, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17533571, Length=688, Percent_Identity=42.8779069767442, Blast_Score=534, Evalue=1e-152, Organism=Caenorhabditis elegans, GI17556745, Length=729, Percent_Identity=28.2578875171468, Blast_Score=313, Evalue=2e-85, Organism=Caenorhabditis elegans, GI17506493, Length=496, Percent_Identity=27.0161290322581, Blast_Score=113, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17557151, Length=165, Percent_Identity=36.3636363636364, Blast_Score=96, Evalue=9e-20, Organism=Caenorhabditis elegans, GI71988819, Length=144, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71988811, Length=144, Percent_Identity=31.9444444444444, Blast_Score=77, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=703, Percent_Identity=39.6870554765292, Blast_Score=530, Evalue=1e-151, Organism=Saccharomyces cerevisiae, GI6322359, Length=789, Percent_Identity=32.8263624841572, Blast_Score=387, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6324707, Length=800, Percent_Identity=25.875, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320593, Length=800, Percent_Identity=25.875, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323320, Length=164, Percent_Identity=35.3658536585366, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=147, Percent_Identity=36.0544217687075, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582462, Length=693, Percent_Identity=44.7330447330447, Blast_Score=573, Evalue=1e-163, Organism=Drosophila melanogaster, GI221458488, Length=730, Percent_Identity=31.2328767123288, Blast_Score=342, Evalue=4e-94, Organism=Drosophila melanogaster, GI24585709, Length=827, Percent_Identity=25.6348246674728, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI24585711, Length=827, Percent_Identity=25.6348246674728, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI24585713, Length=827, Percent_Identity=25.6348246674728, Blast_Score=183, Evalue=4e-46, Organism=Drosophila melanogaster, GI78706572, Length=165, Percent_Identity=33.9393939393939, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI28574573, Length=143, Percent_Identity=34.2657342657343, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77953; Mature: 77822
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARQVALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVHEGGATMDWMEQEKERG CCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHCC ITITSAATTCFWTPKYGNYAGLNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGG EEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCC VEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAIRERLGANPVPIQIPIGQGEV CCCCHHHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEECCCCCH FAGFVDLIRMKGIIYDKEDGSTYTEVEIPHDLENEARTWRINMLEAVSELDETLLEKYLN HHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC GEDITEEEIRTVLRQATLGVTIVPVLCGSSFKNKGVQFMLDAVIDYLASPVDDGEVEGHD CCCCCHHHHHHHHHHHHCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PKTEEPIVRQPKDEEPFAALAFKIATDPFVGKLTFFRVYSGVLNAGSYVLNSTTGKKERV CCCCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH GRVLQMHSNKREERDAVYAGDIAAAVGLKDVRTGDTLCDESKPIVLEKMVFPEPVIEIAV HHHHHHHCCCCHHHCCEEECCHHHHHCCCCCCCCCCCCCCCCCEEEEHHCCCCCEEEEEE EPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVE CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE ANVGQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGV CCCCCCHHHHHHHHCCEEEECCEEEECCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCC IPKEYIPAVNAGIQEAMKDGVVAGFPMQDIKVTLIDGKYHEVDSSEMAFKIAGSIGFKGA CCHHHHCHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC AKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEGMGQRAGAQFVSAKVPLSQMF CCCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHCCCCCHHHHC GYSTDLRSMTQGRANYSMEFESYREVPRNIAEALQEKRVGKDSE CCCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ARQVALDRVRNIGIMAHIDAGKTTTTERILYYTGRLHKMGEVHEGGATMDWMEQEKERG CCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHCC ITITSAATTCFWTPKYGNYAGLNHRINIIDTPGHVDFTVEVERSLRVLDGAVALFCAVGG EEEEECCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHCC VEPQSETVWRQANKYGVPRIAYVNKMDRVGANFFETVKAIRERLGANPVPIQIPIGQGEV CCCCHHHHHHHHHHCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEECCCCCH FAGFVDLIRMKGIIYDKEDGSTYTEVEIPHDLENEARTWRINMLEAVSELDETLLEKYLN HHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC GEDITEEEIRTVLRQATLGVTIVPVLCGSSFKNKGVQFMLDAVIDYLASPVDDGEVEGHD CCCCCHHHHHHHHHHHHCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC PKTEEPIVRQPKDEEPFAALAFKIATDPFVGKLTFFRVYSGVLNAGSYVLNSTTGKKERV CCCCCCCCCCCCCCCCHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH GRVLQMHSNKREERDAVYAGDIAAAVGLKDVRTGDTLCDESKPIVLEKMVFPEPVIEIAV HHHHHHHCCCCHHHCCEEECCHHHHHCCCCCCCCCCCCCCCCCEEEEHHCCCCCEEEEEE EPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVE CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE ANVGQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGV CCCCCCHHHHHHHHCCEEEECCEEEECCCCCCCEEEEEEEEECCCCCCCCCHHHHHCCCC IPKEYIPAVNAGIQEAMKDGVVAGFPMQDIKVTLIDGKYHEVDSSEMAFKIAGSIGFKGA CCHHHHCHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCC AKKANPVLLEPIMKVEVITPEEYLGDVMGDLSGRRGHIEGMGQRAGAQFVSAKVPLSQMF CCCCCCEEECCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHCHHHHCCCCCHHHHC GYSTDLRSMTQGRANYSMEFESYREVPRNIAEALQEKRVGKDSE CCCHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA